RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 C5orf42Q9H799 3197 aa15.95■□□□□ 0.14
TMEM39A-203ENST00000461654 GRID2IPA4D2P6 1211 aa15.95■□□□□ 0.14
TMEM39A-203ENST00000461654 TMEM110-MUSTN1A8MSY1 372 aa15.95■□□□□ 0.14
TMEM39A-203ENST00000461654 C2CD4DB7Z1M9 353 aa15.95■□□□□ 0.14
TMEM39A-203ENST00000461654 E5RJQ4 531 aa15.95■□□□□ 0.14
TMEM39A-203ENST00000461654 BUB1BO60566 1050 aaPredicted RBP15.95■□□□□ 0.14
TMEM39A-203ENST00000461654 ERBB2P04626 1255 aa15.95■□□□□ 0.14
TMEM39A-203ENST00000461654 KRT3P12035 628 aa15.95■□□□□ 0.14
TMEM39A-203ENST00000461654 ARPP19P56211 112 aa15.95■□□□□ 0.14
TMEM39A-203ENST00000461654 GSCP56915 257 aaPredicted RBP15.95■□□□□ 0.14
TMEM39A-203ENST00000461654 MAP3K7CLP57077 242 aa15.95■□□□□ 0.14
TMEM39A-203ENST00000461654 MESDQ14696 234 aa15.95■□□□□ 0.14
TMEM39A-203ENST00000461654 RTP2Q5QGT7 225 aa15.95■□□□□ 0.14
TMEM39A-203ENST00000461654 CLEC20AQ6ZU45 233 aa15.95■□□□□ 0.14
TMEM39A-203ENST00000461654 PAQR9Q6ZVX9 377 aa15.95■□□□□ 0.14
TMEM39A-203ENST00000461654 TMEM110Q86TL2 294 aa15.95■□□□□ 0.14
TMEM39A-203ENST00000461654 PIGZQ86VD9 579 aa15.95■□□□□ 0.14
TMEM39A-203ENST00000461654 XYLT1Q86Y38 959 aa15.95■□□□□ 0.14
TMEM39A-203ENST00000461654 SIX6OS1Q8N1H7 587 aa15.95■□□□□ 0.14
TMEM39A-203ENST00000461654 KCTD13Q8WZ19 329 aa15.95■□□□□ 0.14
TMEM39A-203ENST00000461654 FUBP3Q96I24 572 aaKnown RBP eCLIP15.95■□□□□ 0.14
TMEM39A-203ENST00000461654 PKMYT1Q99640 499 aa15.95■□□□□ 0.14
TMEM39A-203ENST00000461654 DMAP1Q9NPF5 467 aaPredicted RBP15.95■□□□□ 0.14
TMEM39A-203ENST00000461654 MAN1C1Q9NR34 630 aa15.95■□□□□ 0.14
TMEM39A-203ENST00000461654 CHORDC1Q9UHD1 332 aaPredicted RBP15.95■□□□□ 0.14
TMEM39A-203ENST00000461654 IP6K2Q9UHH9 426 aa15.95■□□□□ 0.14
TMEM39A-203ENST00000461654 RAPGEFL1Q9UHV5 662 aa15.95■□□□□ 0.14
TMEM39A-203ENST00000461654 AMFRQ9UKV5 643 aa15.95■□□□□ 0.14
TMEM39A-203ENST00000461654 PCDHB5Q9Y5E4 795 aa15.95■□□□□ 0.14
TMEM39A-203ENST00000461654 CCDC195A0A1B0GUA6 201 aa15.94■□□□□ 0.14
TMEM39A-203ENST00000461654 SIGLEC16A6NMB1 481 aa15.94■□□□□ 0.14
TMEM39A-203ENST00000461654 TGM5O43548 720 aa15.94■□□□□ 0.14
TMEM39A-203ENST00000461654 URI1O94763 535 aaPredicted RBP15.94■□□□□ 0.14
TMEM39A-203ENST00000461654 LCP1P13796 627 aa15.94■□□□□ 0.14
TMEM39A-203ENST00000461654 BDNFP23560 247 aa15.94■□□□□ 0.14
TMEM39A-203ENST00000461654 TUBB2AQ13885 445 aa15.94■□□□□ 0.14
TMEM39A-203ENST00000461654 PSMD5Q16401 504 aa15.94■□□□□ 0.14
TMEM39A-203ENST00000461654 CCDC142Q17RM4 750 aa15.94■□□□□ 0.14
TMEM39A-203ENST00000461654 FAM102AQ5T9C2 384 aaPredicted RBP15.94■□□□□ 0.14
TMEM39A-203ENST00000461654 LRRTM3Q86VH5 581 aa15.94■□□□□ 0.14
TMEM39A-203ENST00000461654 C2orf15Q8WU43 125 aaKnown RBP15.94■□□□□ 0.14
TMEM39A-203ENST00000461654 MCRS1Q96EZ8 462 aa15.94■□□□□ 0.14
TMEM39A-203ENST00000461654 TMEM209Q96SK2 561 aa15.94■□□□□ 0.14
TMEM39A-203ENST00000461654 CLSTN3Q9BQT9 956 aa15.94■□□□□ 0.14
TMEM39A-203ENST00000461654 TUBB2BQ9BVA1 445 aa15.94■□□□□ 0.14
TMEM39A-203ENST00000461654 ZDHHC7Q9NXF8 308 aa15.94■□□□□ 0.14
TMEM39A-203ENST00000461654 ABI2Q9NYB9 513 aaPredicted RBP15.94■□□□□ 0.14
TMEM39A-203ENST00000461654 BACE2Q9Y5Z0 518 aa15.94■□□□□ 0.14
TMEM39A-203ENST00000461654 TMEM191CA6NGB0 347 aa15.93■□□□□ 0.14
TMEM39A-203ENST00000461654 TULP2O00295 520 aa15.93■□□□□ 0.14
TMEM39A-203ENST00000461654 PIK3R2O00459 728 aa15.93■□□□□ 0.14
TMEM39A-203ENST00000461654 SART1O43290 800 aaKnown RBP15.93■□□□□ 0.14
TMEM39A-203ENST00000461654 SPOPO43791 374 aa15.93■□□□□ 0.14
TMEM39A-203ENST00000461654 FBXO21O94952 628 aa15.93■□□□□ 0.14
TMEM39A-203ENST00000461654 FTCDO95954 541 aa15.93■□□□□ 0.14
TMEM39A-203ENST00000461654 OR4Q2P0C623 313 aa15.93■□□□□ 0.14
TMEM39A-203ENST00000461654 SCNN1AP37088 669 aa15.93■□□□□ 0.14
TMEM39A-203ENST00000461654 GRIK1P39086 918 aa15.93■□□□□ 0.14
TMEM39A-203ENST00000461654 SLC1A1P43005 524 aa15.93■□□□□ 0.14
TMEM39A-203ENST00000461654 SLC6A3Q01959 620 aa15.93■□□□□ 0.14
TMEM39A-203ENST00000461654 SIGLEC14Q08ET2 396 aa15.93■□□□□ 0.14
TMEM39A-203ENST00000461654 GPR17Q13304 367 aa15.93■□□□□ 0.14
TMEM39A-203ENST00000461654 RPS6KA1Q15418 735 aa15.93■□□□□ 0.14
TMEM39A-203ENST00000461654 CFAP221Q4G0U5 840 aa15.93■□□□□ 0.14
TMEM39A-203ENST00000461654 PRSS55Q6UWB4 352 aaPredicted RBP15.93■□□□□ 0.14
TMEM39A-203ENST00000461654 VSTM1Q6UX27 236 aa15.93■□□□□ 0.14
TMEM39A-203ENST00000461654 CCDC149Q6ZUS6 474 aa15.93■□□□□ 0.14
TMEM39A-203ENST00000461654 HFE2Q6ZVN8 426 aa15.93■□□□□ 0.14
TMEM39A-203ENST00000461654 FAM183BPQ6ZVS7 135 aa15.93■□□□□ 0.14
TMEM39A-203ENST00000461654 OTOP3Q7RTS5 596 aa15.93■□□□□ 0.14
TMEM39A-203ENST00000461654 SLFN11Q7Z7L1 901 aa15.93■□□□□ 0.14
TMEM39A-203ENST00000461654 LRRC57Q8N9N7 239 aa15.93■□□□□ 0.14
TMEM39A-203ENST00000461654 TDRD5Q8NAT2 981 aaKnown RBP15.93■□□□□ 0.14
TMEM39A-203ENST00000461654 SPPL2BQ8TCT7 592 aa15.93■□□□□ 0.14
TMEM39A-203ENST00000461654 MCEEQ96PE7 176 aa15.93■□□□□ 0.14
TMEM39A-203ENST00000461654 KCNH6Q9H252 994 aa15.93■□□□□ 0.14
TMEM39A-203ENST00000461654 CSNK1G1Q9HCP0 422 aa15.93■□□□□ 0.14
TMEM39A-203ENST00000461654 WDR6Q9NNW5 1121 aaKnown RBP15.93■□□□□ 0.14
TMEM39A-203ENST00000461654 ABCB6Q9NP58 842 aa15.93■□□□□ 0.14
TMEM39A-203ENST00000461654 TMLHEQ9NVH6 421 aa15.93■□□□□ 0.14
TMEM39A-203ENST00000461654 MTRRQ9UBK8 725 aa15.93■□□□□ 0.14
TMEM39A-203ENST00000461654 TSC2P49815 1807 aa15.93■□□□□ 0.14
TMEM39A-203ENST00000461654 TMEM221A6NGB7 291 aa15.92■□□□□ 0.14
TMEM39A-203ENST00000461654 SPDYE4A6NLX3 237 aa15.92■□□□□ 0.14
TMEM39A-203ENST00000461654 MIF4GDA9UHW6 222 aaKnown RBP15.92■□□□□ 0.14
TMEM39A-203ENST00000461654 M0R296 226 aa15.92■□□□□ 0.14
TMEM39A-203ENST00000461654 ENC1O14682 589 aa15.92■□□□□ 0.14
TMEM39A-203ENST00000461654 TRIM66O15016 1216 aa15.92■□□□□ 0.14
TMEM39A-203ENST00000461654 PROSCO94903 275 aa15.92■□□□□ 0.14
TMEM39A-203ENST00000461654 RPL34P49207 117 aaKnown RBP15.92■□□□□ 0.14
TMEM39A-203ENST00000461654 ADIGQ0VDE8 80 aa15.92■□□□□ 0.14
TMEM39A-203ENST00000461654 RAB33AQ14088 237 aa15.92■□□□□ 0.14
TMEM39A-203ENST00000461654 EFHC1Q5JVL4 640 aa15.92■□□□□ 0.14
TMEM39A-203ENST00000461654 MEI1Q5TIA1 1274 aa15.92■□□□□ 0.14
TMEM39A-203ENST00000461654 RTL10Q7L3V2 364 aa15.92■□□□□ 0.14
TMEM39A-203ENST00000461654 SCN4BQ8IWT1 228 aa15.92■□□□□ 0.14
TMEM39A-203ENST00000461654 SCUBE3Q8IX30 993 aa15.92■□□□□ 0.14
TMEM39A-203ENST00000461654 UBALD2Q8IYN6 164 aa15.92■□□□□ 0.14
TMEM39A-203ENST00000461654 UBL4BQ8N7F7 174 aa15.92■□□□□ 0.14
TMEM39A-203ENST00000461654 KREMEN2Q8NCW0 462 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms