RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 CYP17A1P05093 508 aa9.69□□□□□ -0.86
BRCA1-207ENST00000461798 TRIM49P0CI25 452 aa9.69□□□□□ -0.86
BRCA1-207ENST00000461798 TRIM49CP0CI26 452 aa9.69□□□□□ -0.86
BRCA1-207ENST00000461798 MBL2P11226 248 aaPredicted RBP9.69□□□□□ -0.86
BRCA1-207ENST00000461798 CCDC130P13994 396 aa9.69□□□□□ -0.86
BRCA1-207ENST00000461798 TRIM21P19474 475 aaKnown RBP9.69□□□□□ -0.86
BRCA1-207ENST00000461798 PTPRDP23468 1912 aa9.69□□□□□ -0.86
BRCA1-207ENST00000461798 HOXC13P31276 330 aa9.69□□□□□ -0.86
BRCA1-207ENST00000461798 EIF2DP41214 584 aaKnown RBP9.69□□□□□ -0.86
BRCA1-207ENST00000461798 PIK3CAP42336 1068 aa9.69□□□□□ -0.86
BRCA1-207ENST00000461798 LMNB2Q03252 620 aa9.69□□□□□ -0.86
BRCA1-207ENST00000461798 PNOCQ13519 176 aa9.69□□□□□ -0.86
BRCA1-207ENST00000461798 DHCR24Q15392 516 aa9.69□□□□□ -0.86
BRCA1-207ENST00000461798 ZNF658Q5TYW1 1059 aaPredicted RBP9.69□□□□□ -0.86
BRCA1-207ENST00000461798 HEATR6Q6AI08 1181 aaKnown RBP9.69□□□□□ -0.86
BRCA1-207ENST00000461798 ZNF276Q8N554 614 aa9.69□□□□□ -0.86
BRCA1-207ENST00000461798 GAB3Q8WWW8 586 aa9.69□□□□□ -0.86
BRCA1-207ENST00000461798 CYFIP2Q96F07 1278 aa9.69□□□□□ -0.86
BRCA1-207ENST00000461798 LOXL4Q96JB6 756 aa9.69□□□□□ -0.86
BRCA1-207ENST00000461798 TWNKQ96RR1 684 aa9.69□□□□□ -0.86
BRCA1-207ENST00000461798 NIF3L1Q9GZT8 377 aa9.69□□□□□ -0.86
BRCA1-207ENST00000461798 PARD6AQ9NPB6 346 aa9.69□□□□□ -0.86
BRCA1-207ENST00000461798 KRT82Q9NSB4 513 aa9.69□□□□□ -0.86
BRCA1-207ENST00000461798 SMPD4Q9NXE4 827 aa9.69□□□□□ -0.86
BRCA1-207ENST00000461798 CFAP97Q9P2B7 532 aa9.69□□□□□ -0.86
BRCA1-207ENST00000461798 HMGXB4Q9UGU5 601 aa9.69□□□□□ -0.86
BRCA1-207ENST00000461798 EBF1Q9UH73 591 aa9.69□□□□□ -0.86
BRCA1-207ENST00000461798 SCML2Q9UQR0 700 aa9.69□□□□□ -0.86
BRCA1-207ENST00000461798 ANAPC1Q9H1A4 1944 aa9.68□□□□□ -0.86
BRCA1-207ENST00000461798 FOXD2O60548 495 aaPredicted RBP9.68□□□□□ -0.86
BRCA1-207ENST00000461798 GREM1O60565 184 aa9.68□□□□□ -0.86
BRCA1-207ENST00000461798 SMC2O95347 1197 aa9.68□□□□□ -0.86
BRCA1-207ENST00000461798 FAM200BP0CF97 657 aa9.68□□□□□ -0.86
BRCA1-207ENST00000461798 PRCPP42785 496 aa9.68□□□□□ -0.86
BRCA1-207ENST00000461798 MAP3K7CLP57077 242 aa9.68□□□□□ -0.86
BRCA1-207ENST00000461798 MRPS21P82921 87 aaKnown RBP9.68□□□□□ -0.86
BRCA1-207ENST00000461798 FKBP3Q00688 224 aaKnown RBP9.68□□□□□ -0.86
BRCA1-207ENST00000461798 IFRD2Q12894 506 aaPredicted RBP9.68□□□□□ -0.86
BRCA1-207ENST00000461798 SRSF5Q13243 272 aaKnown RBP9.68□□□□□ -0.86
BRCA1-207ENST00000461798 ORC1Q13415 861 aa9.68□□□□□ -0.86
BRCA1-207ENST00000461798 CSRP2Q16527 193 aa9.68□□□□□ -0.86
BRCA1-207ENST00000461798 RSPO4Q2I0M5 234 aaPredicted RBP9.68□□□□□ -0.86
BRCA1-207ENST00000461798 KLHDC10Q6PID8 442 aa9.68□□□□□ -0.86
BRCA1-207ENST00000461798 PRR23BQ6ZRT6 265 aa9.68□□□□□ -0.86
BRCA1-207ENST00000461798 CLEC20AQ6ZU45 233 aa9.68□□□□□ -0.86
BRCA1-207ENST00000461798 HTR3DQ70Z44 454 aa9.68□□□□□ -0.86
BRCA1-207ENST00000461798 CACNA2D4Q7Z3S7 1137 aa9.68□□□□□ -0.86
BRCA1-207ENST00000461798 SMYD4Q8IYR2 804 aaPredicted RBP9.68□□□□□ -0.86
BRCA1-207ENST00000461798 CCDC150Q8NCX0 1101 aa9.68□□□□□ -0.86
BRCA1-207ENST00000461798 FBXL13Q8NEE6 735 aa9.68□□□□□ -0.86
BRCA1-207ENST00000461798 TTC16Q8NEE8 873 aa9.68□□□□□ -0.86
BRCA1-207ENST00000461798 USP33Q8TEY7 942 aa9.68□□□□□ -0.86
BRCA1-207ENST00000461798 SEMA4DQ92854 862 aa9.68□□□□□ -0.86
BRCA1-207ENST00000461798 ACDQ96AP0 544 aa9.68□□□□□ -0.86
BRCA1-207ENST00000461798 ZC3H10Q96K80 434 aaKnown RBP9.68□□□□□ -0.86
BRCA1-207ENST00000461798 PNKPQ96T60 521 aa9.68□□□□□ -0.86
BRCA1-207ENST00000461798 DUSP16Q9BY84 665 aa9.68□□□□□ -0.86
BRCA1-207ENST00000461798 UBXN6Q9BZV1 441 aa9.68□□□□□ -0.86
BRCA1-207ENST00000461798 DNAI2Q9GZS0 605 aa9.68□□□□□ -0.86
BRCA1-207ENST00000461798 CCSER2Q9H7U1 834 aa9.68□□□□□ -0.86
BRCA1-207ENST00000461798 CYLDQ9NQC7 956 aa9.68□□□□□ -0.86
BRCA1-207ENST00000461798 TLR8Q9NR97 1041 aaKnown RBP9.68□□□□□ -0.86
BRCA1-207ENST00000461798 FAM49BQ9NUQ9 324 aa9.68□□□□□ -0.86
BRCA1-207ENST00000461798 RAB20Q9NX57 234 aa9.68□□□□□ -0.86
BRCA1-207ENST00000461798 GMIPQ9P107 970 aa9.68□□□□□ -0.86
BRCA1-207ENST00000461798 COQ4Q9Y3A0 265 aa9.68□□□□□ -0.86
BRCA1-207ENST00000461798 PCDHA5Q9Y5H7 936 aa9.68□□□□□ -0.86
BRCA1-207ENST00000461798 C2orf72A6NCS6 295 aa9.67□□□□□ -0.86
BRCA1-207ENST00000461798 GOLGA6L4A6NEF3 574 aa9.67□□□□□ -0.86
BRCA1-207ENST00000461798 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.67□□□□□ -0.86
BRCA1-207ENST00000461798 AXIN1O15169 862 aa9.67□□□□□ -0.86
BRCA1-207ENST00000461798 SLC16A3O15427 465 aaKnown RBP9.67□□□□□ -0.86
BRCA1-207ENST00000461798 HOXC11O43248 304 aaPredicted RBP9.67□□□□□ -0.86
BRCA1-207ENST00000461798 TLR5O60602 858 aa9.67□□□□□ -0.86
BRCA1-207ENST00000461798 RPP40O75818 363 aaKnown RBP9.67□□□□□ -0.86
BRCA1-207ENST00000461798 CLSTN1O94985 981 aa9.67□□□□□ -0.86
BRCA1-207ENST00000461798 APBB3O95704 486 aa9.67□□□□□ -0.86
BRCA1-207ENST00000461798 ADH1CP00326 375 aa9.67□□□□□ -0.86
BRCA1-207ENST00000461798 EPB41P11171 864 aaKnown RBP9.67□□□□□ -0.86
BRCA1-207ENST00000461798 GRIA2P42262 883 aa9.67□□□□□ -0.86
BRCA1-207ENST00000461798 TNFRSF4P43489 277 aa9.67□□□□□ -0.86
BRCA1-207ENST00000461798 SLC6A11P48066 632 aa9.67□□□□□ -0.86
BRCA1-207ENST00000461798 PGFP49763 221 aa9.67□□□□□ -0.86
BRCA1-207ENST00000461798 MXI1P50539 228 aa9.67□□□□□ -0.86
BRCA1-207ENST00000461798 KIF11P52732 1056 aa9.67□□□□□ -0.86
BRCA1-207ENST00000461798 GAD2Q05329 585 aa9.67□□□□□ -0.86
BRCA1-207ENST00000461798 LRRC63Q05C16 580 aa9.67□□□□□ -0.86
BRCA1-207ENST00000461798 SPEM2Q0P670 501 aa9.67□□□□□ -0.86
BRCA1-207ENST00000461798 DMC1Q14565 340 aa9.67□□□□□ -0.86
BRCA1-207ENST00000461798 LPAL2Q16609 132 aa9.67□□□□□ -0.86
BRCA1-207ENST00000461798 HSF5Q4G112 596 aaPredicted RBP9.67□□□□□ -0.86
BRCA1-207ENST00000461798 ANKRD40Q6AI12 368 aa9.67□□□□□ -0.86
BRCA1-207ENST00000461798 FOXR2Q6PJQ5 311 aa9.67□□□□□ -0.86
BRCA1-207ENST00000461798 CEP68Q76N32 757 aa9.67□□□□□ -0.86
BRCA1-207ENST00000461798 FAM160A2Q8N612 972 aaPredicted RBP9.67□□□□□ -0.86
BRCA1-207ENST00000461798 RPLP0P6Q8NHW5 317 aa9.67□□□□□ -0.86
BRCA1-207ENST00000461798 KLF16Q9BXK1 252 aaPredicted RBP9.67□□□□□ -0.86
BRCA1-207ENST00000461798 SEMA4GQ9NTN9 838 aa9.67□□□□□ -0.86
BRCA1-207ENST00000461798 USP3Q9Y6I4 520 aa9.67□□□□□ -0.86
BRCA1-207ENST00000461798 ZNF638Q14966 1978 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms