RNA–Protein interactions for RNA: ENST00000453022.6

DEPDC1B-202, Transcript of DEP domain containing 1B, humanhuman

TSL 2 BASIC

Gene DEPDC1B, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-202ENST00000453022 CEACAM1P13688 526 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 CSRP1P21291 193 aaKnown RBP9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 YWHAQP27348 245 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 GRIA2P42262 883 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 TNFRSF4P43489 277 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 PGFP49763 221 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 SLC5A3P53794 718 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 BMT2Q1RMZ1 405 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 HSF5Q4G112 596 aaPredicted RBP9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 TRIM61Q5EBN2 209 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 EOGTQ5NDL2 527 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 SNX30Q5VWJ9 437 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 LPCAT2Q7L5N7 544 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 BBS7Q8IWZ6 715 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 C12orf56Q8IXR9 622 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 NAT16Q8N8M0 369 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 PDZD8Q8NEN9 1154 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 HMGB4Q8WW32 186 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 OVCA2Q8WZ82 227 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 SPACA7Q96KW9 195 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 C7orf25Q9BPX7 421 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 LRRC27Q9C0I9 530 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 VRTNQ9H8Y1 702 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 POLMQ9NP87 494 aaPredicted RBP9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 IL37Q9NZH6 218 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 GMIPQ9P107 970 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 TBC1D14Q9P2M4 693 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 TFIP11Q9UBB9 837 aaKnown RBP9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 CACNA1EQ15878 2313 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 PKD1L2Q7Z442 2459 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 FAM92AA1XBS5 289 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 TRIM24O15164 1050 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 HOXC11O43248 304 aaPredicted RBP9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 GREM1O60565 184 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 TULP3O75386 442 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 GABRG2P18507 467 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 ATICP31939 592 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 TUBP50607 506 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 GAD2Q05329 585 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 TRPC3Q13507 836 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 UAP1L1Q3KQV9 507 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 HECTD3Q5T447 861 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 PEAR1Q5VY43 1037 aaPredicted RBP9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 SCARA5Q6ZMJ2 495 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 UNC13DQ70J99 1090 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 MIB1Q86YT6 1006 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 SYT12Q8IV01 421 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 FUKQ8N0W3 1084 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 SPRYD3Q8NCJ5 442 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 DEFB124Q8NES8 71 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 ZMIZ2Q8NF64 920 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 SYAP1Q96A49 352 aaPredicted RBP9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 OTUB2Q96DC9 234 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 DUSP9Q99956 384 aaKnown RBP9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 ADAM33Q9BZ11 813 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 BLZF1Q9H2G9 400 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 DMAP1Q9NPF5 467 aaPredicted RBP9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 FSCN3Q9NQT6 498 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 KRT82Q9NSB4 513 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 BCCIPQ9P287 314 aaKnown RBP eCLIP9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 HMGXB4Q9UGU5 601 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 CHORDC1Q9UHD1 332 aaPredicted RBP9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 ZFYVE26Q68DK2 2539 aa9.36□□□□□ -0.91
DEPDC1B-202ENST00000453022 LRRIQ3A6PVS8 624 aaPredicted RBP9.36□□□□□ -0.91
DEPDC1B-202ENST00000453022 CUTAO60888 179 aa9.36□□□□□ -0.91
DEPDC1B-202ENST00000453022 BEST1O76090 585 aa9.36□□□□□ -0.91
DEPDC1B-202ENST00000453022 VNN1O95497 513 aa9.36□□□□□ -0.91
DEPDC1B-202ENST00000453022 YEATS4O95619 227 aa9.36□□□□□ -0.91
DEPDC1B-202ENST00000453022 IRF1P10914 325 aa9.36□□□□□ -0.91
DEPDC1B-202ENST00000453022 CCDC130P13994 396 aa9.36□□□□□ -0.91
DEPDC1B-202ENST00000453022 ENGP17813 658 aa9.36□□□□□ -0.91
DEPDC1B-202ENST00000453022 ITPKAP23677 461 aa9.36□□□□□ -0.91
DEPDC1B-202ENST00000453022 MAPK8P45983 427 aa9.36□□□□□ -0.91
DEPDC1B-202ENST00000453022 SNRPFP62306 86 aaKnown RBP9.36□□□□□ -0.91
DEPDC1B-202ENST00000453022 CLDN10P78369 228 aa9.36□□□□□ -0.91
DEPDC1B-202ENST00000453022 AMPD3Q01432 767 aa9.36□□□□□ -0.91
DEPDC1B-202ENST00000453022 ORC1Q13415 861 aa9.36□□□□□ -0.91
DEPDC1B-202ENST00000453022 CUL4BQ13620 913 aa9.36□□□□□ -0.91
DEPDC1B-202ENST00000453022 CKAP5Q14008 2032 aa9.36□□□□□ -0.91
DEPDC1B-202ENST00000453022 ZNF699Q32M78 642 aa9.36□□□□□ -0.91
DEPDC1B-202ENST00000453022 LYSMD4Q5XG99 296 aa9.36□□□□□ -0.91
DEPDC1B-202ENST00000453022 SLC23A3Q6PIS1 610 aa9.36□□□□□ -0.91
DEPDC1B-202ENST00000453022 TMEM25Q86YD3 366 aa9.36□□□□□ -0.91
DEPDC1B-202ENST00000453022 ZNF513Q8N8E2 541 aaPredicted RBP9.36□□□□□ -0.91
DEPDC1B-202ENST00000453022 TERB1Q8NA31 727 aa9.36□□□□□ -0.91
DEPDC1B-202ENST00000453022 IQUBQ8NA54 791 aa9.36□□□□□ -0.91
DEPDC1B-202ENST00000453022 KDF1Q8NAX2 398 aaPredicted RBP9.36□□□□□ -0.91
DEPDC1B-202ENST00000453022 PARD3BQ8TEW8 1205 aa9.36□□□□□ -0.91
DEPDC1B-202ENST00000453022 GATA6Q92908 595 aa9.36□□□□□ -0.91
DEPDC1B-202ENST00000453022 SMARCD1Q96GM5 515 aa9.36□□□□□ -0.91
DEPDC1B-202ENST00000453022 SMOQ99835 787 aa9.36□□□□□ -0.91
DEPDC1B-202ENST00000453022 MED10Q9BTT4 135 aa9.36□□□□□ -0.91
DEPDC1B-202ENST00000453022 CD248Q9HCU0 757 aa9.36□□□□□ -0.91
DEPDC1B-202ENST00000453022 SLC39A2Q9NP94 309 aa9.36□□□□□ -0.91
DEPDC1B-202ENST00000453022 SPHK2Q9NRA0 654 aa9.36□□□□□ -0.91
DEPDC1B-202ENST00000453022 PILRBQ9UKJ0 227 aa9.36□□□□□ -0.91
DEPDC1B-202ENST00000453022 ZMIZ1Q9ULJ6 1067 aa9.36□□□□□ -0.91
DEPDC1B-202ENST00000453022 SH3BP1Q9Y3L3 701 aa9.36□□□□□ -0.91
DEPDC1B-202ENST00000453022 ATP8B3O60423 1300 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms