RNA–Protein interactions for RNA: ENST00000460886.1

COL6A2-207, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 2

Gene COL6A2, Length 306 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-207ENST00000460886 CCL26Q9Y258 94 aa10.03□□□□□ -0.8
COL6A2-207ENST00000460886 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.03□□□□□ -0.8
COL6A2-207ENST00000460886 TADA3O75528 432 aa10.02□□□□□ -0.81
COL6A2-207ENST00000460886 ADRB1P08588 477 aa10.02□□□□□ -0.81
COL6A2-207ENST00000460886 ATP1A3P13637 1013 aa10.02□□□□□ -0.81
COL6A2-207ENST00000460886 CCDC130P13994 396 aa10.02□□□□□ -0.81
COL6A2-207ENST00000460886 ZNF18P17022 549 aa10.02□□□□□ -0.81
COL6A2-207ENST00000460886 TRIM21P19474 475 aaKnown RBP10.02□□□□□ -0.81
COL6A2-207ENST00000460886 PON1P27169 355 aa10.02□□□□□ -0.81
COL6A2-207ENST00000460886 AVPR1AP37288 418 aa10.02□□□□□ -0.81
COL6A2-207ENST00000460886 GRIK1P39086 918 aa10.02□□□□□ -0.81
COL6A2-207ENST00000460886 GPR15P49685 360 aa10.02□□□□□ -0.81
COL6A2-207ENST00000460886 LIMK1P53667 647 aa10.02□□□□□ -0.81
COL6A2-207ENST00000460886 RAD23BP54727 409 aa10.02□□□□□ -0.81
COL6A2-207ENST00000460886 YWHAEP62258 255 aaKnown RBP10.02□□□□□ -0.81
COL6A2-207ENST00000460886 APBA1Q02410 837 aa10.02□□□□□ -0.81
COL6A2-207ENST00000460886 SRSF5Q13243 272 aaKnown RBP10.02□□□□□ -0.81
COL6A2-207ENST00000460886 IQCB1Q15051 598 aa10.02□□□□□ -0.81
COL6A2-207ENST00000460886 LPAL2Q16609 132 aa10.02□□□□□ -0.81
COL6A2-207ENST00000460886 DDR2Q16832 855 aa10.02□□□□□ -0.81
COL6A2-207ENST00000460886 SDHAF4Q5VUM1 108 aa10.02□□□□□ -0.81
COL6A2-207ENST00000460886 FSTL4Q6MZW2 842 aa10.02□□□□□ -0.81
COL6A2-207ENST00000460886 PKN3Q6P5Z2 889 aa10.02□□□□□ -0.81
COL6A2-207ENST00000460886 TRIM65Q6PJ69 517 aa10.02□□□□□ -0.81
COL6A2-207ENST00000460886 PRR23BQ6ZRT6 265 aa10.02□□□□□ -0.81
COL6A2-207ENST00000460886 SCN4BQ8IWT1 228 aa10.02□□□□□ -0.81
COL6A2-207ENST00000460886 TTC39CQ8N584 583 aa10.02□□□□□ -0.81
COL6A2-207ENST00000460886 FAM160A2Q8N612 972 aaPredicted RBP10.02□□□□□ -0.81
COL6A2-207ENST00000460886 C12orf29Q8N999 325 aa10.02□□□□□ -0.81
COL6A2-207ENST00000460886 TTC8Q8TAM2 541 aa10.02□□□□□ -0.81
COL6A2-207ENST00000460886 GIPC2Q8TF65 315 aa10.02□□□□□ -0.81
COL6A2-207ENST00000460886 KAT5Q92993 513 aa10.02□□□□□ -0.81
COL6A2-207ENST00000460886 CEP295NLQ96MC4 621 aa10.02□□□□□ -0.81
COL6A2-207ENST00000460886 HEXIM2Q96MH2 286 aaKnown RBP10.02□□□□□ -0.81
COL6A2-207ENST00000460886 MED10Q9BTT4 135 aa10.02□□□□□ -0.81
COL6A2-207ENST00000460886 B3GNT5Q9BYG0 378 aa10.02□□□□□ -0.81
COL6A2-207ENST00000460886 ZNF518BQ9C0D4 1074 aa10.02□□□□□ -0.81
COL6A2-207ENST00000460886 ELOVL4Q9GZR5 314 aa10.02□□□□□ -0.81
COL6A2-207ENST00000460886 DNAI2Q9GZS0 605 aa10.02□□□□□ -0.81
COL6A2-207ENST00000460886 SMG9Q9H0W8 520 aaKnown RBP10.02□□□□□ -0.81
COL6A2-207ENST00000460886 CBX8Q9HC52 389 aa10.02□□□□□ -0.81
COL6A2-207ENST00000460886 UBE2TQ9NPD8 197 aaPredicted RBP10.02□□□□□ -0.81
COL6A2-207ENST00000460886 FAM49BQ9NUQ9 324 aa10.02□□□□□ -0.81
COL6A2-207ENST00000460886 UXTQ9UBK9 157 aaPredicted RBP10.02□□□□□ -0.81
COL6A2-207ENST00000460886 CNOT1A5YKK6 2376 aaKnown RBP10.01□□□□□ -0.81
COL6A2-207ENST00000460886 ZFHX4Q86UP3 3567 aa10.01□□□□□ -0.81
COL6A2-207ENST00000460886 USP24Q9UPU5 2620 aa10.01□□□□□ -0.81
COL6A2-207ENST00000460886 DCDC2BA2VCK2 349 aa10.01□□□□□ -0.81
COL6A2-207ENST00000460886 ATG13O75143 517 aa10.01□□□□□ -0.81
COL6A2-207ENST00000460886 TCF3P15923 654 aa10.01□□□□□ -0.81
COL6A2-207ENST00000460886 HOXC13P31276 330 aa10.01□□□□□ -0.81
COL6A2-207ENST00000460886 MAGEA11P43364 429 aa10.01□□□□□ -0.81
COL6A2-207ENST00000460886 COPB1P53618 953 aaKnown RBP10.01□□□□□ -0.81
COL6A2-207ENST00000460886 RPL10AP62906 217 aaKnown RBP10.01□□□□□ -0.81
COL6A2-207ENST00000460886 AMPD2Q01433 879 aa10.01□□□□□ -0.81
COL6A2-207ENST00000460886 GCNT1Q02742 428 aa10.01□□□□□ -0.81
COL6A2-207ENST00000460886 KCNMA1Q12791 1236 aa10.01□□□□□ -0.81
COL6A2-207ENST00000460886 USP4Q13107 963 aa10.01□□□□□ -0.81
COL6A2-207ENST00000460886 PDGFRLQ15198 375 aa10.01□□□□□ -0.81
COL6A2-207ENST00000460886 ZNF77Q15935 545 aa10.01□□□□□ -0.81
COL6A2-207ENST00000460886 TAF12Q16514 161 aa10.01□□□□□ -0.81
COL6A2-207ENST00000460886 TXNDC8Q6A555 127 aa10.01□□□□□ -0.81
COL6A2-207ENST00000460886 GJB7Q6PEY0 223 aa10.01□□□□□ -0.81
COL6A2-207ENST00000460886 TMEM270Q6UE05 265 aa10.01□□□□□ -0.81
COL6A2-207ENST00000460886 VSTM1Q6UX27 236 aa10.01□□□□□ -0.81
COL6A2-207ENST00000460886 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.01□□□□□ -0.81
COL6A2-207ENST00000460886 FAM35AQ86V20 835 aa10.01□□□□□ -0.81
COL6A2-207ENST00000460886 LUZP1Q86V48 1076 aa10.01□□□□□ -0.81
COL6A2-207ENST00000460886 FUKQ8N0W3 1084 aa10.01□□□□□ -0.81
COL6A2-207ENST00000460886 CAMKK1Q8N5S9 505 aa10.01□□□□□ -0.81
COL6A2-207ENST00000460886 MAB21L3Q8N8X9 362 aa10.01□□□□□ -0.81
COL6A2-207ENST00000460886 SLC4A11Q8NBS3 891 aa10.01□□□□□ -0.81
COL6A2-207ENST00000460886 STKLD1Q8NE28 680 aa10.01□□□□□ -0.81
COL6A2-207ENST00000460886 SLC2A14Q8TDB8 520 aa10.01□□□□□ -0.81
COL6A2-207ENST00000460886 GAB3Q8WWW8 586 aa10.01□□□□□ -0.81
COL6A2-207ENST00000460886 MRPS31Q92665 395 aaKnown RBP10.01□□□□□ -0.81
COL6A2-207ENST00000460886 CYFIP2Q96F07 1278 aa10.01□□□□□ -0.81
COL6A2-207ENST00000460886 TMEM176AQ96HP8 235 aa10.01□□□□□ -0.81
COL6A2-207ENST00000460886 ZC3H10Q96K80 434 aaKnown RBP10.01□□□□□ -0.81
COL6A2-207ENST00000460886 KREMEN1Q96MU8 473 aa10.01□□□□□ -0.81
COL6A2-207ENST00000460886 CNTNAP3BQ96NU0 1288 aa10.01□□□□□ -0.81
COL6A2-207ENST00000460886 CNTNAP3Q9BZ76 1288 aa10.01□□□□□ -0.81
COL6A2-207ENST00000460886 FAM124BQ9H5Z6 455 aaPredicted RBP10.01□□□□□ -0.81
COL6A2-207ENST00000460886 APEX2Q9UBZ4 518 aa10.01□□□□□ -0.81
COL6A2-207ENST00000460886 LIMA1Q9UHB6 759 aaKnown RBP10.01□□□□□ -0.81
COL6A2-207ENST00000460886 PCDHB4Q9Y5E5 795 aa10.01□□□□□ -0.81
COL6A2-207ENST00000460886 MAP1BP46821 2468 aaKnown RBP10.01□□□□□ -0.81
COL6A2-207ENST00000460886 ATP8B3O60423 1300 aa10.01□□□□□ -0.81
COL6A2-207ENST00000460886 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10□□□□□ -0.81
COL6A2-207ENST00000460886 LRRC10BA6NIK2 292 aa10□□□□□ -0.81
COL6A2-207ENST00000460886 F8VP50 259 aa10□□□□□ -0.81
COL6A2-207ENST00000460886 TM4SF5O14894 197 aa10□□□□□ -0.81
COL6A2-207ENST00000460886 TRIM66O15016 1216 aa10□□□□□ -0.81
COL6A2-207ENST00000460886 EPN2O95208 641 aa10□□□□□ -0.81
COL6A2-207ENST00000460886 CAVIN2O95810 425 aa10□□□□□ -0.81
COL6A2-207ENST00000460886 PFKLP17858 780 aa10□□□□□ -0.81
COL6A2-207ENST00000460886 ACO1P21399 889 aaKnown RBP10□□□□□ -0.81
COL6A2-207ENST00000460886 DRD1P21728 446 aa10□□□□□ -0.81
COL6A2-207ENST00000460886 ANXA13P27216 316 aa10□□□□□ -0.81
COL6A2-207ENST00000460886 ADORA2BP29275 332 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms