RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 BECN2A8MW95 431 aa16.99■□□□□ 0.31
CD28-203ENST00000458610 M0QYV0 167 aa16.99■□□□□ 0.31
CD28-203ENST00000458610 LEFTY2O00292 366 aa16.99■□□□□ 0.31
CD28-203ENST00000458610 CYP26A1O43174 497 aa16.99■□□□□ 0.31
CD28-203ENST00000458610 RARGP13631 454 aa16.99■□□□□ 0.31
CD28-203ENST00000458610 BRD2P25440 801 aaKnown RBP16.99■□□□□ 0.31
CD28-203ENST00000458610 GNA15P30679 374 aa16.99■□□□□ 0.31
CD28-203ENST00000458610 ZNF165P49910 485 aa16.99■□□□□ 0.31
CD28-203ENST00000458610 TPM4P67936 248 aa16.99■□□□□ 0.31
CD28-203ENST00000458610 PKDCCQ504Y2 493 aa16.99■□□□□ 0.31
CD28-203ENST00000458610 KLHDC7AQ5VTJ3 777 aa16.99■□□□□ 0.31
CD28-203ENST00000458610 CWF19L1Q69YN2 538 aaKnown RBP16.99■□□□□ 0.31
CD28-203ENST00000458610 PM20D1Q6GTS8 502 aa16.99■□□□□ 0.31
CD28-203ENST00000458610 GJB7Q6PEY0 223 aa16.99■□□□□ 0.31
CD28-203ENST00000458610 SLC35F5Q8WV83 523 aa16.99■□□□□ 0.31
CD28-203ENST00000458610 ZNF606Q8WXB4 792 aa16.99■□□□□ 0.31
CD28-203ENST00000458610 ATP2A3Q93084 1043 aa16.99■□□□□ 0.31
CD28-203ENST00000458610 ZFYVE19Q96K21 471 aa16.99■□□□□ 0.31
CD28-203ENST00000458610 CCSER2Q9H7U1 834 aa16.99■□□□□ 0.31
CD28-203ENST00000458610 LTB4R2Q9NPC1 389 aa16.99■□□□□ 0.31
CD28-203ENST00000458610 SIX2Q9NPC8 291 aa16.99■□□□□ 0.31
CD28-203ENST00000458610 PLCB1Q9NQ66 1216 aa16.99■□□□□ 0.31
CD28-203ENST00000458610 CNGB3Q9NQW8 809 aa16.99■□□□□ 0.31
CD28-203ENST00000458610 DNMT3LQ9UJW3 386 aa16.99■□□□□ 0.31
CD28-203ENST00000458610 SH3BP1Q9Y3L3 701 aa16.99■□□□□ 0.31
CD28-203ENST00000458610 A0A1W2PQH9 124 aa16.98■□□□□ 0.31
CD28-203ENST00000458610 E2F8A0AVK6 867 aa16.98■□□□□ 0.31
CD28-203ENST00000458610 THAP12O43422 761 aa16.98■□□□□ 0.31
CD28-203ENST00000458610 NFATC1O95644 943 aa16.98■□□□□ 0.31
CD28-203ENST00000458610 ACADSBP45954 432 aa16.98■□□□□ 0.31
CD28-203ENST00000458610 COPB1P53618 953 aaKnown RBP16.98■□□□□ 0.31
CD28-203ENST00000458610 VCPP55072 806 aaKnown RBP16.98■□□□□ 0.31
CD28-203ENST00000458610 SNX16P57768 344 aa16.98■□□□□ 0.31
CD28-203ENST00000458610 KCNMA1Q12791 1236 aa16.98■□□□□ 0.31
CD28-203ENST00000458610 BTBD8Q5XKL5 378 aa16.98■□□□□ 0.31
CD28-203ENST00000458610 SCML4Q8N228 414 aa16.98■□□□□ 0.31
CD28-203ENST00000458610 AOPEPQ8N6M6 819 aa16.98■□□□□ 0.31
CD28-203ENST00000458610 TMEM105Q8N8V8 129 aa16.98■□□□□ 0.31
CD28-203ENST00000458610 PJA1Q8NG27 643 aa16.98■□□□□ 0.31
CD28-203ENST00000458610 STK32AQ8WU08 396 aa16.98■□□□□ 0.31
CD28-203ENST00000458610 GOLGA1Q92805 767 aa16.98■□□□□ 0.31
CD28-203ENST00000458610 SECISBP2LQ93073 1101 aaKnown RBP16.98■□□□□ 0.31
CD28-203ENST00000458610 OTUB2Q96DC9 234 aa16.98■□□□□ 0.31
CD28-203ENST00000458610 LSM14BQ9BX40 385 aaKnown RBP16.98■□□□□ 0.31
CD28-203ENST00000458610 EBF3Q9H4W6 596 aa16.98■□□□□ 0.31
CD28-203ENST00000458610 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.98■□□□□ 0.31
CD28-203ENST00000458610 SMPD4Q9NXE4 827 aa16.98■□□□□ 0.31
CD28-203ENST00000458610 GTSE1Q9NYZ3 720 aa16.98■□□□□ 0.31
CD28-203ENST00000458610 CFAP97Q9P2B7 532 aa16.98■□□□□ 0.31
CD28-203ENST00000458610 GREB1Q4ZG55 1949 aa16.98■□□□□ 0.31
CD28-203ENST00000458610 NUP210Q8TEM1 1887 aaPredicted RBP16.97■□□□□ 0.31
CD28-203ENST00000458610 SPECC1L-ADORA2AF8WAN1 911 aa16.97■□□□□ 0.31
CD28-203ENST00000458610 FOXN3O00409 490 aaPredicted RBP16.97■□□□□ 0.31
CD28-203ENST00000458610 PI15O43692 258 aa16.97■□□□□ 0.31
CD28-203ENST00000458610 FBXO21O94952 628 aa16.97■□□□□ 0.31
CD28-203ENST00000458610 ZNF18P17022 549 aa16.97■□□□□ 0.31
CD28-203ENST00000458610 YWHAGP61981 247 aaKnown RBP eCLIP16.97■□□□□ 0.31
CD28-203ENST00000458610 RAPGEF1Q13905 1077 aa16.97■□□□□ 0.31
CD28-203ENST00000458610 NCAPHQ15003 741 aa16.97■□□□□ 0.31
CD28-203ENST00000458610 FILIP1LQ4L180 1135 aa16.97■□□□□ 0.31
CD28-203ENST00000458610 C10orf120Q5SQS8 335 aa16.97■□□□□ 0.31
CD28-203ENST00000458610 IER5LQ5T953 404 aa16.97■□□□□ 0.31
CD28-203ENST00000458610 RSRC2Q7L4I2 434 aaKnown RBP16.97■□□□□ 0.31
CD28-203ENST00000458610 IRGQQ8WZA9 623 aa16.97■□□□□ 0.31
CD28-203ENST00000458610 PCMTD1Q96MG8 357 aaPredicted RBP16.97■□□□□ 0.31
CD28-203ENST00000458610 STK33Q9BYT3 514 aa16.97■□□□□ 0.31
CD28-203ENST00000458610 NMUR1Q9HB89 426 aa16.97■□□□□ 0.31
CD28-203ENST00000458610 OLA1Q9NTK5 396 aaKnown RBP16.97■□□□□ 0.31
CD28-203ENST00000458610 LSM7Q9UK45 103 aaKnown RBP16.97■□□□□ 0.31
CD28-203ENST00000458610 STRIP2Q9ULQ0 834 aa16.97■□□□□ 0.31
CD28-203ENST00000458610 SYCE3A1L190 88 aa16.96■□□□□ 0.31
CD28-203ENST00000458610 LGALS16A8MUM7 142 aa16.96■□□□□ 0.31
CD28-203ENST00000458610 SART1O43290 800 aaKnown RBP16.96■□□□□ 0.31
CD28-203ENST00000458610 LCP1P13796 627 aa16.96■□□□□ 0.31
CD28-203ENST00000458610 UCHL3P15374 230 aa16.96■□□□□ 0.31
CD28-203ENST00000458610 CTHP32929 405 aa16.96■□□□□ 0.31
CD28-203ENST00000458610 KRT9P35527 623 aa16.96■□□□□ 0.31
CD28-203ENST00000458610 COG7P83436 770 aa16.96■□□□□ 0.31
CD28-203ENST00000458610 UBXN1Q04323 297 aa16.96■□□□□ 0.31
CD28-203ENST00000458610 TNK2Q07912 1038 aa16.96■□□□□ 0.31
CD28-203ENST00000458610 ADIGQ0VDE8 80 aa16.96■□□□□ 0.31
CD28-203ENST00000458610 LRRC32Q14392 662 aa16.96■□□□□ 0.31
CD28-203ENST00000458610 DRAP1Q14919 205 aaPredicted RBP16.96■□□□□ 0.31
CD28-203ENST00000458610 SCD5Q86SK9 330 aa16.96■□□□□ 0.31
CD28-203ENST00000458610 CCDC105Q8IYK2 499 aa16.96■□□□□ 0.31
CD28-203ENST00000458610 FAM71AQ8IYT1 594 aa16.96■□□□□ 0.31
CD28-203ENST00000458610 DTWD2Q8NBA8 298 aa16.96■□□□□ 0.31
CD28-203ENST00000458610 RNF139Q8WU17 664 aa16.96■□□□□ 0.31
CD28-203ENST00000458610 NOX5Q96PH1 765 aa16.96■□□□□ 0.31
CD28-203ENST00000458610 ZSWIM1Q9BR11 485 aa16.96■□□□□ 0.31
CD28-203ENST00000458610 IER2Q9BTL4 223 aa16.96■□□□□ 0.31
CD28-203ENST00000458610 ULBP1Q9BZM6 244 aa16.96■□□□□ 0.31
CD28-203ENST00000458610 FOXQ1Q9C009 403 aa16.96■□□□□ 0.31
CD28-203ENST00000458610 ECT2Q9H8V3 914 aa16.96■□□□□ 0.31
CD28-203ENST00000458610 ABCC13Q9NSE7 274 aa16.96■□□□□ 0.31
CD28-203ENST00000458610 CEP83Q9Y592 693 aa16.96■□□□□ 0.31
CD28-203ENST00000458610 WNT6Q9Y6F9 365 aa16.96■□□□□ 0.31
CD28-203ENST00000458610 DENND4CQ5VZ89 1909 aa16.96■□□□□ 0.3
CD28-203ENST00000458610 TULP2O00295 520 aa16.95■□□□□ 0.3
CD28-203ENST00000458610 GALR2O43603 387 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms