RNA–Protein interactions for RNA: ENST00000454444.1

AC007879.2-201, humanhuman

TSL 4 BASIC

Gene AC007879.2, Length 551 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007879.2-201ENST00000454444 ME1P48163 572 aa8.29□□□□□ -1.08
AC007879.2-201ENST00000454444 TUBP50607 506 aa8.29□□□□□ -1.08
AC007879.2-201ENST00000454444 SLC5A3P53794 718 aa8.29□□□□□ -1.08
AC007879.2-201ENST00000454444 CDH8P55286 799 aa8.29□□□□□ -1.08
AC007879.2-201ENST00000454444 DUOXA1Q1HG43 343 aa8.29□□□□□ -1.08
AC007879.2-201ENST00000454444 SGSM1Q2NKQ1 1148 aa8.29□□□□□ -1.08
AC007879.2-201ENST00000454444 SYCP2LQ5T4T6 812 aa8.29□□□□□ -1.08
AC007879.2-201ENST00000454444 FOXD4L5Q5VV16 416 aaPredicted RBP8.29□□□□□ -1.08
AC007879.2-201ENST00000454444 GRAMD4Q6IC98 578 aa8.29□□□□□ -1.08
AC007879.2-201ENST00000454444 UNQ6494/PRO21346Q6UXR6 183 aa8.29□□□□□ -1.08
AC007879.2-201ENST00000454444 SCARA5Q6ZMJ2 495 aa8.29□□□□□ -1.08
AC007879.2-201ENST00000454444 EPM2AIP1Q7L775 607 aaPredicted RBP8.29□□□□□ -1.08
AC007879.2-201ENST00000454444 TADA2BQ86TJ2 420 aa8.29□□□□□ -1.08
AC007879.2-201ENST00000454444 ACOT1Q86TX2 421 aa8.29□□□□□ -1.08
AC007879.2-201ENST00000454444 FAM35AQ86V20 835 aa8.29□□□□□ -1.08
AC007879.2-201ENST00000454444 RGL4Q8IZJ4 473 aa8.29□□□□□ -1.08
AC007879.2-201ENST00000454444 DEFB119Q8N690 84 aa8.29□□□□□ -1.08
AC007879.2-201ENST00000454444 CCDC150Q8NCX0 1101 aa8.29□□□□□ -1.08
AC007879.2-201ENST00000454444 SCAMP5Q8TAC9 235 aa8.29□□□□□ -1.08
AC007879.2-201ENST00000454444 OLIG1Q8TAK6 271 aa8.29□□□□□ -1.08
AC007879.2-201ENST00000454444 FOXD4L4Q8WXT5 416 aaPredicted RBP8.29□□□□□ -1.08
AC007879.2-201ENST00000454444 BBS2Q9BXC9 721 aa8.29□□□□□ -1.08
AC007879.2-201ENST00000454444 BLZF1Q9H2G9 400 aa8.29□□□□□ -1.08
AC007879.2-201ENST00000454444 SMYD3Q9H7B4 428 aa8.29□□□□□ -1.08
AC007879.2-201ENST00000454444 ZDHHC4Q9NPG8 344 aa8.29□□□□□ -1.08
AC007879.2-201ENST00000454444 SPHK2Q9NRA0 654 aa8.29□□□□□ -1.08
AC007879.2-201ENST00000454444 EXOC1Q9NV70 894 aa8.29□□□□□ -1.08
AC007879.2-201ENST00000454444 DNAJC17Q9NVM6 304 aaKnown RBP8.29□□□□□ -1.08
AC007879.2-201ENST00000454444 GMIPQ9P107 970 aa8.29□□□□□ -1.08
AC007879.2-201ENST00000454444 WDR35Q9P2L0 1181 aa8.29□□□□□ -1.08
AC007879.2-201ENST00000454444 SLC6A14Q9UN76 642 aa8.29□□□□□ -1.08
AC007879.2-201ENST00000454444 FRMD4BQ9Y2L6 1034 aa8.29□□□□□ -1.08
AC007879.2-201ENST00000454444 PCDHB9Q9Y5E1 797 aa8.29□□□□□ -1.08
AC007879.2-201ENST00000454444 TMEM8BA6NDV4 472 aa8.28□□□□□ -1.08
AC007879.2-201ENST00000454444 C1QTNF9BB2RNN3 333 aa8.28□□□□□ -1.08
AC007879.2-201ENST00000454444 NEDD8-MDP1E9PL57 170 aa8.28□□□□□ -1.08
AC007879.2-201ENST00000454444 K7ELQ4 463 aaPredicted RBP8.28□□□□□ -1.08
AC007879.2-201ENST00000454444 CDX4O14627 284 aaPredicted RBP8.28□□□□□ -1.08
AC007879.2-201ENST00000454444 HOXC11O43248 304 aaPredicted RBP8.28□□□□□ -1.08
AC007879.2-201ENST00000454444 TLR5O60602 858 aa8.28□□□□□ -1.08
AC007879.2-201ENST00000454444 KIF20AO95235 890 aa8.28□□□□□ -1.08
AC007879.2-201ENST00000454444 RPN1P04843 607 aaKnown RBP8.28□□□□□ -1.08
AC007879.2-201ENST00000454444 C1QTNF9P0C862 333 aa8.28□□□□□ -1.08
AC007879.2-201ENST00000454444 FAM200BP0CF97 657 aa8.28□□□□□ -1.08
AC007879.2-201ENST00000454444 GNSP15586 552 aa8.28□□□□□ -1.08
AC007879.2-201ENST00000454444 HOXD13P35453 343 aa8.28□□□□□ -1.08
AC007879.2-201ENST00000454444 WASP42768 502 aa8.28□□□□□ -1.08
AC007879.2-201ENST00000454444 KIR2DL1P43626 348 aaPredicted RBP8.28□□□□□ -1.08
AC007879.2-201ENST00000454444 CACNA2D1P54289 1103 aa8.28□□□□□ -1.08
AC007879.2-201ENST00000454444 MAP3K7CLP57077 242 aa8.28□□□□□ -1.08
AC007879.2-201ENST00000454444 SIM1P81133 766 aaPredicted RBP8.28□□□□□ -1.08
AC007879.2-201ENST00000454444 E2F5Q15329 346 aa8.28□□□□□ -1.08
AC007879.2-201ENST00000454444 E2F4Q16254 413 aa8.28□□□□□ -1.08
AC007879.2-201ENST00000454444 GAB4Q2WGN9 574 aa8.28□□□□□ -1.08
AC007879.2-201ENST00000454444 FOXD4L6Q3SYB3 417 aaPredicted RBP8.28□□□□□ -1.08
AC007879.2-201ENST00000454444 KIAA1211LQ6NV74 962 aa8.28□□□□□ -1.08
AC007879.2-201ENST00000454444 CNNM4Q6P4Q7 775 aa8.28□□□□□ -1.08
AC007879.2-201ENST00000454444 FOXD4L3Q6VB84 417 aaPredicted RBP8.28□□□□□ -1.08
AC007879.2-201ENST00000454444 TPGS1Q6ZTW0 290 aa8.28□□□□□ -1.08
AC007879.2-201ENST00000454444 C12orf40Q86WS4 652 aa8.28□□□□□ -1.08
AC007879.2-201ENST00000454444 TMEM25Q86YD3 366 aa8.28□□□□□ -1.08
AC007879.2-201ENST00000454444 BBS7Q8IWZ6 715 aa8.28□□□□□ -1.08
AC007879.2-201ENST00000454444 TERB1Q8NA31 727 aa8.28□□□□□ -1.08
AC007879.2-201ENST00000454444 SLC2A14Q8TDB8 520 aa8.28□□□□□ -1.08
AC007879.2-201ENST00000454444 ZNF516Q92618 1163 aa8.28□□□□□ -1.08
AC007879.2-201ENST00000454444 CCDC47Q96A33 483 aaKnown RBP8.28□□□□□ -1.08
AC007879.2-201ENST00000454444 JAKMIP2Q96AA8 810 aa8.28□□□□□ -1.08
AC007879.2-201ENST00000454444 SCNM1Q9BWG6 230 aa8.28□□□□□ -1.08
AC007879.2-201ENST00000454444 ADAM33Q9BZ11 813 aa8.28□□□□□ -1.08
AC007879.2-201ENST00000454444 CCSER2Q9H7U1 834 aa8.28□□□□□ -1.08
AC007879.2-201ENST00000454444 CFAP45Q9UL16 551 aa8.28□□□□□ -1.08
AC007879.2-201ENST00000454444 ZMIZ1Q9ULJ6 1067 aa8.28□□□□□ -1.08
AC007879.2-201ENST00000454444 TCHHQ07283 1943 aa8.28□□□□□ -1.08
AC007879.2-201ENST00000454444 TSC2P49815 1807 aa8.28□□□□□ -1.08
AC007879.2-201ENST00000454444 ATG2BQ96BY7 2078 aa8.28□□□□□ -1.08
AC007879.2-201ENST00000454444 ATXN2Q99700 1313 aaKnown RBP8.28□□□□□ -1.08
AC007879.2-201ENST00000454444 H0Y626 953 aa8.27□□□□□ -1.09
AC007879.2-201ENST00000454444 CALUO43852 315 aaPredicted RBP8.27□□□□□ -1.09
AC007879.2-201ENST00000454444 ADAM23O75077 832 aa8.27□□□□□ -1.09
AC007879.2-201ENST00000454444 TRIM16O95361 564 aa8.27□□□□□ -1.09
AC007879.2-201ENST00000454444 SERPINF2P08697 491 aa8.27□□□□□ -1.09
AC007879.2-201ENST00000454444 RALAP11233 206 aa8.27□□□□□ -1.09
AC007879.2-201ENST00000454444 CCDC130P13994 396 aa8.27□□□□□ -1.09
AC007879.2-201ENST00000454444 TYRP14679 529 aa8.27□□□□□ -1.09
AC007879.2-201ENST00000454444 HNRNPLP14866 589 aaKnown RBP eCLIP8.27□□□□□ -1.09
AC007879.2-201ENST00000454444 SPINK2P20155 84 aa8.27□□□□□ -1.09
AC007879.2-201ENST00000454444 ITPKAP23677 461 aa8.27□□□□□ -1.09
AC007879.2-201ENST00000454444 ADORA2BP29275 332 aa8.27□□□□□ -1.09
AC007879.2-201ENST00000454444 PIK3CAP42336 1068 aa8.27□□□□□ -1.09
AC007879.2-201ENST00000454444 PLA2G4AP47712 749 aa8.27□□□□□ -1.09
AC007879.2-201ENST00000454444 CASP4P49662 377 aa8.27□□□□□ -1.09
AC007879.2-201ENST00000454444 ZNF33AQ06730 810 aa8.27□□□□□ -1.09
AC007879.2-201ENST00000454444 HNRNPDQ14103 355 aaKnown RBP8.27□□□□□ -1.09
AC007879.2-201ENST00000454444 STARD3Q14849 445 aa8.27□□□□□ -1.09
AC007879.2-201ENST00000454444 BMT2Q1RMZ1 405 aa8.27□□□□□ -1.09
AC007879.2-201ENST00000454444 MAP7D1Q3KQU3 841 aa8.27□□□□□ -1.09
AC007879.2-201ENST00000454444 WDR45BQ5MNZ6 344 aa8.27□□□□□ -1.09
AC007879.2-201ENST00000454444 C10orf120Q5SQS8 335 aa8.27□□□□□ -1.09
AC007879.2-201ENST00000454444 SNX30Q5VWJ9 437 aa8.27□□□□□ -1.09
AC007879.2-201ENST00000454444 CEP135Q66GS9 1140 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms