RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 GRAP2O75791 330 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 STK10O94804 968 aaKnown RBP6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 FGGP02679 453 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 ITGB1P05556 798 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 UQCRHP07919 91 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 USP17L7P0C7H9 530 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 CYP2F1P24903 491 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 DNAJB2P25686 324 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 BMPR1AP36894 532 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 PTPN9P43378 593 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 GATMP50440 423 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 YWHAGP61981 247 aaKnown RBP eCLIP6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 RPL7AP62424 266 aaKnown RBP6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 DSG1Q02413 1049 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 ITIH3Q06033 890 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 PTP4A2Q12974 167 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 GPS2Q13227 327 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 NME3Q13232 169 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 GPNMBQ14956 572 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 PPP1R7Q15435 360 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 PTPROQ16827 1216 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 SLC25A52Q3SY17 297 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 C2CD6Q53TS8 623 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 TFDP3Q5H9I0 405 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 TMEM240Q5SV17 173 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 LRRC31Q6UY01 552 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 CEP128Q6ZU80 1094 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 RTL10Q7L3V2 364 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 STRADAQ7RTN6 431 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 SLFN11Q7Z7L1 901 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 OSTM1Q86WC4 334 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 TTC30AQ86WT1 665 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 PALB2Q86YC2 1186 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 PSTKQ8IV42 348 aaKnown RBP6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 IFT20Q8IY31 132 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 CCDC105Q8IYK2 499 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 SLC39A11Q8N1S5 342 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 SCML4Q8N228 414 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 WDTC1Q8N5D0 677 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 GPR161Q8N6U8 529 aaKnown RBP6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 MYRIPQ8NFW9 859 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 SLC7A14Q8TBB6 771 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 CCHCR1Q8TD31 782 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 ACTRT1Q8TDG2 376 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 FAM172AQ8WUF8 416 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 HSPH1Q92598 858 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 SPATA17Q96L03 361 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 CCDC114Q96M63 670 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 SERPINB11Q96P15 392 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 PGLYRP2Q96PD5 576 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 TGS1Q96RS0 853 aaKnown RBP6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 KCNK16Q96T55 309 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 DDX50Q9BQ39 737 aaKnown RBP6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 HERC2P3Q9BVR0 1158 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 TLR10Q9BXR5 811 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 FRMD8P1Q9BZ68 369 aaPredicted RBP6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 ACBD3Q9H3P7 528 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 CWH43Q9H720 699 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 CSNK1G1Q9HCP0 422 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 CRTAC1Q9NQ79 661 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 TRPM5Q9NZQ8 1165 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 COX16Q9P0S2 106 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 FNIP2Q9P278 1114 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 MTRRQ9UBK8 725 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 PCSK1NQ9UHG2 260 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 PACSIN2Q9UNF0 486 aaPredicted RBP6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 ASB3Q9Y575 518 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 MRPL42Q9Y6G3 142 aaKnown RBP6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 PATJQ8NI35 1801 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 PTPRDP23468 1912 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 H3BRJ5 948 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 DYNC1I1O14576 645 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 NCK2O43639 380 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 SRGAP2O75044 1071 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 XYLBO75191 536 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 CFHP08603 1231 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 CTSAP10619 480 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 HAPLN1P10915 354 aaPredicted RBP6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 ATF2P15336 505 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 CCR1P32246 355 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 CHRNA3P32297 505 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 ATP5C1P36542 298 aaKnown RBP6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 TNNT3P45378 269 aaPredicted RBP6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 HARS2P49590 506 aaKnown RBP6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 SLC5A3P53794 718 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 CDH6P55285 790 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 HTRA4P83105 476 aaPredicted RBP6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 COG7P83436 770 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 DUSP4Q13115 394 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 CALCOCO2Q13137 446 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 MRPL58Q14197 206 aaKnown RBP6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 PKDCCQ504Y2 493 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 ARHGAP15Q53QZ3 475 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 PPP6R3Q5H9R7 873 aaPredicted RBP6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 PPM1LQ5SGD2 360 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 C10orf120Q5SQS8 335 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 BSPRYQ5W0U4 402 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 KAZNQ674X7 775 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 SLC8B1Q6J4K2 584 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 PRSS55Q6UWB4 352 aaPredicted RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms