RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 BOLA3Q53S33 107 aa21.25■□□□□ 0.99
TUBGCP3-204ENST00000464139 PPP6R3Q5H9R7 873 aaPredicted RBP21.25■□□□□ 0.99
TUBGCP3-204ENST00000464139 ZNF618Q5T7W0 954 aa21.25■□□□□ 0.99
TUBGCP3-204ENST00000464139 CGB2Q6NT52 195 aa21.25■□□□□ 0.99
TUBGCP3-204ENST00000464139 PCDH19Q8TAB3 1148 aa21.25■□□□□ 0.99
TUBGCP3-204ENST00000464139 DENND1AQ8TEH3 1009 aa21.25■□□□□ 0.99
TUBGCP3-204ENST00000464139 CNTN3Q9P232 1028 aa21.25■□□□□ 0.99
TUBGCP3-204ENST00000464139 CPA4Q9UI42 421 aa21.25■□□□□ 0.99
TUBGCP3-204ENST00000464139 DNAH12Q6ZR08 3092 aa21.25■□□□□ 0.99
TUBGCP3-204ENST00000464139 SCN4AP35499 1836 aa21.24■□□□□ 0.99
TUBGCP3-204ENST00000464139 SPTLC1O15269 473 aa21.24■□□□□ 0.99
TUBGCP3-204ENST00000464139 ASMTLO95671 621 aa21.24■□□□□ 0.99
TUBGCP3-204ENST00000464139 F2P00734 622 aa21.24■□□□□ 0.99
TUBGCP3-204ENST00000464139 ATXN1P54253 815 aaKnown RBP21.24■□□□□ 0.99
TUBGCP3-204ENST00000464139 HDAC4P56524 1084 aa21.24■□□□□ 0.99
TUBGCP3-204ENST00000464139 RNASELQ05823 741 aaKnown RBP21.24■□□□□ 0.99
TUBGCP3-204ENST00000464139 FAM47EQ6ZV65 393 aa21.24■□□□□ 0.99
TUBGCP3-204ENST00000464139 SPATA21Q7Z572 469 aa21.24■□□□□ 0.99
TUBGCP3-204ENST00000464139 MAGEB5Q9BZ81 275 aa21.24■□□□□ 0.99
TUBGCP3-204ENST00000464139 USP29Q9HBJ7 922 aa21.24■□□□□ 0.99
TUBGCP3-204ENST00000464139 GOLGA2P5Q9HBQ8 144 aa21.24■□□□□ 0.99
TUBGCP3-204ENST00000464139 RALGAPA2Q2PPJ7 1873 aa21.24■□□□□ 0.99
TUBGCP3-204ENST00000464139 TRIP12Q14669 1992 aaPredicted RBP21.24■□□□□ 0.99
TUBGCP3-204ENST00000464139 SMIM35A0A1B0GVV1 85 aa21.24■□□□□ 0.99
TUBGCP3-204ENST00000464139 UNCXA6NJT0 531 aa21.24■□□□□ 0.99
TUBGCP3-204ENST00000464139 SUN1O94901 812 aa21.24■□□□□ 0.99
TUBGCP3-204ENST00000464139 PDK2Q15119 407 aa21.24■□□□□ 0.99
TUBGCP3-204ENST00000464139 SPRYD7Q5W111 196 aa21.24■□□□□ 0.99
TUBGCP3-204ENST00000464139 SPOCK2Q92563 424 aa21.24■□□□□ 0.99
TUBGCP3-204ENST00000464139 PAFAH2Q99487 392 aa21.24■□□□□ 0.99
TUBGCP3-204ENST00000464139 GRID1Q9ULK0 1009 aa21.24■□□□□ 0.99
TUBGCP3-204ENST00000464139 GNEQ9Y223 722 aaKnown RBP21.24■□□□□ 0.99
TUBGCP3-204ENST00000464139 SMIM28A0A1B0GU29 152 aa21.23■□□□□ 0.99
TUBGCP3-204ENST00000464139 APOL1O14791 398 aa21.23■□□□□ 0.99
TUBGCP3-204ENST00000464139 KCNN4O15554 427 aa21.23■□□□□ 0.99
TUBGCP3-204ENST00000464139 PRPF4O43172 522 aaKnown RBP eCLIP21.23■□□□□ 0.995e-7■■■■■ 32.1
TUBGCP3-204ENST00000464139 AVILO75366 819 aa21.23■□□□□ 0.99
TUBGCP3-204ENST00000464139 SETSIPP0DME0 302 aa21.23■□□□□ 0.99
TUBGCP3-204ENST00000464139 LCP1P13796 627 aa21.23■□□□□ 0.99
TUBGCP3-204ENST00000464139 CA4P22748 312 aa21.23■□□□□ 0.99
TUBGCP3-204ENST00000464139 ELK3P41970 407 aa21.23■□□□□ 0.99
TUBGCP3-204ENST00000464139 BCAR1P56945 870 aa21.23■□□□□ 0.99
TUBGCP3-204ENST00000464139 OLFML2BQ68BL8 750 aa21.23■□□□□ 0.99
TUBGCP3-204ENST00000464139 KBTBD7Q8WVZ9 684 aa21.23■□□□□ 0.99
TUBGCP3-204ENST00000464139 ACSS3Q9H6R3 686 aa21.23■□□□□ 0.99
TUBGCP3-204ENST00000464139 SLC5A4Q9NY91 659 aa21.23■□□□□ 0.99
TUBGCP3-204ENST00000464139 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.23■□□□□ 0.995e-7■■■■■ 38.3
TUBGCP3-204ENST00000464139 FLRT1Q9NZU1 646 aa21.23■□□□□ 0.99
TUBGCP3-204ENST00000464139 MBLAC1A4D2B0 266 aaPredicted RBP21.23■□□□□ 0.99
TUBGCP3-204ENST00000464139 SLC15A5A6NIM6 579 aa21.23■□□□□ 0.99
TUBGCP3-204ENST00000464139 TREHO43280 583 aa21.23■□□□□ 0.99
TUBGCP3-204ENST00000464139 RBL1P28749 1068 aa21.23■□□□□ 0.99
TUBGCP3-204ENST00000464139 MFSD10Q14728 455 aa21.23■□□□□ 0.99
TUBGCP3-204ENST00000464139 FBXO47Q5MNV8 452 aa21.23■□□□□ 0.99
TUBGCP3-204ENST00000464139 FAXCQ5TGI0 409 aa21.23■□□□□ 0.99
TUBGCP3-204ENST00000464139 UNC93AQ86WB7 457 aa21.23■□□□□ 0.99
TUBGCP3-204ENST00000464139 FAF2Q96CS3 445 aa21.23■□□□□ 0.99
TUBGCP3-204ENST00000464139 PHACTR1Q9C0D0 580 aa21.23■□□□□ 0.99
TUBGCP3-204ENST00000464139 UBQLN1Q9UMX0 589 aaKnown RBP21.23■□□□□ 0.99
TUBGCP3-204ENST00000464139 RASSF9O75901 435 aa21.22■□□□□ 0.99
TUBGCP3-204ENST00000464139 KRT4P19013 534 aa21.22■□□□□ 0.99
TUBGCP3-204ENST00000464139 GNL1P36915 607 aaPredicted RBP21.22■□□□□ 0.99
TUBGCP3-204ENST00000464139 CDC42EP1Q00587 391 aa21.22■□□□□ 0.99
TUBGCP3-204ENST00000464139 KCNJ11Q14654 390 aa21.22■□□□□ 0.99
TUBGCP3-204ENST00000464139 SLC1A5Q15758 541 aa21.22■□□□□ 0.99
TUBGCP3-204ENST00000464139 TLK2Q86UE8 772 aa21.22■□□□□ 0.99
TUBGCP3-204ENST00000464139 RAB6BQ9NRW1 208 aa21.22■□□□□ 0.99
TUBGCP3-204ENST00000464139 KPNA7A9QM74 516 aa21.22■□□□□ 0.99
TUBGCP3-204ENST00000464139 PIRO00625 290 aa21.22■□□□□ 0.99
TUBGCP3-204ENST00000464139 UBOX5O94941 541 aa21.22■□□□□ 0.99
TUBGCP3-204ENST00000464139 DNAJC3Q13217 504 aa21.22■□□□□ 0.99
TUBGCP3-204ENST00000464139 SNX17Q15036 470 aa21.22■□□□□ 0.99
TUBGCP3-204ENST00000464139 GPR162Q16538 588 aa21.22■□□□□ 0.99
TUBGCP3-204ENST00000464139 ARHGAP17Q68EM7 881 aa21.22■□□□□ 0.99
TUBGCP3-204ENST00000464139 TEKT4Q8WW24 435 aa21.22■□□□□ 0.99
TUBGCP3-204ENST00000464139 PITPNM3Q9BZ71 974 aa21.22■□□□□ 0.99
TUBGCP3-204ENST00000464139 PPCSQ9HAB8 311 aa21.22■□□□□ 0.99
TUBGCP3-204ENST00000464139 SENP1Q9P0U3 644 aa21.22■□□□□ 0.99
TUBGCP3-204ENST00000464139 SLC12A4Q9UP95 1085 aa21.22■□□□□ 0.99
TUBGCP3-204ENST00000464139 SOX4Q06945 474 aaPredicted RBP21.21■□□□□ 0.99
TUBGCP3-204ENST00000464139 SPARCL1Q14515 664 aa21.21■□□□□ 0.99
TUBGCP3-204ENST00000464139 ADGRD1Q6QNK2 874 aa21.21■□□□□ 0.99
TUBGCP3-204ENST00000464139 CCDC33Q8N5R6 958 aa21.21■□□□□ 0.99
TUBGCP3-204ENST00000464139 THOC1Q96FV9 657 aaKnown RBP21.21■□□□□ 0.99
TUBGCP3-204ENST00000464139 SMG5Q9UPR3 1016 aaKnown RBP21.21■□□□□ 0.99
TUBGCP3-204ENST00000464139 ARL2BPQ9Y2Y0 163 aa21.21■□□□□ 0.99
TUBGCP3-204ENST00000464139 SMAPO00193 183 aa21.21■□□□□ 0.99
TUBGCP3-204ENST00000464139 HGSO14964 777 aaPredicted RBP21.21■□□□□ 0.99
TUBGCP3-204ENST00000464139 TYROBPO43914 113 aa21.21■□□□□ 0.99
TUBGCP3-204ENST00000464139 BEX3Q00994 111 aa21.21■□□□□ 0.99
TUBGCP3-204ENST00000464139 BST2Q10589 180 aaKnown RBP21.21■□□□□ 0.99
TUBGCP3-204ENST00000464139 RASA2Q15283 850 aa21.21■□□□□ 0.99
TUBGCP3-204ENST00000464139 MTFR1Q15390 333 aa21.21■□□□□ 0.99
TUBGCP3-204ENST00000464139 KLHL38Q2WGJ6 581 aa21.21■□□□□ 0.99
TUBGCP3-204ENST00000464139 ANKRD52Q8NB46 1076 aa21.21■□□□□ 0.99
TUBGCP3-204ENST00000464139 STK32AQ8WU08 396 aa21.21■□□□□ 0.99
TUBGCP3-204ENST00000464139 TBCBQ99426 244 aa21.21■□□□□ 0.99
TUBGCP3-204ENST00000464139 KLF6Q99612 283 aaPredicted RBP21.21■□□□□ 0.99
TUBGCP3-204ENST00000464139 PRKAG3Q9UGI9 489 aa21.21■□□□□ 0.99
TUBGCP3-204ENST00000464139 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms