RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 CCDC127Q96BQ5 260 aa22.02■■□□□ 1.12
CPSF7-209ENST00000463244 KCNK16Q96T55 309 aa22.02■■□□□ 1.12
CPSF7-209ENST00000463244 LRRC27Q9C0I9 530 aa22.02■■□□□ 1.12
CPSF7-209ENST00000463244 GZF1Q9H116 711 aaPredicted RBP22.02■■□□□ 1.12
CPSF7-209ENST00000463244 XYLT2Q9H1B5 865 aa22.02■■□□□ 1.12
CPSF7-209ENST00000463244 NEUROG3Q9Y4Z2 214 aa22.02■■□□□ 1.12
CPSF7-209ENST00000463244 AP5Z1O43299 807 aa22.01■■□□□ 1.11
CPSF7-209ENST00000463244 TUBP50607 506 aa22.01■■□□□ 1.11
CPSF7-209ENST00000463244 SEMA3BQ13214 749 aa22.01■■□□□ 1.11
CPSF7-209ENST00000463244 E2F4Q16254 413 aa22.01■■□□□ 1.11
CPSF7-209ENST00000463244 PREPLQ4J6C6 727 aaPredicted RBP22.01■■□□□ 1.11
CPSF7-209ENST00000463244 BTBD8Q5XKL5 378 aa22.01■■□□□ 1.11
CPSF7-209ENST00000463244 BBS7Q8IWZ6 715 aa22.01■■□□□ 1.11
CPSF7-209ENST00000463244 TERB1Q8NA31 727 aa22.01■■□□□ 1.11
CPSF7-209ENST00000463244 SCAMP5Q8TAC9 235 aa22.01■■□□□ 1.11
CPSF7-209ENST00000463244 CEP76Q8TAP6 659 aa22.01■■□□□ 1.11
CPSF7-209ENST00000463244 ZNF516Q92618 1163 aa22.01■■□□□ 1.11
CPSF7-209ENST00000463244 CCSER2Q9H7U1 834 aa22.01■■□□□ 1.11
CPSF7-209ENST00000463244 SPHK2Q9NRA0 654 aa22.01■■□□□ 1.11
CPSF7-209ENST00000463244 IL37Q9NZH6 218 aa22.01■■□□□ 1.11
CPSF7-209ENST00000463244 DEC1Q9P2X7 70 aa22.01■■□□□ 1.11
CPSF7-209ENST00000463244 NXF1Q9UBU9 619 aaKnown RBP22.01■■□□□ 1.11
CPSF7-209ENST00000463244 CHORDC1Q9UHD1 332 aaPredicted RBP22.01■■□□□ 1.11
CPSF7-209ENST00000463244 HCN2Q9UL51 889 aa22.01■■□□□ 1.11
CPSF7-209ENST00000463244 SLC6A14Q9UN76 642 aa22.01■■□□□ 1.11
CPSF7-209ENST00000463244 SH3BP1Q9Y3L3 701 aa22.01■■□□□ 1.11
CPSF7-209ENST00000463244 MYH10P35580 1976 aa22.01■■□□□ 1.11
CPSF7-209ENST00000463244 CELSR3Q9NYQ7 3312 aa22■■□□□ 1.11
CPSF7-209ENST00000463244 CLIC2O15247 247 aa22■■□□□ 1.11
CPSF7-209ENST00000463244 HYAL3O43820 417 aaPredicted RBP22■■□□□ 1.11
CPSF7-209ENST00000463244 CFIP05156 583 aa22■■□□□ 1.11
CPSF7-209ENST00000463244 ZDHHC11BP0C7U3 371 aa22■■□□□ 1.11
CPSF7-209ENST00000463244 GABRG2P18507 467 aa22■■□□□ 1.11
CPSF7-209ENST00000463244 ATICP31939 592 aa22■■□□□ 1.11
CPSF7-209ENST00000463244 CYP2J2P51589 502 aa22■■□□□ 1.11
CPSF7-209ENST00000463244 SLC5A3P53794 718 aa22■■□□□ 1.11
CPSF7-209ENST00000463244 MYL6P60660 151 aa22■■□□□ 1.11
CPSF7-209ENST00000463244 RPL6Q02878 288 aaKnown RBP22■■□□□ 1.11
CPSF7-209ENST00000463244 TRPC3Q13507 836 aa22■■□□□ 1.11
CPSF7-209ENST00000463244 DUOXA1Q1HG43 343 aa22■■□□□ 1.11
CPSF7-209ENST00000463244 FAM26FQ5R3K3 315 aa22■■□□□ 1.11
CPSF7-209ENST00000463244 XXYLT1Q8NBI6 393 aa22■■□□□ 1.11
CPSF7-209ENST00000463244 CAPN10Q9HC96 672 aa22■■□□□ 1.11
CPSF7-209ENST00000463244 CALCOCO1Q9P1Z2 691 aa22■■□□□ 1.11
CPSF7-209ENST00000463244 SPAARA0A1B0GVQ0 90 aa21.99■■□□□ 1.11
CPSF7-209ENST00000463244 FAM92AA1XBS5 289 aa21.99■■□□□ 1.11
CPSF7-209ENST00000463244 SRRM3A6NNA2 597 aaPredicted RBP21.99■■□□□ 1.11
CPSF7-209ENST00000463244 NASPP49321 788 aaPredicted RBP21.99■■□□□ 1.11
CPSF7-209ENST00000463244 ATXN3P54252 364 aaPredicted RBP21.99■■□□□ 1.11
CPSF7-209ENST00000463244 SNRPFP62306 86 aaKnown RBP21.99■■□□□ 1.11
CPSF7-209ENST00000463244 ASIC1P78348 528 aa21.99■■□□□ 1.11
CPSF7-209ENST00000463244 SIM1P81133 766 aaPredicted RBP21.99■■□□□ 1.11
CPSF7-209ENST00000463244 ANO4Q32M45 955 aa21.99■■□□□ 1.11
CPSF7-209ENST00000463244 C10orf76Q5T2E6 689 aa21.99■■□□□ 1.11
CPSF7-209ENST00000463244 CNNM4Q6P4Q7 775 aa21.99■■□□□ 1.11
CPSF7-209ENST00000463244 SLC36A4Q6YBV0 504 aa21.99■■□□□ 1.11
CPSF7-209ENST00000463244 NUDT18Q6ZVK8 323 aa21.99■■□□□ 1.11
CPSF7-209ENST00000463244 PAQR9Q6ZVX9 377 aa21.99■■□□□ 1.11
CPSF7-209ENST00000463244 FAM35AQ86V20 835 aa21.99■■□□□ 1.11
CPSF7-209ENST00000463244 TMEM25Q86YD3 366 aa21.99■■□□□ 1.11
CPSF7-209ENST00000463244 MIB1Q86YT6 1006 aa21.99■■□□□ 1.11
CPSF7-209ENST00000463244 ZCCHC14Q8WYQ9 949 aaKnown RBP21.99■■□□□ 1.11
CPSF7-209ENST00000463244 WBP2Q969T9 261 aa21.99■■□□□ 1.11
CPSF7-209ENST00000463244 SYAP1Q96A49 352 aaPredicted RBP21.99■■□□□ 1.11
CPSF7-209ENST00000463244 CUEDC2Q9H467 287 aa21.99■■□□□ 1.11
CPSF7-209ENST00000463244 VRTNQ9H8Y1 702 aa21.99■■□□□ 1.11
CPSF7-209ENST00000463244 DMAP1Q9NPF5 467 aaPredicted RBP21.99■■□□□ 1.11
CPSF7-209ENST00000463244 FSCN3Q9NQT6 498 aa21.99■■□□□ 1.11
CPSF7-209ENST00000463244 MSRB2Q9Y3D2 182 aa21.99■■□□□ 1.11
CPSF7-209ENST00000463244 STARD13Q9Y3M8 1113 aa21.99■■□□□ 1.11
CPSF7-209ENST00000463244 ATP8B3O60423 1300 aa21.99■■□□□ 1.11
CPSF7-209ENST00000463244 UBE4BO95155 1302 aa21.99■■□□□ 1.11
CPSF7-209ENST00000463244 TRIM24O15164 1050 aa21.98■■□□□ 1.11
CPSF7-209ENST00000463244 SERPINF2P08697 491 aa21.98■■□□□ 1.11
CPSF7-209ENST00000463244 HOXB2P14652 356 aa21.98■■□□□ 1.11
CPSF7-209ENST00000463244 NTSR1P30989 418 aa21.98■■□□□ 1.11
CPSF7-209ENST00000463244 AMPD3Q01432 767 aa21.98■■□□□ 1.11
CPSF7-209ENST00000463244 GFPT1Q06210 699 aaPredicted RBP21.98■■□□□ 1.11
CPSF7-209ENST00000463244 HDDC3Q8N4P3 179 aa21.98■■□□□ 1.11
CPSF7-209ENST00000463244 DEFB119Q8N690 84 aa21.98■■□□□ 1.11
CPSF7-209ENST00000463244 SCFD1Q8WVM8 642 aa21.98■■□□□ 1.11
CPSF7-209ENST00000463244 SMARCD1Q96GM5 515 aa21.98■■□□□ 1.11
CPSF7-209ENST00000463244 GTPBP2Q9BX10 602 aaKnown RBP21.98■■□□□ 1.11
CPSF7-209ENST00000463244 SMYD3Q9H7B4 428 aa21.98■■□□□ 1.11
CPSF7-209ENST00000463244 COMMD8Q9NX08 183 aa21.98■■□□□ 1.11
CPSF7-209ENST00000463244 GMIPQ9P107 970 aa21.98■■□□□ 1.11
CPSF7-209ENST00000463244 KLK13Q9UKR3 277 aa21.98■■□□□ 1.11
CPSF7-209ENST00000463244 LOC400499M0QZD8 3231 aa21.98■■□□□ 1.11
CPSF7-209ENST00000463244 SMG1Q96Q15 3661 aaKnown RBP21.98■■□□□ 1.11
CPSF7-209ENST00000463244 A0A1W2PQF6 199 aa21.97■■□□□ 1.11
CPSF7-209ENST00000463244 CDH8P55286 799 aa21.97■■□□□ 1.11
CPSF7-209ENST00000463244 ZNF33AQ06730 810 aa21.97■■□□□ 1.11
CPSF7-209ENST00000463244 EHHADHQ08426 723 aa21.97■■□□□ 1.11
CPSF7-209ENST00000463244 RABEPKQ7Z6M1 372 aa21.97■■□□□ 1.11
CPSF7-209ENST00000463244 NELFCDQ8IXH7 590 aa21.97■■□□□ 1.11
CPSF7-209ENST00000463244 MED10Q9BTT4 135 aa21.97■■□□□ 1.11
CPSF7-209ENST00000463244 CD248Q9HCU0 757 aa21.97■■□□□ 1.11
CPSF7-209ENST00000463244 MTMR6Q9Y217 621 aa21.97■■□□□ 1.11
CPSF7-209ENST00000463244 IGHV1OR15-9A0A0B4J2B8 117 aa21.96■■□□□ 1.11
CPSF7-209ENST00000463244 OPHN1O60890 802 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms