RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 CXCL10P02778 98 aa4.12□□□□□ -1.75
SCFD1-204ENST00000463622 FDPSP14324 419 aaKnown RBP4.12□□□□□ -1.75
SCFD1-204ENST00000463622 SCNN1GP51170 649 aa4.12□□□□□ -1.75
SCFD1-204ENST00000463622 EVCP57679 992 aa4.12□□□□□ -1.75
SCFD1-204ENST00000463622 SNAP25P60880 206 aa4.12□□□□□ -1.75
SCFD1-204ENST00000463622 WDR5P61964 334 aaKnown RBP4.12□□□□□ -1.75
SCFD1-204ENST00000463622 PKP1Q13835 747 aa4.12□□□□□ -1.75
SCFD1-204ENST00000463622 KRT32Q14532 448 aa4.12□□□□□ -1.75
SCFD1-204ENST00000463622 WTAPQ15007 396 aa4.12□□□□□ -1.75
SCFD1-204ENST00000463622 TCEA2Q15560 299 aa4.12□□□□□ -1.75
SCFD1-204ENST00000463622 FNDC7Q5VTL7 733 aa4.12□□□□□ -1.75
SCFD1-204ENST00000463622 NFRKBQ6P4R8 1299 aa4.12□□□□□ -1.75
SCFD1-204ENST00000463622 FAM111BQ6SJ93 734 aa4.12□□□□□ -1.75
SCFD1-204ENST00000463622 CLEC14AQ86T13 490 aa4.12□□□□□ -1.75
SCFD1-204ENST00000463622 LRRTM3Q86VH5 581 aa4.12□□□□□ -1.75
SCFD1-204ENST00000463622 MICU3Q86XE3 530 aa4.12□□□□□ -1.75
SCFD1-204ENST00000463622 ZNF444Q8N0Y2 327 aaPredicted RBP4.12□□□□□ -1.75
SCFD1-204ENST00000463622 CPXCR1Q8N123 301 aa4.12□□□□□ -1.75
SCFD1-204ENST00000463622 GDPD5Q8WTR4 605 aa4.12□□□□□ -1.75
SCFD1-204ENST00000463622 CACTINQ8WUQ7 758 aaKnown RBP4.12□□□□□ -1.75
SCFD1-204ENST00000463622 SNX21Q969T3 373 aa4.12□□□□□ -1.75
SCFD1-204ENST00000463622 PGBD4Q96DM1 585 aa4.12□□□□□ -1.75
SCFD1-204ENST00000463622 PABPC5Q96DU9 382 aaKnown RBP4.12□□□□□ -1.75
SCFD1-204ENST00000463622 CTAGE1Q96RT6 745 aa4.12□□□□□ -1.75
SCFD1-204ENST00000463622 KRT23Q9C075 422 aa4.12□□□□□ -1.75
SCFD1-204ENST00000463622 FTOQ9C0B1 505 aaKnown RBP eCLIP4.12□□□□□ -1.75
SCFD1-204ENST00000463622 RNF41Q9H4P4 317 aaPredicted RBP4.12□□□□□ -1.75
SCFD1-204ENST00000463622 ZMAT4Q9H898 229 aa4.12□□□□□ -1.75
SCFD1-204ENST00000463622 MMRN2Q9H8L6 949 aa4.12□□□□□ -1.75
SCFD1-204ENST00000463622 RAVER2Q9HCJ3 691 aaKnown RBP4.12□□□□□ -1.75
SCFD1-204ENST00000463622 A1CFQ9NQ94 594 aaKnown RBP4.12□□□□□ -1.75
SCFD1-204ENST00000463622 TCP11L1Q9NUJ3 509 aa4.12□□□□□ -1.75
SCFD1-204ENST00000463622 CLIP2Q9UDT6 1046 aa4.12□□□□□ -1.75
SCFD1-204ENST00000463622 STX8Q9UNK0 236 aa4.12□□□□□ -1.75
SCFD1-204ENST00000463622 ZDBF2Q9HCK1 2354 aa4.12□□□□□ -1.75
SCFD1-204ENST00000463622 C5orf42Q9H799 3197 aa4.12□□□□□ -1.75
SCFD1-204ENST00000463622 MYH8P13535 1937 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 A0A0A6YYK5 440 aaPredicted RBP4.11□□□□□ -1.75
SCFD1-204ENST00000463622 H3BQ06 376 aaPredicted RBP4.11□□□□□ -1.75
SCFD1-204ENST00000463622 NCK2O43639 380 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 PFKFB2O60825 505 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 GAS7O60861 476 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 STC2O76061 302 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 PCDH8O95206 1070 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 PARNO95453 639 aaKnown RBP4.11□□□□□ -1.75
SCFD1-204ENST00000463622 PDHBP11177 359 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 PSMA5P28066 241 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 SESN2P58004 480 aaPredicted RBP4.11□□□□□ -1.75
SCFD1-204ENST00000463622 HTRA4P83105 476 aaPredicted RBP4.11□□□□□ -1.75
SCFD1-204ENST00000463622 TRDNQ13061 729 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 BFSP2Q13515 415 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 CUL4AQ13619 759 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 TCTN1Q2MV58 587 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 IFIT1BQ5T764 474 aaKnown RBP4.11□□□□□ -1.75
SCFD1-204ENST00000463622 TMCO2Q7Z6W1 182 aaPredicted RBP4.11□□□□□ -1.75
SCFD1-204ENST00000463622 PHYKPLQ8IUZ5 450 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 AMOTL1Q8IY63 956 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 ELOA2Q8IYF1 753 aaPredicted RBP4.11□□□□□ -1.75
SCFD1-204ENST00000463622 FBXL16Q8N461 479 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 SRBD1Q8N5C6 995 aaKnown RBP4.11□□□□□ -1.75
SCFD1-204ENST00000463622 NSUN7Q8NE18 718 aaKnown RBP4.11□□□□□ -1.75
SCFD1-204ENST00000463622 PIBF1Q8WXW3 757 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 PHKBQ93100 1093 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 UBAC1Q9BSL1 405 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 MTG1Q9BT17 334 aaPredicted RBP4.11□□□□□ -1.75
SCFD1-204ENST00000463622 SOX7Q9BT81 388 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 UBA5Q9GZZ9 404 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 VTA1Q9NP79 307 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 CEP72Q9P209 647 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 MAD2L2Q9UI95 211 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 FEM1BQ9UK73 627 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 NAP1L2Q9ULW6 460 aaPredicted RBP4.11□□□□□ -1.75
SCFD1-204ENST00000463622 SYNPO2Q9UMS6 1093 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 FAM50BQ9Y247 325 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 MRPL42Q9Y6G3 142 aaKnown RBP4.11□□□□□ -1.75
SCFD1-204ENST00000463622 WDR19Q8NEZ3 1342 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 NID2Q14112 1375 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 A0A0G2JMZ2 1700 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 LOC102724159A0A0B4J2E5 919 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 PMS2P1A4D2B8 440 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 TMEM221A6NGB7 291 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 GOLGA8AA7E2F4 631 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 H3BNC9 293 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 M0R296 226 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 DAPK3O43293 454 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 TGM5O43548 720 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 PLA2G6O60733 806 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 NBNO60934 754 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 F2P00734 622 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 SLC3A2P08195 630 aaKnown RBP4.11□□□□□ -1.75
SCFD1-204ENST00000463622 SNHG28P0DPA3 235 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 PCP11498 1178 aaKnown RBP4.11□□□□□ -1.75
SCFD1-204ENST00000463622 DDIT3P35638 169 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 SLC16A2P36021 539 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 LIFRP42702 1097 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 BCAR1P56945 870 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 DEFB103AP81534 67 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 DSG1Q02413 1049 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 TUBA3CQ13748 450 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 GRM4Q14833 912 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms