RNA–Protein interactions for RNA: ENST00000459963.5

NCSTN-209, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 1,246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-209ENST00000459963 SRSF6Q13247 344 aaKnown RBP8.66□□□□□ -1.02
NCSTN-209ENST00000459963 DMP1Q13316 513 aaPredicted RBP8.66□□□□□ -1.02
NCSTN-209ENST00000459963 FAM187BQ17R55 369 aa8.66□□□□□ -1.02
NCSTN-209ENST00000459963 XKR4Q5GH76 650 aa8.66□□□□□ -1.02
NCSTN-209ENST00000459963 EGFLAMQ63HQ2 1017 aa8.66□□□□□ -1.02
NCSTN-209ENST00000459963 CAPRIN2Q6IMN6 1127 aaKnown RBP8.66□□□□□ -1.02
NCSTN-209ENST00000459963 FILIP1Q7Z7B0 1213 aa8.66□□□□□ -1.02
NCSTN-209ENST00000459963 USP37Q86T82 979 aa8.66□□□□□ -1.02
NCSTN-209ENST00000459963 IGDCC4Q8TDY8 1250 aa8.66□□□□□ -1.02
NCSTN-209ENST00000459963 LRRC15Q8TF66 581 aa8.66□□□□□ -1.02
NCSTN-209ENST00000459963 FUCA2Q9BTY2 467 aa8.66□□□□□ -1.02
NCSTN-209ENST00000459963 NUP58Q9BVL2 599 aa8.66□□□□□ -1.02
NCSTN-209ENST00000459963 WRAP73Q9P2S5 460 aaPredicted RBP8.66□□□□□ -1.02
NCSTN-209ENST00000459963 TJP2Q9UDY2 1190 aa8.66□□□□□ -1.02
NCSTN-209ENST00000459963 ARHGAP26Q9UNA1 814 aa8.66□□□□□ -1.02
NCSTN-209ENST00000459963 MAGED2Q9UNF1 606 aaPredicted RBP8.66□□□□□ -1.02
NCSTN-209ENST00000459963 MED13LQ71F56 2210 aa8.66□□□□□ -1.02
NCSTN-209ENST00000459963 MYO18AQ92614 2054 aaKnown RBP8.65□□□□□ -1.02
NCSTN-209ENST00000459963 A0A1W2PNU3 283 aaPredicted RBP8.65□□□□□ -1.02
NCSTN-209ENST00000459963 hCG_1984214I3L0E3 225 aa8.65□□□□□ -1.02
NCSTN-209ENST00000459963 CAPN5O15484 640 aaPredicted RBP8.65□□□□□ -1.02
NCSTN-209ENST00000459963 CYP26A1O43174 497 aa8.65□□□□□ -1.02
NCSTN-209ENST00000459963 ADH1CP00326 375 aa8.65□□□□□ -1.02
NCSTN-209ENST00000459963 NFICP08651 508 aa8.65□□□□□ -1.02
NCSTN-209ENST00000459963 KRT7P08729 469 aa8.65□□□□□ -1.02
NCSTN-209ENST00000459963 ADH5P11766 374 aa8.65□□□□□ -1.02
NCSTN-209ENST00000459963 RXRAP19793 462 aa8.65□□□□□ -1.02
NCSTN-209ENST00000459963 EPHA8P29322 1005 aaPredicted RBP8.65□□□□□ -1.02
NCSTN-209ENST00000459963 YWHABP31946 246 aaKnown RBP8.65□□□□□ -1.02
NCSTN-209ENST00000459963 RPL10AP62906 217 aaKnown RBP8.65□□□□□ -1.02
NCSTN-209ENST00000459963 KCNAB2Q13303 367 aa8.65□□□□□ -1.02
NCSTN-209ENST00000459963 PRPF4BQ13523 1007 aaKnown RBP8.65□□□□□ -1.02
NCSTN-209ENST00000459963 DCAF4L1Q3SXM0 396 aa8.65□□□□□ -1.02
NCSTN-209ENST00000459963 ARMCX5Q6P1M9 558 aa8.65□□□□□ -1.02
NCSTN-209ENST00000459963 RHBDF2Q6PJF5 856 aa8.65□□□□□ -1.02
NCSTN-209ENST00000459963 ALKAL1Q6UXT8 129 aa8.65□□□□□ -1.02
NCSTN-209ENST00000459963 TMTC3Q6ZXV5 915 aa8.65□□□□□ -1.02
NCSTN-209ENST00000459963 CLEC14AQ86T13 490 aa8.65□□□□□ -1.02
NCSTN-209ENST00000459963 ZNF713Q8N859 430 aaPredicted RBP8.65□□□□□ -1.02
NCSTN-209ENST00000459963 ARL14EPQ8N8R7 260 aaPredicted RBP8.65□□□□□ -1.02
NCSTN-209ENST00000459963 TERB1Q8NA31 727 aa8.65□□□□□ -1.02
NCSTN-209ENST00000459963 EXOC6Q8TAG9 804 aa8.65□□□□□ -1.02
NCSTN-209ENST00000459963 HPS3Q969F9 1004 aa8.65□□□□□ -1.02
NCSTN-209ENST00000459963 PRR11Q96HE9 360 aaPredicted RBP8.65□□□□□ -1.02
NCSTN-209ENST00000459963 CCDC136Q96JN2 1154 aa8.65□□□□□ -1.02
NCSTN-209ENST00000459963 ZMAT2Q96NC0 199 aaKnown RBP8.65□□□□□ -1.02
NCSTN-209ENST00000459963 GCNT4Q9P109 453 aa8.65□□□□□ -1.02
NCSTN-209ENST00000459963 TUBD1Q9UJT1 453 aa8.65□□□□□ -1.02
NCSTN-209ENST00000459963 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.65□□□□□ -1.02
NCSTN-209ENST00000459963 PCDHGA8Q9Y5G5 932 aa8.65□□□□□ -1.02
NCSTN-209ENST00000459963 KNL1Q8NG31 2342 aa8.65□□□□□ -1.03
NCSTN-209ENST00000459963 LEFTY2O00292 366 aa8.64□□□□□ -1.03
NCSTN-209ENST00000459963 VILLO15195 856 aa8.64□□□□□ -1.03
NCSTN-209ENST00000459963 OPA1O60313 960 aa8.64□□□□□ -1.03
NCSTN-209ENST00000459963 RTN2O75298 545 aa8.64□□□□□ -1.03
NCSTN-209ENST00000459963 VPS4BO75351 444 aa8.64□□□□□ -1.03
NCSTN-209ENST00000459963 IGLV3-19P01714 112 aa8.64□□□□□ -1.03
NCSTN-209ENST00000459963 PRKCGP05129 697 aa8.64□□□□□ -1.03
NCSTN-209ENST00000459963 GNLYP22749 145 aa8.64□□□□□ -1.03
NCSTN-209ENST00000459963 HSPA4P34932 840 aa8.64□□□□□ -1.03
NCSTN-209ENST00000459963 CYP4F2P78329 520 aa8.64□□□□□ -1.03
NCSTN-209ENST00000459963 ZXDBP98169 803 aa8.64□□□□□ -1.03
NCSTN-209ENST00000459963 ATP2C1P98194 919 aaPredicted RBP8.64□□□□□ -1.03
NCSTN-209ENST00000459963 NNTQ13423 1086 aa8.64□□□□□ -1.03
NCSTN-209ENST00000459963 ARID5BQ14865 1188 aa8.64□□□□□ -1.03
NCSTN-209ENST00000459963 NOLC1Q14978 699 aaKnown RBP eCLIP8.64□□□□□ -1.03
NCSTN-209ENST00000459963 SLC39A12Q504Y0 691 aa8.64□□□□□ -1.03
NCSTN-209ENST00000459963 XKR9Q5GH70 373 aa8.64□□□□□ -1.03
NCSTN-209ENST00000459963 SFMBT2Q5VUG0 894 aa8.64□□□□□ -1.03
NCSTN-209ENST00000459963 EEF1DP3Q658K8 133 aa8.64□□□□□ -1.03
NCSTN-209ENST00000459963 OVOS1Q6IE37 1185 aa8.64□□□□□ -1.03
NCSTN-209ENST00000459963 OTUD6AQ7L8S5 288 aa8.64□□□□□ -1.03
NCSTN-209ENST00000459963 BPHLQ86WA6 291 aaPredicted RBP8.64□□□□□ -1.03
NCSTN-209ENST00000459963 ETFBKMTQ8IXQ9 262 aa8.64□□□□□ -1.03
NCSTN-209ENST00000459963 SLC34A3Q8N130 599 aa8.64□□□□□ -1.03
NCSTN-209ENST00000459963 ARL14Q8N4G2 192 aa8.64□□□□□ -1.03
NCSTN-209ENST00000459963 KIAA1958Q8N8K9 716 aa8.64□□□□□ -1.03
NCSTN-209ENST00000459963 ZSCAN1Q8NBB4 408 aa8.64□□□□□ -1.03
NCSTN-209ENST00000459963 C18orf25Q96B23 403 aaPredicted RBP8.64□□□□□ -1.03
NCSTN-209ENST00000459963 ACE2Q9BYF1 805 aaPredicted RBP8.64□□□□□ -1.03
NCSTN-209ENST00000459963 MKRN2Q9H000 416 aaKnown RBP8.64□□□□□ -1.03
NCSTN-209ENST00000459963 C6orf106Q9H6K1 298 aaPredicted RBP8.64□□□□□ -1.03
NCSTN-209ENST00000459963 TOPORSQ9NS56 1045 aaPredicted RBP8.64□□□□□ -1.03
NCSTN-209ENST00000459963 BARHL2Q9NY43 387 aa8.64□□□□□ -1.03
NCSTN-209ENST00000459963 VPS4AQ9UN37 437 aa8.64□□□□□ -1.03
NCSTN-209ENST00000459963 PCDHB6Q9Y5E3 794 aa8.64□□□□□ -1.03
NCSTN-209ENST00000459963 SPG11Q96JI7 2443 aa8.64□□□□□ -1.03
NCSTN-209ENST00000459963 ZFC3H1O60293 1989 aaKnown RBP8.64□□□□□ -1.03
NCSTN-209ENST00000459963 PCSK5Q92824 1860 aa8.64□□□□□ -1.03
NCSTN-209ENST00000459963 LRRIQ4A6NIV6 560 aa8.63□□□□□ -1.03
NCSTN-209ENST00000459963 SLC9A3R1O14745 358 aaPredicted RBP8.63□□□□□ -1.03
NCSTN-209ENST00000459963 ADAMTS3O15072 1205 aa8.63□□□□□ -1.03
NCSTN-209ENST00000459963 NOBOXO60393 691 aa8.63□□□□□ -1.03
NCSTN-209ENST00000459963 SYNCRIPO60506 623 aaKnown RBP8.63□□□□□ -1.03
NCSTN-209ENST00000459963 TULP3O75386 442 aa8.63□□□□□ -1.03
NCSTN-209ENST00000459963 CSH1P0DML2 217 aa8.63□□□□□ -1.03
NCSTN-209ENST00000459963 CSH2P0DML3 217 aa8.63□□□□□ -1.03
NCSTN-209ENST00000459963 HAPLN1P10915 354 aaPredicted RBP8.63□□□□□ -1.03
NCSTN-209ENST00000459963 KCNE1P15382 129 aa8.63□□□□□ -1.03
NCSTN-209ENST00000459963 HDCP19113 662 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms