RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 GCOM2Q9BZD3 368 aaPredicted RBP3.66□□□□□ -1.82
COL8A1-204ENST00000462604 MTMR12Q9C0I1 747 aa3.66□□□□□ -1.82
COL8A1-204ENST00000462604 NMUR2Q9GZQ4 415 aa3.66□□□□□ -1.82
COL8A1-204ENST00000462604 C2orf40Q9H1Z8 148 aa3.66□□□□□ -1.82
COL8A1-204ENST00000462604 LHX5Q9H2C1 402 aa3.66□□□□□ -1.82
COL8A1-204ENST00000462604 STN1Q9H668 368 aaKnown RBP3.66□□□□□ -1.82
COL8A1-204ENST00000462604 C10orf88Q9H8K7 445 aa3.66□□□□□ -1.82
COL8A1-204ENST00000462604 KCNK13Q9HB14 408 aa3.66□□□□□ -1.82
COL8A1-204ENST00000462604 VCX3AQ9NNX9 186 aa3.66□□□□□ -1.82
COL8A1-204ENST00000462604 METTL5Q9NRN9 209 aaKnown RBP3.66□□□□□ -1.82
COL8A1-204ENST00000462604 RAB6BQ9NRW1 208 aa3.66□□□□□ -1.82
COL8A1-204ENST00000462604 NRBP2Q9NSY0 501 aa3.66□□□□□ -1.82
COL8A1-204ENST00000462604 DDX43Q9NXZ2 648 aaKnown RBP3.66□□□□□ -1.82
COL8A1-204ENST00000462604 ETAA1Q9NY74 926 aa3.66□□□□□ -1.82
COL8A1-204ENST00000462604 TAS2R1Q9NYW7 299 aa3.66□□□□□ -1.82
COL8A1-204ENST00000462604 ARMCX1Q9P291 453 aa3.66□□□□□ -1.82
COL8A1-204ENST00000462604 ZC3H7BQ9UGR2 993 aaKnown RBP3.66□□□□□ -1.82
COL8A1-204ENST00000462604 FBXO40Q9UH90 709 aa3.66□□□□□ -1.82
COL8A1-204ENST00000462604 PCSK1NQ9UHG2 260 aa3.66□□□□□ -1.82
COL8A1-204ENST00000462604 SORCS3Q9UPU3 1222 aa3.66□□□□□ -1.82
COL8A1-204ENST00000462604 C2CD2Q9Y426 696 aa3.66□□□□□ -1.82
COL8A1-204ENST00000462604 HBS1LQ9Y450 684 aaKnown RBP3.66□□□□□ -1.82
COL8A1-204ENST00000462604 TTLL3Q9Y4R7 772 aa3.66□□□□□ -1.82
COL8A1-204ENST00000462604 PPME1Q9Y570 386 aa3.66□□□□□ -1.82
COL8A1-204ENST00000462604 SLC4A7Q9Y6M7 1214 aa3.66□□□□□ -1.82
COL8A1-204ENST00000462604 WASF2Q9Y6W5 498 aa3.66□□□□□ -1.82
COL8A1-204ENST00000462604 BAZ2BQ9UIF8 2168 aaKnown RBP3.66□□□□□ -1.82
COL8A1-204ENST00000462604 ADGRA2Q96PE1 1338 aa3.66□□□□□ -1.82
COL8A1-204ENST00000462604 ZNF541Q9H0D2 1346 aa3.66□□□□□ -1.82
COL8A1-204ENST00000462604 TCRBV7S3A2A0A539 114 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 BCLAF3A2AJT9 711 aaKnown RBP3.65□□□□□ -1.83
COL8A1-204ENST00000462604 KLHL33A6NCF5 533 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 C2orf71A6NGG8 1288 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 ARHGAP42A6NI28 874 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 CAPN14A8MX76 684 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 M0QYV0 167 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 VWA5AO00534 786 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 KCNN4O15554 427 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 GAS2O43903 313 aaKnown RBP3.65□□□□□ -1.83
COL8A1-204ENST00000462604 PRPSAP2O60256 369 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 OPHN1O60890 802 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 TBX10O75333 385 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 CSDE1O75534 798 aaKnown RBP3.65□□□□□ -1.83
COL8A1-204ENST00000462604 TOM1L1O75674 476 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 RAD17O75943 681 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 TOMM70O94826 608 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 KLHL2O95198 593 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 BAG2O95816 211 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 TRUB2O95900 331 aaKnown RBP3.65□□□□□ -1.83
COL8A1-204ENST00000462604 APOEP02649 317 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 ERBB2P04626 1255 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 SERPINE1P05121 402 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 PRKCBP05771 671 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 BPGMP07738 259 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 LYNP07948 512 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 SERPINA6P08185 405 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 UBTFL6P0CB48 400 aaPredicted RBP3.65□□□□□ -1.83
COL8A1-204ENST00000462604 ZFXP17010 805 aaPredicted RBP3.65□□□□□ -1.83
COL8A1-204ENST00000462604 AOC1P19801 751 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 GPD1P21695 349 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 AMPD1P23109 780 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 PRKCHP24723 683 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 IL1R2P27930 398 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 MIPP30301 263 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 RFC1P35251 1148 aaPredicted RBP3.65□□□□□ -1.83
COL8A1-204ENST00000462604 ASPAP45381 313 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 GABRB2P47870 512 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 CPA2P48052 419 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 ZNF143P52747 638 aaPredicted RBP3.65□□□□□ -1.83
COL8A1-204ENST00000462604 COPAP53621 1224 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 ALDH18A1P54886 795 aaKnown RBP3.65□□□□□ -1.83
COL8A1-204ENST00000462604 AQP5P55064 265 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 CDH6P55285 790 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 POLE2P56282 527 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 BCAR1P56945 870 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 SNX16P57768 344 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 ACTR3P61158 418 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 TFAMQ00059 246 aaKnown RBP3.65□□□□□ -1.83
COL8A1-204ENST00000462604 MAP3K10Q02779 954 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 KDSRQ06136 332 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 BST1Q10588 318 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 WASHC5Q12768 1159 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 CBLBQ13191 982 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 MTM1Q13496 603 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 MTMR2Q13614 643 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 CUL3Q13618 768 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 TNFAIP1Q13829 316 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 CAPSQ13938 189 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 MAP7Q14244 749 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 HIC1Q14526 733 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 PDK2Q15119 407 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 STXBP2Q15833 593 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 ZNF394Q53GI3 561 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 TEX44Q53QW1 395 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 FSCBQ5H9T9 825 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 ZNF667Q5HYK9 610 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 MDH1BQ5I0G3 518 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 KCNT1Q5JUK3 1230 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 FAM102AQ5T9C2 384 aaPredicted RBP3.65□□□□□ -1.83
COL8A1-204ENST00000462604 THEMIS2Q5TEJ8 643 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms