RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 ZSCAN31Q96LW9 406 aaPredicted RBP5.75□□□□□ -1.49
VPS41-209ENST00000457055 TMEM237Q96Q45 408 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 CTAGE1Q96RT6 745 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 DHRS4Q9BTZ2 278 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 SSBP3Q9BWW4 388 aaPredicted RBP5.75□□□□□ -1.49
VPS41-209ENST00000457055 B3GNT4Q9C0J1 378 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 SLC12A5Q9H2X9 1139 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 PSTPIP2Q9H939 334 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 RSAD1Q9HA92 442 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 HPS4Q9NQG7 708 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 FBXL7Q9UJT9 491 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 DENND2AQ9ULE3 1009 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 CHTOPQ9Y3Y2 248 aaKnown RBP5.75□□□□□ -1.49
VPS41-209ENST00000457055 RALGAPBQ86X10 1494 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 UNC13BO14795 1591 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 MROH5Q6ZUA9 1318 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 MROH1Q8NDA8 1641 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 GOLGA6L10A6NI86 522 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 A6NLC8 198 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 C16orf96A6NNT2 1141 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 DDX39AO00148 427 aaKnown RBP5.74□□□□□ -1.49
VPS41-209ENST00000457055 ZEB2O60315 1214 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 B4GALT3O60512 393 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 URI1O94763 535 aaPredicted RBP5.74□□□□□ -1.49
VPS41-209ENST00000457055 ZFYP08048 801 aaPredicted RBP5.74□□□□□ -1.49
VPS41-209ENST00000457055 SCG2P13521 617 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 ALOX12P18054 663 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 ATP5JP18859 108 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 CDH3P22223 829 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 KELP23276 732 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 DNAJB1P25685 340 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 ACTN2P35609 894 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 HAAOP46952 286 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 VCPP55072 806 aaKnown RBP5.74□□□□□ -1.49
VPS41-209ENST00000457055 TMPRSS15P98073 1019 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 MTX1Q13505 466 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 SNX1Q13596 522 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 SURF1Q15526 300 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 ABCB5Q2M3G0 1257 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 LETM2Q2VYF4 491 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 SV2CQ496J9 727 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 KCNT1Q5JUK3 1230 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 ZNF362Q5T0B9 420 aaPredicted RBP5.74□□□□□ -1.49
VPS41-209ENST00000457055 THOC7Q6I9Y2 204 aaKnown RBP5.74□□□□□ -1.49
VPS41-209ENST00000457055 C6orf15Q6UXA7 325 aaPredicted RBP5.74□□□□□ -1.49
VPS41-209ENST00000457055 ZNF227Q86WZ6 799 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 KRT73Q86Y46 540 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 ITPRIPQ8IWB1 547 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 XXYLT1Q8NBI6 393 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 OR8K3Q8NH51 312 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 CEP70Q8NHQ1 597 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 AGR3Q8TD06 166 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 COG1Q8WTW3 980 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 HSPH1Q92598 858 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 PPP1R14BQ96C90 147 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 SDCCAG3Q96C92 435 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 FAXDC2Q96IV6 333 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 MAML3Q96JK9 1138 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 HS6ST2Q96MM7 605 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 TTC25Q96NG3 672 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 WDR24Q96S15 920 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 INTS2Q9H0H0 1204 aaKnown RBP5.74□□□□□ -1.49
VPS41-209ENST00000457055 L2HGDHQ9H9P8 463 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 FANCEQ9HB96 536 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 SPON1Q9HCB6 807 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 PDE11AQ9HCR9 933 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 TBCCD1Q9NVR7 557 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 DTLQ9NZJ0 730 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 LRP2BPQ9P2M1 347 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 SRRDQ9UH36 339 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 PCDHB4Q9Y5E5 795 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.74□□□□□ -1.49
VPS41-209ENST00000457055 AATKQ6ZMQ8 1374 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 SPHKAPQ2M3C7 1700 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 KIAA1107Q9UPP5 1409 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 FLT1P17948 1338 aa5.74□□□□□ -1.49
VPS41-209ENST00000457055 ARHGAP35Q9NRY4 1499 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 MBD5Q9P267 1494 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 NSD2O96028 1365 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 ROCK1Q13464 1354 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 A0A087X0M5 115 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 IQANK1A0A1B0GTG1 560 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 A0A1B0GX30 115 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 OR6C65A6NJZ3 312 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.73□□□□□ -1.49
VPS41-209ENST00000457055 F5H0A9 414 aaPredicted RBP5.73□□□□□ -1.49
VPS41-209ENST00000457055 PSMD9O00233 223 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 ARNTLO00327 626 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 VWA5AO00534 786 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 HGSO14964 777 aaPredicted RBP5.73□□□□□ -1.49
VPS41-209ENST00000457055 CYTH3O43739 400 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 PQBP1O60828 265 aaKnown RBP5.73□□□□□ -1.49
VPS41-209ENST00000457055 POP4O95707 220 aaKnown RBP5.73□□□□□ -1.49
VPS41-209ENST00000457055 ITGAVP06756 1048 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 ATP1A3P13637 1013 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 JAK1P23458 1154 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 MSNP26038 577 aaKnown RBP5.73□□□□□ -1.49
VPS41-209ENST00000457055 EEF1GP26641 437 aaKnown RBP5.73□□□□□ -1.49
VPS41-209ENST00000457055 GDI1P31150 447 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 HOXA11P31270 313 aaPredicted RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms