RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 MED10Q9BTT4 135 aa20.98■□□□□ 0.95
VARS-221ENST00000463184 MBD1Q9UIS9 605 aaPredicted RBP20.98■□□□□ 0.95
VARS-221ENST00000463184 WASF3Q9UPY6 502 aa20.98■□□□□ 0.95
VARS-221ENST00000463184 TCRBV21S2A2A0A5A6 115 aa20.97■□□□□ 0.95
VARS-221ENST00000463184 HOXC11O43248 304 aaPredicted RBP20.97■□□□□ 0.95
VARS-221ENST00000463184 EXOC3O60645 756 aa20.97■□□□□ 0.95
VARS-221ENST00000463184 SLC5A3P53794 718 aa20.97■□□□□ 0.95
VARS-221ENST00000463184 CDH8P55286 799 aa20.97■□□□□ 0.95
VARS-221ENST00000463184 UAP1L1Q3KQV9 507 aa20.97■□□□□ 0.95
VARS-221ENST00000463184 ATL3Q6DD88 541 aa20.97■□□□□ 0.95
VARS-221ENST00000463184 SHC4Q6S5L8 630 aa20.97■□□□□ 0.95
VARS-221ENST00000463184 UNQ6494/PRO21346Q6UXR6 183 aa20.97■□□□□ 0.95
VARS-221ENST00000463184 FAM35AQ86V20 835 aa20.97■□□□□ 0.95
VARS-221ENST00000463184 ETFBKMTQ8IXQ9 262 aa20.97■□□□□ 0.95
VARS-221ENST00000463184 PGBD3Q8N328 593 aa20.97■□□□□ 0.95
VARS-221ENST00000463184 FRMD1Q8N878 549 aa20.97■□□□□ 0.95
VARS-221ENST00000463184 SMARCD1Q96GM5 515 aa20.97■□□□□ 0.95
VARS-221ENST00000463184 DMAP1Q9NPF5 467 aaPredicted RBP20.97■□□□□ 0.95
VARS-221ENST00000463184 SPHK2Q9NRA0 654 aa20.97■□□□□ 0.95
VARS-221ENST00000463184 DEC1Q9P2X7 70 aa20.97■□□□□ 0.95
VARS-221ENST00000463184 TFIP11Q9UBB9 837 aaKnown RBP20.97■□□□□ 0.95
VARS-221ENST00000463184 PVALEFA0A1B0GWK0 134 aa20.96■□□□□ 0.95
VARS-221ENST00000463184 FAM92AA1XBS5 289 aa20.96■□□□□ 0.95
VARS-221ENST00000463184 C1QTNF9BB2RNN3 333 aa20.96■□□□□ 0.95
VARS-221ENST00000463184 YEATS4O95619 227 aa20.96■□□□□ 0.95
VARS-221ENST00000463184 ZDHHC11BP0C7U3 371 aa20.96■□□□□ 0.95
VARS-221ENST00000463184 C1QTNF9P0C862 333 aa20.96■□□□□ 0.95
VARS-221ENST00000463184 PTGER3P43115 390 aa20.96■□□□□ 0.95
VARS-221ENST00000463184 BIRC3Q13489 604 aa20.96■□□□□ 0.95
VARS-221ENST00000463184 KNOP1Q1ED39 458 aaKnown RBP20.96■□□□□ 0.95
VARS-221ENST00000463184 ZNF699Q32M78 642 aa20.96■□□□□ 0.95
VARS-221ENST00000463184 ZNF667Q5HYK9 610 aa20.96■□□□□ 0.95
VARS-221ENST00000463184 LYSMD4Q5XG99 296 aa20.96■□□□□ 0.95
VARS-221ENST00000463184 SLC23A3Q6PIS1 610 aa20.96■□□□□ 0.95
VARS-221ENST00000463184 PAQR9Q6ZVX9 377 aa20.96■□□□□ 0.95
VARS-221ENST00000463184 ZNF513Q8N8E2 541 aaPredicted RBP20.96■□□□□ 0.95
VARS-221ENST00000463184 NAT16Q8N8M0 369 aa20.96■□□□□ 0.95
VARS-221ENST00000463184 SMYD3Q9H7B4 428 aa20.96■□□□□ 0.95
VARS-221ENST00000463184 CCSER2Q9H7U1 834 aa20.96■□□□□ 0.95
VARS-221ENST00000463184 SLC39A2Q9NP94 309 aa20.96■□□□□ 0.95
VARS-221ENST00000463184 ZDHHC4Q9NPG8 344 aa20.96■□□□□ 0.95
VARS-221ENST00000463184 TMEM74BQ9NUR3 256 aa20.96■□□□□ 0.95
VARS-221ENST00000463184 ATP6V1DQ9Y5K8 247 aa20.96■□□□□ 0.95
VARS-221ENST00000463184 FRYQ5TBA9 3013 aa20.96■□□□□ 0.95
VARS-221ENST00000463184 POLR2DO15514 142 aaKnown RBP20.95■□□□□ 0.94
VARS-221ENST00000463184 TULP3O75386 442 aa20.95■□□□□ 0.94
VARS-221ENST00000463184 HOXD12P35452 270 aa20.95■□□□□ 0.94
VARS-221ENST00000463184 ANO4Q32M45 955 aa20.95■□□□□ 0.94
VARS-221ENST00000463184 ARMCX6Q7L4S7 300 aa20.95■□□□□ 0.94
VARS-221ENST00000463184 BBS7Q8IWZ6 715 aa20.95■□□□□ 0.94
VARS-221ENST00000463184 KDF1Q8NAX2 398 aaPredicted RBP20.95■□□□□ 0.94
VARS-221ENST00000463184 GOLGA5Q8TBA6 731 aa20.95■□□□□ 0.94
VARS-221ENST00000463184 NACA2Q9H009 215 aa20.95■□□□□ 0.94
VARS-221ENST00000463184 SLC32A1Q9H598 525 aa20.95■□□□□ 0.94
VARS-221ENST00000463184 GMIPQ9P107 970 aa20.95■□□□□ 0.94
VARS-221ENST00000463184 PILRBQ9UKJ0 227 aa20.95■□□□□ 0.94
VARS-221ENST00000463184 MYO18AQ92614 2054 aaKnown RBP20.95■□□□□ 0.94
VARS-221ENST00000463184 AP5Z1O43299 807 aa20.94■□□□□ 0.94
VARS-221ENST00000463184 AP1G2O75843 785 aa20.94■□□□□ 0.94
VARS-221ENST00000463184 CLSTN1O94985 981 aa20.94■□□□□ 0.94
VARS-221ENST00000463184 ENGP17813 658 aa20.94■□□□□ 0.94
VARS-221ENST00000463184 CASP4P49662 377 aa20.94■□□□□ 0.94
VARS-221ENST00000463184 CLDN10P78369 228 aa20.94■□□□□ 0.94
VARS-221ENST00000463184 NCOA4Q13772 614 aa20.94■□□□□ 0.94
VARS-221ENST00000463184 FOXD4L6Q3SYB3 417 aaPredicted RBP20.94■□□□□ 0.94
VARS-221ENST00000463184 PEAR1Q5VY43 1037 aaPredicted RBP20.94■□□□□ 0.94
VARS-221ENST00000463184 FOXD4L3Q6VB84 417 aaPredicted RBP20.94■□□□□ 0.94
VARS-221ENST00000463184 SLC36A4Q6YBV0 504 aa20.94■□□□□ 0.94
VARS-221ENST00000463184 TMEM25Q86YD3 366 aa20.94■□□□□ 0.94
VARS-221ENST00000463184 TERB1Q8NA31 727 aa20.94■□□□□ 0.94
VARS-221ENST00000463184 DEFB124Q8NES8 71 aa20.94■□□□□ 0.94
VARS-221ENST00000463184 CEP76Q8TAP6 659 aa20.94■□□□□ 0.94
VARS-221ENST00000463184 PARD3BQ8TEW8 1205 aa20.94■□□□□ 0.94
VARS-221ENST00000463184 ADAM33Q9BZ11 813 aa20.94■□□□□ 0.94
VARS-221ENST00000463184 BLZF1Q9H2G9 400 aa20.94■□□□□ 0.94
VARS-221ENST00000463184 FBXO44Q9H4M3 255 aa20.94■□□□□ 0.94
VARS-221ENST00000463184 CFAP45Q9UL16 551 aa20.94■□□□□ 0.94
VARS-221ENST00000463184 STARD13Q9Y3M8 1113 aa20.94■□□□□ 0.94
VARS-221ENST00000463184 C4BPAP04003 597 aaKnown RBP20.93■□□□□ 0.94
VARS-221ENST00000463184 P4HA1P13674 534 aa20.93■□□□□ 0.94
VARS-221ENST00000463184 CASP1P29466 404 aa20.93■□□□□ 0.94
VARS-221ENST00000463184 DUOXA1Q1HG43 343 aa20.93■□□□□ 0.94
VARS-221ENST00000463184 C10orf76Q5T2E6 689 aa20.93■□□□□ 0.94
VARS-221ENST00000463184 FUKQ8N0W3 1084 aa20.93■□□□□ 0.94
VARS-221ENST00000463184 PLEKHO2Q8TD55 490 aa20.93■□□□□ 0.94
VARS-221ENST00000463184 KRT82Q9NSB4 513 aa20.93■□□□□ 0.94
VARS-221ENST00000463184 ZMIZ1Q9ULJ6 1067 aa20.93■□□□□ 0.94
VARS-221ENST00000463184 GON4LQ3T8J9 2241 aa20.93■□□□□ 0.94
VARS-221ENST00000463184 CEP295Q9C0D2 2601 aa20.92■□□□□ 0.94
VARS-221ENST00000463184 PLXND1Q9Y4D7 1925 aa20.92■□□□□ 0.94
VARS-221ENST00000463184 ASCC3Q8N3C0 2202 aaKnown RBP20.92■□□□□ 0.94
VARS-221ENST00000463184 TMEM8BA6NDV4 472 aa20.92■□□□□ 0.94
VARS-221ENST00000463184 LRRIQ3A6PVS8 624 aaPredicted RBP20.92■□□□□ 0.94
VARS-221ENST00000463184 ZBTB24O43167 697 aaPredicted RBP20.92■□□□□ 0.94
VARS-221ENST00000463184 HOXB2P14652 356 aa20.92■□□□□ 0.94
VARS-221ENST00000463184 GABRG2P18507 467 aa20.92■□□□□ 0.94
VARS-221ENST00000463184 SPINK2P20155 84 aa20.92■□□□□ 0.94
VARS-221ENST00000463184 ITPKAP23677 461 aa20.92■□□□□ 0.94
VARS-221ENST00000463184 NTSR1P30989 418 aa20.92■□□□□ 0.94
VARS-221ENST00000463184 MAPK8P45983 427 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms