RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 SLC4A5Q9BY07 1137 aa20.8■□□□□ 0.92
COL9A3-204ENST00000463487 RBSNQ9H1K0 784 aa20.8■□□□□ 0.92
COL9A3-204ENST00000463487 CD320Q9NPF0 282 aa20.8■□□□□ 0.92
COL9A3-204ENST00000463487 A0A1W2PQH9 124 aa20.79■□□□□ 0.92
COL9A3-204ENST00000463487 LRRC53A6NM62 1247 aa20.79■□□□□ 0.92
COL9A3-204ENST00000463487 DCXO43602 365 aa20.79■□□□□ 0.92
COL9A3-204ENST00000463487 MBL2P11226 248 aaPredicted RBP20.79■□□□□ 0.92
COL9A3-204ENST00000463487 PSMC3P17980 439 aa20.79■□□□□ 0.92
COL9A3-204ENST00000463487 ATP5C1P36542 298 aaKnown RBP20.79■□□□□ 0.92
COL9A3-204ENST00000463487 YWHAGP61981 247 aaKnown RBP eCLIP20.79■□□□□ 0.92
COL9A3-204ENST00000463487 GOLGA8FQ08AF8 430 aa20.79■□□□□ 0.92
COL9A3-204ENST00000463487 GOLGA8DPQ0D2H9 430 aa20.79■□□□□ 0.92
COL9A3-204ENST00000463487 BTBD8Q5XKL5 378 aa20.79■□□□□ 0.92
COL9A3-204ENST00000463487 TANGO2Q6ICL3 276 aa20.79■□□□□ 0.92
COL9A3-204ENST00000463487 RSRC2Q7L4I2 434 aaKnown RBP20.79■□□□□ 0.92
COL9A3-204ENST00000463487 SLC44A3Q8N4M1 653 aa20.79■□□□□ 0.92
COL9A3-204ENST00000463487 RSAD2Q8WXG1 361 aa20.79■□□□□ 0.92
COL9A3-204ENST00000463487 PPP1R13BQ96KQ4 1090 aa20.79■□□□□ 0.92
COL9A3-204ENST00000463487 TTYH3Q9C0H2 523 aa20.79■□□□□ 0.92
COL9A3-204ENST00000463487 OLA1Q9NTK5 396 aaKnown RBP20.79■□□□□ 0.92
COL9A3-204ENST00000463487 MUTYHQ9UIF7 546 aa20.79■□□□□ 0.92
COL9A3-204ENST00000463487 ARHGAP26Q9UNA1 814 aa20.79■□□□□ 0.92
COL9A3-204ENST00000463487 LUC7L2Q9Y383 392 aaKnown RBP20.79■□□□□ 0.92
COL9A3-204ENST00000463487 HEPACAM2A8MVW5 462 aa20.78■□□□□ 0.92
COL9A3-204ENST00000463487 OLFM2O95897 454 aa20.78■□□□□ 0.92
COL9A3-204ENST00000463487 MMEP08473 750 aa20.78■□□□□ 0.92
COL9A3-204ENST00000463487 SRFP11831 508 aa20.78■□□□□ 0.92
COL9A3-204ENST00000463487 RARGP13631 454 aa20.78■□□□□ 0.92
COL9A3-204ENST00000463487 FCARP24071 287 aa20.78■□□□□ 0.92
COL9A3-204ENST00000463487 VIPR2P41587 438 aa20.78■□□□□ 0.92
COL9A3-204ENST00000463487 RPL34P49207 117 aaKnown RBP20.78■□□□□ 0.92
COL9A3-204ENST00000463487 DAOAP59103 153 aa20.78■□□□□ 0.92
COL9A3-204ENST00000463487 SLC7A9P82251 487 aa20.78■□□□□ 0.92
COL9A3-204ENST00000463487 ZBED6P86452 979 aa20.78■□□□□ 0.92
COL9A3-204ENST00000463487 PFKPQ01813 784 aa20.78■□□□□ 0.92
COL9A3-204ENST00000463487 C10orf120Q5SQS8 335 aa20.78■□□□□ 0.92
COL9A3-204ENST00000463487 CC2D1AQ6P1N0 951 aaPredicted RBP20.78■□□□□ 0.92
COL9A3-204ENST00000463487 KLHDC10Q6PID8 442 aa20.78■□□□□ 0.92
COL9A3-204ENST00000463487 TMEM110Q86TL2 294 aa20.78■□□□□ 0.92
COL9A3-204ENST00000463487 MFSD6LQ8IWD5 586 aa20.78■□□□□ 0.92
COL9A3-204ENST00000463487 ZNF276Q8N554 614 aa20.78■□□□□ 0.92
COL9A3-204ENST00000463487 C1orf131Q8NDD1 294 aaKnown RBP20.78■□□□□ 0.92
COL9A3-204ENST00000463487 BPIFB1Q8TDL5 484 aa20.78■□□□□ 0.92
COL9A3-204ENST00000463487 RNF139Q8WU17 664 aa20.78■□□□□ 0.92
COL9A3-204ENST00000463487 DDX1Q92499 740 aaKnown RBP20.78■□□□□ 0.92
COL9A3-204ENST00000463487 TRMT61BQ9BVS5 477 aaKnown RBP20.78■□□□□ 0.92
COL9A3-204ENST00000463487 ABCC13Q9NSE7 274 aa20.78■□□□□ 0.92
COL9A3-204ENST00000463487 SEPT11Q9NVA2 429 aaKnown RBP20.78■□□□□ 0.92
COL9A3-204ENST00000463487 NOCTQ9UK39 431 aaKnown RBP20.78■□□□□ 0.92
COL9A3-204ENST00000463487 CAPN11Q9UMQ6 739 aa20.78■□□□□ 0.92
COL9A3-204ENST00000463487 DUSP12Q9UNI6 340 aa20.78■□□□□ 0.92
COL9A3-204ENST00000463487 ANAPC1Q9H1A4 1944 aa20.78■□□□□ 0.92
COL9A3-204ENST00000463487 COCHO43405 550 aa20.77■□□□□ 0.92
COL9A3-204ENST00000463487 PRAMEF12O95522 483 aa20.77■□□□□ 0.92
COL9A3-204ENST00000463487 CFHP08603 1231 aa20.77■□□□□ 0.92
COL9A3-204ENST00000463487 CDH5P33151 784 aaPredicted RBP20.77■□□□□ 0.92
COL9A3-204ENST00000463487 PPP1R2P3Q6NXS1 205 aa20.77■□□□□ 0.92
COL9A3-204ENST00000463487 TOGARAM2Q6ZUX3 1019 aa20.77■□□□□ 0.92
COL9A3-204ENST00000463487 ZDHHC17Q8IUH5 632 aa20.77■□□□□ 0.92
COL9A3-204ENST00000463487 USP13Q92995 863 aaPredicted RBP20.77■□□□□ 0.92
COL9A3-204ENST00000463487 CYP2S1Q96SQ9 504 aa20.77■□□□□ 0.92
COL9A3-204ENST00000463487 CCSER2Q9H7U1 834 aa20.77■□□□□ 0.92
COL9A3-204ENST00000463487 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.77■□□□□ 0.92
COL9A3-204ENST00000463487 AIPL1Q9NZN9 384 aa20.77■□□□□ 0.92
COL9A3-204ENST00000463487 DNMT3LQ9UJW3 386 aa20.77■□□□□ 0.92
COL9A3-204ENST00000463487 STRIP2Q9ULQ0 834 aa20.77■□□□□ 0.92
COL9A3-204ENST00000463487 E5RJQ4 531 aa20.76■□□□□ 0.91
COL9A3-204ENST00000463487 PIK3R2O00459 728 aa20.76■□□□□ 0.91
COL9A3-204ENST00000463487 ZNF263O14978 683 aa20.76■□□□□ 0.91
COL9A3-204ENST00000463487 TSR1Q2NL82 804 aaKnown RBP20.76■□□□□ 0.91
COL9A3-204ENST00000463487 ARHGAP29Q52LW3 1261 aa20.76■□□□□ 0.91
COL9A3-204ENST00000463487 VITQ6UXI7 678 aa20.76■□□□□ 0.91
COL9A3-204ENST00000463487 SCD5Q86SK9 330 aa20.76■□□□□ 0.91
COL9A3-204ENST00000463487 ERICH1Q86X53 443 aa20.76■□□□□ 0.91
COL9A3-204ENST00000463487 GAS2L3Q86XJ1 694 aa20.76■□□□□ 0.91
COL9A3-204ENST00000463487 VSTM4Q8IW00 320 aa20.76■□□□□ 0.91
COL9A3-204ENST00000463487 KIAA1958Q8N8K9 716 aa20.76■□□□□ 0.91
COL9A3-204ENST00000463487 TTC16Q8NEE8 873 aa20.76■□□□□ 0.91
COL9A3-204ENST00000463487 SLC20A1Q8WUM9 679 aa20.76■□□□□ 0.91
COL9A3-204ENST00000463487 CPLX3Q8WVH0 158 aa20.76■□□□□ 0.91
COL9A3-204ENST00000463487 SYN2Q92777 582 aaPredicted RBP20.76■□□□□ 0.91
COL9A3-204ENST00000463487 IRF7Q92985 503 aa20.76■□□□□ 0.91
COL9A3-204ENST00000463487 SMG9Q9H0W8 520 aaKnown RBP20.76■□□□□ 0.91
COL9A3-204ENST00000463487 BRD9Q9H8M2 597 aa20.76■□□□□ 0.91
COL9A3-204ENST00000463487 CPQQ9Y646 472 aa20.76■□□□□ 0.91
COL9A3-204ENST00000463487 BZW2Q9Y6E2 419 aaKnown RBP20.76■□□□□ 0.91
COL9A3-204ENST00000463487 YJEFN3A6XGL0 299 aa20.75■□□□□ 0.91
COL9A3-204ENST00000463487 E7ENQ6 273 aa20.75■□□□□ 0.91
COL9A3-204ENST00000463487 LTFP02788 710 aa20.75■□□□□ 0.91
COL9A3-204ENST00000463487 TCF3P15923 654 aa20.75■□□□□ 0.91
COL9A3-204ENST00000463487 FMO1Q01740 532 aa20.75■□□□□ 0.91
COL9A3-204ENST00000463487 KLHL30Q0D2K2 578 aa20.75■□□□□ 0.91
COL9A3-204ENST00000463487 FCHO2Q0JRZ9 810 aa20.75■□□□□ 0.91
COL9A3-204ENST00000463487 EFHC1Q5JVL4 640 aa20.75■□□□□ 0.91
COL9A3-204ENST00000463487 BSPRYQ5W0U4 402 aa20.75■□□□□ 0.91
COL9A3-204ENST00000463487 POTEHQ6S545 545 aa20.75■□□□□ 0.91
COL9A3-204ENST00000463487 VPS36Q86VN1 386 aa20.75■□□□□ 0.91
COL9A3-204ENST00000463487 SCUBE3Q8IX30 993 aa20.75■□□□□ 0.91
COL9A3-204ENST00000463487 WDTC1Q8N5D0 677 aa20.75■□□□□ 0.91
COL9A3-204ENST00000463487 ST13P5Q8NFI4 369 aaPredicted RBP20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms