RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 GOLGA8IPA6NC78 632 aa12.62□□□□□ -0.39
HCFC1-204ENST00000461098 GOLGA8JA6NMD2 632 aa12.62□□□□□ -0.39
HCFC1-204ENST00000461098 PRRT4C9JH25 899 aa12.62□□□□□ -0.39
HCFC1-204ENST00000461098 GREM1O60565 184 aa12.62□□□□□ -0.39
HCFC1-204ENST00000461098 PRB1P04280 392 aa12.62□□□□□ -0.39
HCFC1-204ENST00000461098 KRT18P05783 430 aaKnown RBP12.62□□□□□ -0.39
HCFC1-204ENST00000461098 MBL2P11226 248 aaPredicted RBP12.62□□□□□ -0.39
HCFC1-204ENST00000461098 ANXA13P27216 316 aa12.62□□□□□ -0.39
HCFC1-204ENST00000461098 DDIT3P35638 169 aa12.62□□□□□ -0.39
HCFC1-204ENST00000461098 CASP5P51878 434 aa12.62□□□□□ -0.39
HCFC1-204ENST00000461098 MAPRE1Q15691 268 aaKnown RBP12.62□□□□□ -0.39
HCFC1-204ENST00000461098 L1TD1Q5T7N2 865 aaKnown RBP12.62□□□□□ -0.39
HCFC1-204ENST00000461098 OR5B17Q8NGF7 314 aa12.62□□□□□ -0.39
HCFC1-204ENST00000461098 DNASE2BQ8WZ79 361 aa12.62□□□□□ -0.39
HCFC1-204ENST00000461098 LARP4BQ92615 738 aaKnown RBP12.62□□□□□ -0.39
HCFC1-204ENST00000461098 OTUB2Q96DC9 234 aa12.62□□□□□ -0.39
HCFC1-204ENST00000461098 MRGPRX1Q96LB2 322 aa12.62□□□□□ -0.39
HCFC1-204ENST00000461098 ZSCAN31Q96LW9 406 aaPredicted RBP12.62□□□□□ -0.39
HCFC1-204ENST00000461098 CBWD1Q9BRT8 395 aa12.62□□□□□ -0.39
HCFC1-204ENST00000461098 FGFBP2Q9BYJ0 223 aa12.62□□□□□ -0.39
HCFC1-204ENST00000461098 TRIM9Q9C026 710 aa12.62□□□□□ -0.39
HCFC1-204ENST00000461098 SPHK2Q9NRA0 654 aa12.62□□□□□ -0.39
HCFC1-204ENST00000461098 RAD54BQ9Y620 910 aa12.62□□□□□ -0.39
HCFC1-204ENST00000461098 C1QL1O75973 258 aa12.61□□□□□ -0.39
HCFC1-204ENST00000461098 ATXN1LP0C7T5 689 aaKnown RBP12.61□□□□□ -0.39
HCFC1-204ENST00000461098 GARTP22102 1010 aa12.61□□□□□ -0.39
HCFC1-204ENST00000461098 UBA7P41226 1012 aa12.61□□□□□ -0.39
HCFC1-204ENST00000461098 CYP4F3Q08477 520 aa12.61□□□□□ -0.39
HCFC1-204ENST00000461098 MDH1BQ5I0G3 518 aa12.61□□□□□ -0.39
HCFC1-204ENST00000461098 SNX30Q5VWJ9 437 aa12.61□□□□□ -0.39
HCFC1-204ENST00000461098 TDRD10Q5VZ19 366 aaKnown RBP12.61□□□□□ -0.39
HCFC1-204ENST00000461098 DYMQ7RTS9 669 aa12.61□□□□□ -0.39
HCFC1-204ENST00000461098 RGL4Q8IZJ4 473 aa12.61□□□□□ -0.39
HCFC1-204ENST00000461098 DNAJC19Q96DA6 116 aa12.61□□□□□ -0.39
HCFC1-204ENST00000461098 P2RY11Q96G91 374 aa12.61□□□□□ -0.39
HCFC1-204ENST00000461098 HPDLQ96IR7 371 aa12.61□□□□□ -0.39
HCFC1-204ENST00000461098 MRPL45Q9BRJ2 306 aaKnown RBP12.61□□□□□ -0.39
HCFC1-204ENST00000461098 ZDHHC5Q9C0B5 715 aa12.61□□□□□ -0.39
HCFC1-204ENST00000461098 INTS13Q9NVM9 706 aa12.61□□□□□ -0.39
HCFC1-204ENST00000461098 EHD2Q9NZN4 543 aa12.61□□□□□ -0.39
HCFC1-204ENST00000461098 SUSD2Q9UGT4 822 aa12.61□□□□□ -0.39
HCFC1-204ENST00000461098 ATMQ13315 3056 aa12.61□□□□□ -0.39
HCFC1-204ENST00000461098 TRABD2BA6NFA1 517 aa12.6□□□□□ -0.39
HCFC1-204ENST00000461098 WASH3PC4AMC7 463 aa12.6□□□□□ -0.39
HCFC1-204ENST00000461098 TULP1O00294 542 aaPredicted RBP12.6□□□□□ -0.39
HCFC1-204ENST00000461098 CLDN5O00501 218 aa12.6□□□□□ -0.39
HCFC1-204ENST00000461098 LDHAP00338 332 aaKnown RBP12.6□□□□□ -0.39
HCFC1-204ENST00000461098 PGFP49763 221 aa12.6□□□□□ -0.39
HCFC1-204ENST00000461098 ANO4Q32M45 955 aa12.6□□□□□ -0.39
HCFC1-204ENST00000461098 SYCP2LQ5T4T6 812 aa12.6□□□□□ -0.39
HCFC1-204ENST00000461098 BTBD8Q5XKL5 378 aa12.6□□□□□ -0.39
HCFC1-204ENST00000461098 MCTP1Q6DN14 999 aa12.6□□□□□ -0.39
HCFC1-204ENST00000461098 USP49Q70CQ1 688 aa12.6□□□□□ -0.39
HCFC1-204ENST00000461098 CHPFQ8IZ52 775 aa12.6□□□□□ -0.39
HCFC1-204ENST00000461098 KRI1Q8N9T8 703 aaKnown RBP12.6□□□□□ -0.39
HCFC1-204ENST00000461098 C1orf216Q8TAB5 229 aa12.6□□□□□ -0.39
HCFC1-204ENST00000461098 SCAMP5Q8TAC9 235 aa12.6□□□□□ -0.39
HCFC1-204ENST00000461098 FOXJ1Q92949 421 aa12.6□□□□□ -0.39
HCFC1-204ENST00000461098 SLITRK1Q96PX8 696 aa12.6□□□□□ -0.39
HCFC1-204ENST00000461098 ACCSQ96QU6 501 aa12.6□□□□□ -0.39
HCFC1-204ENST00000461098 KIF2CQ99661 725 aa12.6□□□□□ -0.39
HCFC1-204ENST00000461098 B3GNT5Q9BYG0 378 aa12.6□□□□□ -0.39
HCFC1-204ENST00000461098 ZNF518BQ9C0D4 1074 aa12.6□□□□□ -0.39
HCFC1-204ENST00000461098 DPEP3Q9H4B8 488 aa12.6□□□□□ -0.39
HCFC1-204ENST00000461098 PCIF1Q9H4Z3 704 aa12.6□□□□□ -0.39
HCFC1-204ENST00000461098 CCSER2Q9H7U1 834 aa12.6□□□□□ -0.39
HCFC1-204ENST00000461098 MRPL44Q9H9J2 332 aaKnown RBP12.6□□□□□ -0.39
HCFC1-204ENST00000461098 WSB2Q9NYS7 404 aaPredicted RBP12.6□□□□□ -0.39
HCFC1-204ENST00000461098 IL37Q9NZH6 218 aa12.6□□□□□ -0.39
HCFC1-204ENST00000461098 TBC1D7Q9P0N9 293 aa12.6□□□□□ -0.39
HCFC1-204ENST00000461098 CHORDC1Q9UHD1 332 aaPredicted RBP12.6□□□□□ -0.39
HCFC1-204ENST00000461098 FNDC3AQ9Y2H6 1198 aaKnown RBP12.6□□□□□ -0.39
HCFC1-204ENST00000461098 NFE2L3Q9Y4A8 694 aa12.6□□□□□ -0.39
HCFC1-204ENST00000461098 SHROOM3Q8TF72 1996 aa12.6□□□□□ -0.39
HCFC1-204ENST00000461098 A0A1B0GTW7 788 aa12.59□□□□□ -0.39
HCFC1-204ENST00000461098 KCNJ18B7U540 433 aa12.59□□□□□ -0.39
HCFC1-204ENST00000461098 CACNG3O60359 315 aa12.59□□□□□ -0.39
HCFC1-204ENST00000461098 NDUFS2O75306 463 aa12.59□□□□□ -0.39
HCFC1-204ENST00000461098 CILPO75339 1184 aa12.59□□□□□ -0.39
HCFC1-204ENST00000461098 CST3P01034 146 aaPredicted RBP12.59□□□□□ -0.39
HCFC1-204ENST00000461098 TMEM191BP0C7N4 346 aa12.59□□□□□ -0.39
HCFC1-204ENST00000461098 CISD3P0C7P0 127 aa12.59□□□□□ -0.39
HCFC1-204ENST00000461098 ZDHHC11BP0C7U3 371 aa12.59□□□□□ -0.39
HCFC1-204ENST00000461098 ZNF883P0CG24 379 aa12.59□□□□□ -0.39
HCFC1-204ENST00000461098 GNSP15586 552 aa12.59□□□□□ -0.39
HCFC1-204ENST00000461098 PTPN1P18031 435 aaKnown RBP12.59□□□□□ -0.39
HCFC1-204ENST00000461098 YWHAQP27348 245 aa12.59□□□□□ -0.39
HCFC1-204ENST00000461098 CD6P30203 668 aa12.59□□□□□ -0.39
HCFC1-204ENST00000461098 LONP1P36776 959 aaKnown RBP12.59□□□□□ -0.39
HCFC1-204ENST00000461098 IFRD2Q12894 506 aaPredicted RBP12.59□□□□□ -0.39
HCFC1-204ENST00000461098 MYO1EQ12965 1108 aa12.59□□□□□ -0.39
HCFC1-204ENST00000461098 PREPLQ4J6C6 727 aaPredicted RBP12.59□□□□□ -0.39
HCFC1-204ENST00000461098 WDR45BQ5MNZ6 344 aa12.59□□□□□ -0.39
HCFC1-204ENST00000461098 HS2ST1Q7LGA3 356 aa12.59□□□□□ -0.39
HCFC1-204ENST00000461098 METTL3Q86U44 580 aaKnown RBP12.59□□□□□ -0.39
HCFC1-204ENST00000461098 SCUBE3Q8IX30 993 aa12.59□□□□□ -0.39
HCFC1-204ENST00000461098 NUP93Q8N1F7 819 aa12.59□□□□□ -0.39
HCFC1-204ENST00000461098 SETD7Q8WTS6 366 aaKnown RBP12.59□□□□□ -0.39
HCFC1-204ENST00000461098 OVCA2Q8WZ82 227 aa12.59□□□□□ -0.39
HCFC1-204ENST00000461098 KCNK16Q96T55 309 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms