RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 TTC8Q8TAM2 541 aa10.06□□□□□ -0.8
PKP4-208ENST00000462335 IPO4Q8TEX9 1081 aaKnown RBP10.06□□□□□ -0.8
PKP4-208ENST00000462335 TFAP2BQ92481 460 aa10.06□□□□□ -0.8
PKP4-208ENST00000462335 SHC3Q92529 594 aa10.06□□□□□ -0.8
PKP4-208ENST00000462335 DNASE1L2Q92874 299 aa10.06□□□□□ -0.8
PKP4-208ENST00000462335 KHSRPQ92945 711 aaKnown RBP eCLIP10.06□□□□□ -0.86e-7■■■□□ 15.3
PKP4-208ENST00000462335 USP13Q92995 863 aaPredicted RBP10.06□□□□□ -0.8
PKP4-208ENST00000462335 ATP2A3Q93084 1043 aa10.06□□□□□ -0.8
PKP4-208ENST00000462335 FAM149B1Q96BN6 582 aa10.06□□□□□ -0.8
PKP4-208ENST00000462335 HSFY1Q96LI6 401 aa10.06□□□□□ -0.8
PKP4-208ENST00000462335 NELL2Q99435 816 aa10.06□□□□□ -0.8
PKP4-208ENST00000462335 ULBP1Q9BZM6 244 aa10.06□□□□□ -0.8
PKP4-208ENST00000462335 SMOC2Q9H3U7 446 aa10.06□□□□□ -0.8
PKP4-208ENST00000462335 C8orf33Q9H7E9 229 aaPredicted RBP10.06□□□□□ -0.8
PKP4-208ENST00000462335 CNGB3Q9NQW8 809 aa10.06□□□□□ -0.8
PKP4-208ENST00000462335 OLA1Q9NTK5 396 aaKnown RBP10.06□□□□□ -0.8
PKP4-208ENST00000462335 TMEM30AQ9NV96 361 aa10.06□□□□□ -0.8
PKP4-208ENST00000462335 CFAP97Q9P2B7 532 aa10.06□□□□□ -0.8
PKP4-208ENST00000462335 TBC1D14Q9P2M4 693 aa10.06□□□□□ -0.8
PKP4-208ENST00000462335 ARHGAP26Q9UNA1 814 aa10.06□□□□□ -0.8
PKP4-208ENST00000462335 FHOD1Q9Y613 1164 aa10.06□□□□□ -0.8
PKP4-208ENST00000462335 NCANO14594 1321 aa10.06□□□□□ -0.8
PKP4-208ENST00000462335 PTPRDP23468 1912 aa10.05□□□□□ -0.8
PKP4-208ENST00000462335 LEFTY2O00292 366 aa10.05□□□□□ -0.8
PKP4-208ENST00000462335 COCHO43405 550 aa10.05□□□□□ -0.8
PKP4-208ENST00000462335 PRAMEF12O95522 483 aa10.05□□□□□ -0.8
PKP4-208ENST00000462335 NFATC1O95644 943 aa10.05□□□□□ -0.8
PKP4-208ENST00000462335 CALCAP01258 141 aa10.05□□□□□ -0.8
PKP4-208ENST00000462335 GLULP15104 373 aa10.05□□□□□ -0.8
PKP4-208ENST00000462335 ZNF18P17022 549 aa10.05□□□□□ -0.8
PKP4-208ENST00000462335 ZNF132P52740 706 aa10.05□□□□□ -0.8
PKP4-208ENST00000462335 COG7P83436 770 aa10.05□□□□□ -0.8
PKP4-208ENST00000462335 FANCCQ00597 558 aa10.05□□□□□ -0.8
PKP4-208ENST00000462335 PRKCQQ04759 706 aa10.05□□□□□ -0.8
PKP4-208ENST00000462335 EFEMP1Q12805 493 aa10.05□□□□□ -0.8
PKP4-208ENST00000462335 TSR1Q2NL82 804 aaKnown RBP10.05□□□□□ -0.8
PKP4-208ENST00000462335 TAF3Q5VWG9 929 aa10.05□□□□□ -0.8
PKP4-208ENST00000462335 DENND1BQ6P3S1 775 aa10.05□□□□□ -0.8
PKP4-208ENST00000462335 LRSAM1Q6UWE0 723 aa10.05□□□□□ -0.8
PKP4-208ENST00000462335 TPRG1Q6ZUI0 275 aa10.05□□□□□ -0.8
PKP4-208ENST00000462335 GPRIN1Q7Z2K8 1008 aa10.05□□□□□ -0.8
PKP4-208ENST00000462335 SLC47A2Q86VL8 602 aa10.05□□□□□ -0.8
PKP4-208ENST00000462335 TTC30AQ86WT1 665 aa10.05□□□□□ -0.8
PKP4-208ENST00000462335 MIB1Q86YT6 1006 aa10.05□□□□□ -0.8
PKP4-208ENST00000462335 PASD1Q8IV76 773 aa10.05□□□□□ -0.8
PKP4-208ENST00000462335 FBXL6Q8N531 539 aa10.05□□□□□ -0.8
PKP4-208ENST00000462335 UBR7Q8N806 425 aa10.05□□□□□ -0.8
PKP4-208ENST00000462335 KCTD13Q8WZ19 329 aa10.05□□□□□ -0.8
PKP4-208ENST00000462335 ZFYVE19Q96K21 471 aa10.05□□□□□ -0.8
PKP4-208ENST00000462335 NUP58Q9BVL2 599 aa10.05□□□□□ -0.8
PKP4-208ENST00000462335 CCSER2Q9H7U1 834 aa10.05□□□□□ -0.8
PKP4-208ENST00000462335 SIX2Q9NPC8 291 aa10.05□□□□□ -0.8
PKP4-208ENST00000462335 ABCC13Q9NSE7 274 aa10.05□□□□□ -0.8
PKP4-208ENST00000462335 CLIC5Q9NZA1 410 aa10.05□□□□□ -0.8
PKP4-208ENST00000462335 IL37Q9NZH6 218 aa10.05□□□□□ -0.8
PKP4-208ENST00000462335 RASAL2Q9UJF2 1139 aa10.05□□□□□ -0.8
PKP4-208ENST00000462335 CNTN6Q9UQ52 1028 aa10.05□□□□□ -0.8
PKP4-208ENST00000462335 CCL26Q9Y258 94 aa10.05□□□□□ -0.8
PKP4-208ENST00000462335 SIT1Q9Y3P8 196 aa10.05□□□□□ -0.8
PKP4-208ENST00000462335 HCN4Q9Y3Q4 1203 aa10.05□□□□□ -0.8
PKP4-208ENST00000462335 FAM170BA6NMN3 283 aa10.04□□□□□ -0.8
PKP4-208ENST00000462335 HHLA1C9JL84 531 aa10.04□□□□□ -0.8
PKP4-208ENST00000462335 HMBSP08397 361 aa10.04□□□□□ -0.8
PKP4-208ENST00000462335 CYP11B1P15538 503 aa10.04□□□□□ -0.8
PKP4-208ENST00000462335 FCARP24071 287 aa10.04□□□□□ -0.8
PKP4-208ENST00000462335 SOX5P35711 763 aa10.04□□□□□ -0.8
PKP4-208ENST00000462335 HARS2P49590 506 aaKnown RBP10.04□□□□□ -0.8
PKP4-208ENST00000462335 KLK7P49862 253 aa10.04□□□□□ -0.8
PKP4-208ENST00000462335 SLC7A9P82251 487 aa10.04□□□□□ -0.8
PKP4-208ENST00000462335 RUNX3Q13761 415 aa10.04□□□□□ -0.8
PKP4-208ENST00000462335 IQCB1Q15051 598 aa10.04□□□□□ -0.8
PKP4-208ENST00000462335 SNX30Q5VWJ9 437 aa10.04□□□□□ -0.8
PKP4-208ENST00000462335 BSPRYQ5W0U4 402 aa10.04□□□□□ -0.8
PKP4-208ENST00000462335 ASTLQ6HA08 431 aaPredicted RBP10.04□□□□□ -0.8
PKP4-208ENST00000462335 OR6B2Q6IFH4 312 aa10.04□□□□□ -0.8
PKP4-208ENST00000462335 PMF1Q6P1K2 205 aa10.04□□□□□ -0.8
PKP4-208ENST00000462335 NUDT18Q6ZVK8 323 aa10.04□□□□□ -0.8
PKP4-208ENST00000462335 ERICH1Q86X53 443 aa10.04□□□□□ -0.8
PKP4-208ENST00000462335 SCUBE3Q8IX30 993 aa10.04□□□□□ -0.8
PKP4-208ENST00000462335 FAM71AQ8IYT1 594 aa10.04□□□□□ -0.8
PKP4-208ENST00000462335 RNF214Q8ND24 703 aa10.04□□□□□ -0.8
PKP4-208ENST00000462335 STK32AQ8WU08 396 aa10.04□□□□□ -0.8
PKP4-208ENST00000462335 SLC35F5Q8WV83 523 aa10.04□□□□□ -0.8
PKP4-208ENST00000462335 OSCP1Q8WVF1 389 aa10.04□□□□□ -0.8
PKP4-208ENST00000462335 IRGQQ8WZA9 623 aa10.04□□□□□ -0.8
PKP4-208ENST00000462335 FAM3CQ92520 227 aa10.04□□□□□ -0.8
PKP4-208ENST00000462335 RNF34Q969K3 372 aa10.04□□□□□ -0.8
PKP4-208ENST00000462335 MSANTD3Q96H12 275 aa10.04□□□□□ -0.8
PKP4-208ENST00000462335 PPP1R13BQ96KQ4 1090 aa10.04□□□□□ -0.8
PKP4-208ENST00000462335 ERGIC2Q96RQ1 377 aa10.04□□□□□ -0.8
PKP4-208ENST00000462335 SLC22A12Q96S37 553 aa10.04□□□□□ -0.8
PKP4-208ENST00000462335 LRFN3Q9BTN0 628 aa10.04□□□□□ -0.8
PKP4-208ENST00000462335 FUCA2Q9BTY2 467 aa10.04□□□□□ -0.8
PKP4-208ENST00000462335 DCLK3Q9C098 648 aa10.04□□□□□ -0.8
PKP4-208ENST00000462335 RNF38Q9H0F5 515 aa10.04□□□□□ -0.8
PKP4-208ENST00000462335 EBF3Q9H4W6 596 aa10.04□□□□□ -0.8
PKP4-208ENST00000462335 TBC1D17Q9HA65 648 aa10.04□□□□□ -0.8
PKP4-208ENST00000462335 RTN4Q9NQC3 1192 aaKnown RBP10.04□□□□□ -0.8
PKP4-208ENST00000462335 HEBP1Q9NRV9 189 aa10.04□□□□□ -0.8
PKP4-208ENST00000462335 MARCH2Q9P0N8 246 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms