RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 ZNF840PA6NDX5 716 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 USP27XA6NNY8 438 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 CYP26A1O43174 497 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 TEX33O43247 280 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 MAGEA9P43362 315 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 JAM2P57087 298 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 CCZ1BP86790 482 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 CCZ1P86791 482 aaPredicted RBP11.66□□□□□ -0.54
APTX-209ENST00000460940 NR1I3Q14994 352 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 RAB41Q5JT25 222 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 STXBP5Q5T5C0 1151 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 SNX30Q5VWJ9 437 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 GPRIN1Q7Z2K8 1008 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 CMTM8Q8IZV2 173 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 ZNF606Q8WXB4 792 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 ZSWIM3Q96MP5 696 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 KIF9Q9HAQ2 790 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 ZFP14Q9HCL3 533 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 OBP2AQ9NY56 170 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 MYO6Q9UM54 1294 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 PCDHGC3Q9UN70 934 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.66□□□□□ -0.54
APTX-209ENST00000460940 USP3Q9Y6I4 520 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 NUMBLQ9Y6R0 609 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 EPHB6O15197 1021 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 DCXO43602 365 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 ZDHHC11BP0C7U3 371 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 SKILP12757 684 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 ALADP13716 330 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 FCARP24071 287 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 SOX5P35711 763 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 AVPR1AP37288 418 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 STAT1P42224 750 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 UBASH3AP57075 661 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 GSDMDP57764 484 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 IFRD2Q12894 506 aaPredicted RBP11.66□□□□□ -0.54
APTX-209ENST00000460940 TDGQ13569 410 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 ZNF268Q14587 947 aaPredicted RBP11.66□□□□□ -0.54
APTX-209ENST00000460940 ERCC6LQ2NKX8 1250 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 TTC31Q49AM3 519 aaPredicted RBP11.66□□□□□ -0.54
APTX-209ENST00000460940 PARM1Q6UWI2 310 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 UBALD2Q8IYN6 164 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 ARHGAP18Q8N392 663 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 UBA3Q8TBC4 463 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 STK32AQ8WU08 396 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 SLC35F5Q8WV83 523 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 FGF14Q92915 247 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 IQCDQ96DY2 449 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 HSFY1Q96LI6 401 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 SLC46A2Q9BY10 475 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 LRRC4Q9HBW1 653 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 TLR8Q9NR97 1041 aaKnown RBP11.66□□□□□ -0.54
APTX-209ENST00000460940 GMIPQ9P107 970 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 MUTYHQ9UIF7 546 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 JRKLQ9Y4A0 524 aa11.66□□□□□ -0.54
APTX-209ENST00000460940 CBFA2T2O43439 604 aa11.65□□□□□ -0.54
APTX-209ENST00000460940 ASGR2P07307 311 aa11.65□□□□□ -0.54
APTX-209ENST00000460940 USP17L7P0C7H9 530 aa11.65□□□□□ -0.54
APTX-209ENST00000460940 TXNDC8Q6A555 127 aa11.65□□□□□ -0.54
APTX-209ENST00000460940 POTEHQ6S545 545 aa11.65□□□□□ -0.54
APTX-209ENST00000460940 CACNA2D4Q7Z3S7 1137 aa11.65□□□□□ -0.54
APTX-209ENST00000460940 SLC47A2Q86VL8 602 aa11.65□□□□□ -0.54
APTX-209ENST00000460940 ARID3BQ8IVW6 561 aaPredicted RBP11.65□□□□□ -0.54
APTX-209ENST00000460940 SUGP1Q8IWZ8 645 aaKnown RBP11.65□□□□□ -0.54
APTX-209ENST00000460940 SIX6OS1Q8N1H7 587 aa11.65□□□□□ -0.54
APTX-209ENST00000460940 SCML4Q8N228 414 aa11.65□□□□□ -0.54
APTX-209ENST00000460940 MAB21L3Q8N8X9 362 aa11.65□□□□□ -0.54
APTX-209ENST00000460940 DEPDC1BQ8WUY9 529 aa11.65□□□□□ -0.54
APTX-209ENST00000460940 CDK5RAP1Q96SZ6 601 aaKnown RBP11.65□□□□□ -0.54
APTX-209ENST00000460940 EDEM3Q9BZQ6 932 aa11.65□□□□□ -0.54
APTX-209ENST00000460940 TRPC7Q9HCX4 862 aa11.65□□□□□ -0.54
APTX-209ENST00000460940 NLRC4Q9NPP4 1024 aa11.65□□□□□ -0.54
APTX-209ENST00000460940 CYLDQ9NQC7 956 aa11.65□□□□□ -0.54
APTX-209ENST00000460940 CEP83Q9Y592 693 aa11.65□□□□□ -0.54
APTX-209ENST00000460940 OBSL1O75147 1896 aa11.65□□□□□ -0.54
APTX-209ENST00000460940 NUP210Q8TEM1 1887 aaPredicted RBP11.64□□□□□ -0.55
APTX-209ENST00000460940 MYH10P35580 1976 aa11.64□□□□□ -0.55
APTX-209ENST00000460940 DPYSL4O14531 572 aa11.64□□□□□ -0.55
APTX-209ENST00000460940 OLFM2O95897 454 aa11.64□□□□□ -0.55
APTX-209ENST00000460940 OAS1P00973 400 aaKnown RBP11.64□□□□□ -0.55
APTX-209ENST00000460940 CALCAP01258 141 aa11.64□□□□□ -0.55
APTX-209ENST00000460940 CKMP06732 381 aa11.64□□□□□ -0.55
APTX-209ENST00000460940 CYP11B1P15538 503 aa11.64□□□□□ -0.55
APTX-209ENST00000460940 KRT9P35527 623 aa11.64□□□□□ -0.55
APTX-209ENST00000460940 GPD2P43304 727 aa11.64□□□□□ -0.55
APTX-209ENST00000460940 ACADSBP45954 432 aa11.64□□□□□ -0.55
APTX-209ENST00000460940 RPL34P49207 117 aaKnown RBP11.64□□□□□ -0.55
APTX-209ENST00000460940 TKTL1P51854 596 aa11.64□□□□□ -0.55
APTX-209ENST00000460940 ADIGQ0VDE8 80 aa11.64□□□□□ -0.55
APTX-209ENST00000460940 ARHGAP29Q52LW3 1261 aa11.64□□□□□ -0.55
APTX-209ENST00000460940 FIGNQ5HY92 759 aa11.64□□□□□ -0.55
APTX-209ENST00000460940 HECTD3Q5T447 861 aa11.64□□□□□ -0.55
APTX-209ENST00000460940 SWT1Q5T5J6 900 aaKnown RBP11.64□□□□□ -0.55
APTX-209ENST00000460940 DENND1BQ6P3S1 775 aa11.64□□□□□ -0.55
APTX-209ENST00000460940 TADA2BQ86TJ2 420 aa11.64□□□□□ -0.55
APTX-209ENST00000460940 ZNF677Q86XU0 584 aa11.64□□□□□ -0.55
APTX-209ENST00000460940 SLC44A3Q8N4M1 653 aa11.64□□□□□ -0.55
APTX-209ENST00000460940 CELF5Q8N6W0 485 aaKnown RBP11.64□□□□□ -0.55
APTX-209ENST00000460940 ZBTB9Q96C00 473 aa11.64□□□□□ -0.55
APTX-209ENST00000460940 NOX5Q96PH1 765 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms