RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 PRMT8Q9NR22 394 aaPredicted RBP18.02■□□□□ 0.48
PRPF40A-204ENST00000450303 DUS2Q9NX74 493 aaKnown RBP18.02■□□□□ 0.48
PRPF40A-204ENST00000450303 EHD2Q9NZN4 543 aa18.02■□□□□ 0.48
PRPF40A-204ENST00000450303 CHORDC1Q9UHD1 332 aaPredicted RBP18.02■□□□□ 0.48
PRPF40A-204ENST00000450303 VPS13AQ96RL7 3174 aa18.02■□□□□ 0.48
PRPF40A-204ENST00000450303 ATP8B3O60423 1300 aa18.01■□□□□ 0.47
PRPF40A-204ENST00000450303 FAM186AA6NE01 2351 aa18.01■□□□□ 0.47
PRPF40A-204ENST00000450303 BEST1O76090 585 aa18.01■□□□□ 0.47
PRPF40A-204ENST00000450303 CD58P19256 250 aa18.01■□□□□ 0.47
PRPF40A-204ENST00000450303 YWHAQP27348 245 aa18.01■□□□□ 0.47
PRPF40A-204ENST00000450303 IFNAR2P48551 515 aa18.01■□□□□ 0.47
PRPF40A-204ENST00000450303 USP4Q13107 963 aa18.01■□□□□ 0.47
PRPF40A-204ENST00000450303 PDGFRLQ15198 375 aa18.01■□□□□ 0.47
PRPF40A-204ENST00000450303 SYCP1Q15431 976 aa18.01■□□□□ 0.47
PRPF40A-204ENST00000450303 NAIF1Q69YI7 327 aaPredicted RBP18.01■□□□□ 0.47
PRPF40A-204ENST00000450303 CRYBG2Q8N1P7 616 aa18.01■□□□□ 0.47
PRPF40A-204ENST00000450303 NEK11Q8NG66 645 aa18.01■□□□□ 0.47
PRPF40A-204ENST00000450303 SLC2A14Q8TDB8 520 aa18.01■□□□□ 0.47
PRPF40A-204ENST00000450303 ATRIPQ8WXE1 791 aa18.01■□□□□ 0.47
PRPF40A-204ENST00000450303 SEMA4DQ92854 862 aa18.01■□□□□ 0.47
PRPF40A-204ENST00000450303 FBXO32Q969P5 355 aa18.01■□□□□ 0.47
PRPF40A-204ENST00000450303 IQCDQ96DY2 449 aa18.01■□□□□ 0.47
PRPF40A-204ENST00000450303 CHFRQ96EP1 664 aa18.01■□□□□ 0.47
PRPF40A-204ENST00000450303 NT5C1BQ96P26 610 aa18.01■□□□□ 0.47
PRPF40A-204ENST00000450303 SLITRK1Q96PX8 696 aa18.01■□□□□ 0.47
PRPF40A-204ENST00000450303 CRACR2AQ9BSW2 395 aa18.01■□□□□ 0.47
PRPF40A-204ENST00000450303 NUP58Q9BVL2 599 aa18.01■□□□□ 0.47
PRPF40A-204ENST00000450303 INTS2Q9H0H0 1204 aaKnown RBP18.01■□□□□ 0.47
PRPF40A-204ENST00000450303 SEMA4AQ9H3S1 761 aa18.01■□□□□ 0.47
PRPF40A-204ENST00000450303 KRT82Q9NSB4 513 aa18.01■□□□□ 0.47
PRPF40A-204ENST00000450303 ZSCAN32Q9NX65 697 aa18.01■□□□□ 0.47
PRPF40A-204ENST00000450303 SMPD4Q9NXE4 827 aa18.01■□□□□ 0.47
PRPF40A-204ENST00000450303 ZKSCAN5Q9Y2L8 839 aa18.01■□□□□ 0.47
PRPF40A-204ENST00000450303 DAAM1Q9Y4D1 1078 aa18.01■□□□□ 0.47
PRPF40A-204ENST00000450303 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.01■□□□□ 0.472e-11■■■■□ 22.7
PRPF40A-204ENST00000450303 DMDP11532 3685 aa18■□□□□ 0.47
PRPF40A-204ENST00000450303 LEFTY2O00292 366 aa18■□□□□ 0.47
PRPF40A-204ENST00000450303 AP5Z1O43299 807 aa18■□□□□ 0.47
PRPF40A-204ENST00000450303 PON1P27169 355 aa18■□□□□ 0.47
PRPF40A-204ENST00000450303 ADORA2BP29275 332 aa18■□□□□ 0.47
PRPF40A-204ENST00000450303 HOXC13P31276 330 aa18■□□□□ 0.47
PRPF40A-204ENST00000450303 CXCL12P48061 93 aa18■□□□□ 0.47
PRPF40A-204ENST00000450303 CCR3P51677 355 aa18■□□□□ 0.47
PRPF40A-204ENST00000450303 DGKKQ5KSL6 1271 aa18■□□□□ 0.47
PRPF40A-204ENST00000450303 UNC93AQ86WB7 457 aa18■□□□□ 0.47
PRPF40A-204ENST00000450303 ZMIZ2Q8NF64 920 aa18■□□□□ 0.47
PRPF40A-204ENST00000450303 OSCP1Q8WVF1 389 aa18■□□□□ 0.47
PRPF40A-204ENST00000450303 SMARCD1Q96GM5 515 aa18■□□□□ 0.47
PRPF40A-204ENST00000450303 FAXDC2Q96IV6 333 aa18■□□□□ 0.47
PRPF40A-204ENST00000450303 SMOQ99835 787 aa18■□□□□ 0.47
PRPF40A-204ENST00000450303 LSM14BQ9BX40 385 aaKnown RBP18■□□□□ 0.47
PRPF40A-204ENST00000450303 ECT2Q9H8V3 914 aa18■□□□□ 0.47
PRPF40A-204ENST00000450303 FBRSL1Q9HCM7 1045 aaKnown RBP18■□□□□ 0.47
PRPF40A-204ENST00000450303 DMAP1Q9NPF5 467 aaPredicted RBP18■□□□□ 0.47
PRPF40A-204ENST00000450303 C2orf42Q9NWW7 574 aa18■□□□□ 0.47
PRPF40A-204ENST00000450303 ARHGAP26Q9UNA1 814 aa18■□□□□ 0.47
PRPF40A-204ENST00000450303 CPQQ9Y646 472 aa18■□□□□ 0.47
PRPF40A-204ENST00000450303 TNFRSF10BO14763 440 aa17.99■□□□□ 0.47
PRPF40A-204ENST00000450303 SCAMP3O14828 347 aaKnown RBP17.99■□□□□ 0.47
PRPF40A-204ENST00000450303 RTN3O95197 1032 aaPredicted RBP17.99■□□□□ 0.47
PRPF40A-204ENST00000450303 TPM1P09493 284 aa17.99■□□□□ 0.47
PRPF40A-204ENST00000450303 TDGF1P13385 188 aa17.99■□□□□ 0.47
PRPF40A-204ENST00000450303 SLC9A1P19634 815 aa17.99■□□□□ 0.47
PRPF40A-204ENST00000450303 GJA4P35212 333 aa17.99■□□□□ 0.47
PRPF40A-204ENST00000450303 PPP3CCP48454 512 aa17.99■□□□□ 0.47
PRPF40A-204ENST00000450303 PDE6CP51160 858 aa17.99■□□□□ 0.47
PRPF40A-204ENST00000450303 GALK1P51570 392 aa17.99■□□□□ 0.47
PRPF40A-204ENST00000450303 SLC5A3P53794 718 aa17.99■□□□□ 0.47
PRPF40A-204ENST00000450303 MAP3K7CLP57077 242 aa17.99■□□□□ 0.47
PRPF40A-204ENST00000450303 KCNMA1Q12791 1236 aa17.99■□□□□ 0.47
PRPF40A-204ENST00000450303 CCINQ13939 588 aa17.99■□□□□ 0.47
PRPF40A-204ENST00000450303 EML3Q32P44 896 aa17.99■□□□□ 0.47
PRPF40A-204ENST00000450303 FSTL4Q6MZW2 842 aa17.99■□□□□ 0.47
PRPF40A-204ENST00000450303 TRIM65Q6PJ69 517 aa17.99■□□□□ 0.47
PRPF40A-204ENST00000450303 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.99■□□□□ 0.47
PRPF40A-204ENST00000450303 DRC7Q8IY82 874 aa17.99■□□□□ 0.47
PRPF40A-204ENST00000450303 SPEM1Q8N4L4 309 aa17.99■□□□□ 0.47
PRPF40A-204ENST00000450303 CPA6Q8N4T0 437 aa17.99■□□□□ 0.47
PRPF40A-204ENST00000450303 ZBTB44Q8NCP5 570 aa17.99■□□□□ 0.47
PRPF40A-204ENST00000450303 NELL1Q92832 810 aa17.99■□□□□ 0.47
PRPF40A-204ENST00000450303 JAKMIP2Q96AA8 810 aa17.99■□□□□ 0.47
PRPF40A-204ENST00000450303 NIF3L1Q9GZT8 377 aa17.99■□□□□ 0.47
PRPF40A-204ENST00000450303 PLCB1Q9NQ66 1216 aa17.99■□□□□ 0.47
PRPF40A-204ENST00000450303 PCDHGA2Q9Y5H1 932 aa17.99■□□□□ 0.47
PRPF40A-204ENST00000450303 ITIH6Q6UXX5 1313 aa17.98■□□□□ 0.47
PRPF40A-204ENST00000450303 OAS1P00973 400 aaKnown RBP17.98■□□□□ 0.47
PRPF40A-204ENST00000450303 EGFP01133 1207 aa17.98■□□□□ 0.47
PRPF40A-204ENST00000450303 MBL2P11226 248 aaPredicted RBP17.98■□□□□ 0.47
PRPF40A-204ENST00000450303 TRIM21P19474 475 aaKnown RBP17.98■□□□□ 0.47
PRPF40A-204ENST00000450303 CDC25BP30305 580 aa17.98■□□□□ 0.47
PRPF40A-204ENST00000450303 DMWDQ09019 674 aa17.98■□□□□ 0.47
PRPF40A-204ENST00000450303 INCA1Q0VD86 236 aa17.98■□□□□ 0.47
PRPF40A-204ENST00000450303 TRIM14Q14142 442 aa17.98■□□□□ 0.47
PRPF40A-204ENST00000450303 ZNF394Q53GI3 561 aa17.98■□□□□ 0.47
PRPF40A-204ENST00000450303 SPECC1LQ69YQ0 1117 aa17.98■□□□□ 0.47
PRPF40A-204ENST00000450303 PKN3Q6P5Z2 889 aa17.98■□□□□ 0.47
PRPF40A-204ENST00000450303 MAMSTRQ6ZN01 415 aa17.98■□□□□ 0.47
PRPF40A-204ENST00000450303 VSTM4Q8IW00 320 aa17.98■□□□□ 0.47
PRPF40A-204ENST00000450303 DCLK2Q8N568 766 aa17.98■□□□□ 0.47
PRPF40A-204ENST00000450303 SUMF1Q8NBK3 374 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms