RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 DNASE2BQ8WZ79 361 aa5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 EXTL1Q92935 676 aa5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 EAF1Q96JC9 268 aaPredicted RBP5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 CDHR1Q96JP9 859 aa5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 TBC1D32Q96NH3 1257 aa5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 POLR3CQ9BUI4 534 aaPredicted RBP5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 WNT10AQ9GZT5 417 aa5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 BOLA2Q9H3K6 86 aa5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 ASCL3Q9NQ33 180 aa5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 MTRRQ9UBK8 725 aa5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 DKK3Q9UBP4 350 aa5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 SLC9A2Q9UBY0 812 aa5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 ANAPC4Q9UJX5 808 aa5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 ADAM30Q9UKF2 790 aa5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 MMP17Q9ULZ9 603 aa5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 ACTL7BQ9Y614 415 aa5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 TLN2Q9Y4G6 2542 aa5.85□□□□□ -1.47
SBDSP1-204ENST00000453858 SF3B1O75533 1304 aaKnown RBP eCLIP5.84□□□□□ -1.479e-6■■■■■ 68.9
SBDSP1-204ENST00000453858 M0R2C6 588 aa5.84□□□□□ -1.47
SBDSP1-204ENST00000453858 MAFGO15525 162 aa5.84□□□□□ -1.47
SBDSP1-204ENST00000453858 SEMA7AO75326 666 aa5.84□□□□□ -1.47
SBDSP1-204ENST00000453858 TADA2AO75478 443 aa5.84□□□□□ -1.47
SBDSP1-204ENST00000453858 ATE1O95260 518 aa5.84□□□□□ -1.47
SBDSP1-204ENST00000453858 PRAMEF12O95522 483 aa5.84□□□□□ -1.47
SBDSP1-204ENST00000453858 CCNE2O96020 404 aa5.84□□□□□ -1.47
SBDSP1-204ENST00000453858 H2AFB1P0C5Y9 115 aa5.84□□□□□ -1.47
SBDSP1-204ENST00000453858 H2AFB2P0C5Z0 115 aa5.84□□□□□ -1.47
SBDSP1-204ENST00000453858 ATP5JP18859 108 aa5.84□□□□□ -1.47
SBDSP1-204ENST00000453858 ITGB7P26010 798 aa5.84□□□□□ -1.47
SBDSP1-204ENST00000453858 GJA4P35212 333 aa5.84□□□□□ -1.47
SBDSP1-204ENST00000453858 SREBF1P36956 1147 aa5.84□□□□□ -1.47
SBDSP1-204ENST00000453858 CDR1P51861 262 aa5.84□□□□□ -1.47
SBDSP1-204ENST00000453858 DRP2Q13474 957 aa5.84□□□□□ -1.47
SBDSP1-204ENST00000453858 BYSLQ13895 437 aaKnown RBP5.84□□□□□ -1.47
SBDSP1-204ENST00000453858 ZBTB37Q5TC79 503 aa5.84□□□□□ -1.47
SBDSP1-204ENST00000453858 KANSL1Q7Z3B3 1105 aa5.84□□□□□ -1.47
SBDSP1-204ENST00000453858 C12orf40Q86WS4 652 aa5.84□□□□□ -1.47
SBDSP1-204ENST00000453858 PTRH1Q86Y79 214 aaKnown RBP5.84□□□□□ -1.47
SBDSP1-204ENST00000453858 FAM20CQ8IXL6 584 aa5.84□□□□□ -1.47
SBDSP1-204ENST00000453858 SMYD4Q8IYR2 804 aaPredicted RBP5.84□□□□□ -1.47
SBDSP1-204ENST00000453858 LRRC71Q8N4P6 559 aa5.84□□□□□ -1.47
SBDSP1-204ENST00000453858 GIMAP7Q8NHV1 300 aa5.84□□□□□ -1.47
SBDSP1-204ENST00000453858 MOCOSQ96EN8 888 aa5.84□□□□□ -1.47
SBDSP1-204ENST00000453858 LRRCC1Q9C099 1032 aa5.84□□□□□ -1.47
SBDSP1-204ENST00000453858 ACBD3Q9H3P7 528 aa5.84□□□□□ -1.47
SBDSP1-204ENST00000453858 EBF3Q9H4W6 596 aa5.84□□□□□ -1.47
SBDSP1-204ENST00000453858 ACSS3Q9H6R3 686 aa5.84□□□□□ -1.47
SBDSP1-204ENST00000453858 GEMIN8Q9NWZ8 242 aaKnown RBP5.84□□□□□ -1.47
SBDSP1-204ENST00000453858 CACNG4Q9UBN1 327 aa5.84□□□□□ -1.47
SBDSP1-204ENST00000453858 STRIP2Q9ULQ0 834 aa5.84□□□□□ -1.47
SBDSP1-204ENST00000453858 PIN4Q9Y237 131 aaKnown RBP5.84□□□□□ -1.47
SBDSP1-204ENST00000453858 AKT3Q9Y243 479 aa5.84□□□□□ -1.47
SBDSP1-204ENST00000453858 BACE2Q9Y5Z0 518 aa5.84□□□□□ -1.47
SBDSP1-204ENST00000453858 CDY1Q9Y6F8 540 aa5.84□□□□□ -1.47
SBDSP1-204ENST00000453858 LRRK1Q38SD2 2015 aa5.84□□□□□ -1.48
SBDSP1-204ENST00000453858 MYH6P13533 1939 aa5.84□□□□□ -1.48
SBDSP1-204ENST00000453858 MYO18AQ92614 2054 aaKnown RBP5.83□□□□□ -1.48
SBDSP1-204ENST00000453858 IGHV1OR15-9A0A0B4J2B8 117 aa5.83□□□□□ -1.48
SBDSP1-204ENST00000453858 MEIS2O14770 477 aa5.83□□□□□ -1.48
SBDSP1-204ENST00000453858 MAGEB2O15479 319 aa5.83□□□□□ -1.48
SBDSP1-204ENST00000453858 PCDHGA12O60330 932 aa5.83□□□□□ -1.48
SBDSP1-204ENST00000453858 AGFG2O95081 481 aa5.83□□□□□ -1.48
SBDSP1-204ENST00000453858 LUC7L3O95232 432 aaKnown RBP5.83□□□□□ -1.48
SBDSP1-204ENST00000453858 APPP05067 770 aa5.83□□□□□ -1.48
SBDSP1-204ENST00000453858 ATF2P15336 505 aa5.83□□□□□ -1.48
SBDSP1-204ENST00000453858 MAP4P27816 1152 aaKnown RBP5.83□□□□□ -1.48
SBDSP1-204ENST00000453858 MATKP42679 507 aa5.83□□□□□ -1.48
SBDSP1-204ENST00000453858 GRK6P43250 576 aa5.83□□□□□ -1.48
SBDSP1-204ENST00000453858 SCNN1GP51170 649 aa5.83□□□□□ -1.48
SBDSP1-204ENST00000453858 ITGB3BPQ13352 177 aaPredicted RBP5.83□□□□□ -1.48
SBDSP1-204ENST00000453858 TRIM68Q6AZZ1 485 aa5.83□□□□□ -1.48
SBDSP1-204ENST00000453858 SLC8B1Q6J4K2 584 aa5.83□□□□□ -1.48
SBDSP1-204ENST00000453858 ZSCAN25Q6NSZ9 544 aa5.83□□□□□ -1.48
SBDSP1-204ENST00000453858 PAOXQ6QHF9 649 aa5.83□□□□□ -1.48
SBDSP1-204ENST00000453858 CD300LGQ6UXG3 332 aa5.83□□□□□ -1.48
SBDSP1-204ENST00000453858 SLC36A4Q6YBV0 504 aa5.83□□□□□ -1.48
SBDSP1-204ENST00000453858 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.83□□□□□ -1.48
SBDSP1-204ENST00000453858 CCDC81Q6ZN84 652 aa5.83□□□□□ -1.48
SBDSP1-204ENST00000453858 HID1Q8IV36 788 aa5.83□□□□□ -1.48
SBDSP1-204ENST00000453858 CCDC60Q8IWA6 550 aaPredicted RBP5.83□□□□□ -1.48
SBDSP1-204ENST00000453858 ARMC10Q8N2F6 343 aa5.83□□□□□ -1.48
SBDSP1-204ENST00000453858 CCDC33Q8N5R6 958 aa5.83□□□□□ -1.48
SBDSP1-204ENST00000453858 LEMD2Q8NC56 503 aa5.83□□□□□ -1.48
SBDSP1-204ENST00000453858 SPATA3Q8NHX4 192 aa5.83□□□□□ -1.48
SBDSP1-204ENST00000453858 RIN3Q8TB24 985 aa5.83□□□□□ -1.48
SBDSP1-204ENST00000453858 BPIFB1Q8TDL5 484 aa5.83□□□□□ -1.48
SBDSP1-204ENST00000453858 PIGOQ8TEQ8 1089 aa5.83□□□□□ -1.48
SBDSP1-204ENST00000453858 APPBP2Q92624 585 aa5.83□□□□□ -1.48
SBDSP1-204ENST00000453858 TP53INP1Q96A56 240 aa5.83□□□□□ -1.48
SBDSP1-204ENST00000453858 HSPA12BQ96MM6 686 aa5.83□□□□□ -1.48
SBDSP1-204ENST00000453858 API5Q9BZZ5 524 aaKnown RBP5.83□□□□□ -1.48
SBDSP1-204ENST00000453858 SSU72Q9NP77 194 aaKnown RBP5.83□□□□□ -1.48
SBDSP1-204ENST00000453858 UBN1Q9NPG3 1134 aa5.83□□□□□ -1.48
SBDSP1-204ENST00000453858 DONSONQ9NYP3 566 aa5.83□□□□□ -1.48
SBDSP1-204ENST00000453858 UBP1Q9NZI7 540 aa5.83□□□□□ -1.48
SBDSP1-204ENST00000453858 TPCN1Q9ULQ1 816 aa5.83□□□□□ -1.48
SBDSP1-204ENST00000453858 INSL5Q9Y5Q6 135 aa5.83□□□□□ -1.48
SBDSP1-204ENST00000453858 ESPL1Q14674 2120 aa5.83□□□□□ -1.48
SBDSP1-204ENST00000453858 NFASCO94856 1347 aa5.82□□□□□ -1.48
SBDSP1-204ENST00000453858 A0A1B0GTW7 788 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms