RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 SFTPA1Q8IWL2 248 aa13.06□□□□□ -0.32
MSH5-209ENST00000450148 PHTF2Q8N3S3 785 aa13.06□□□□□ -0.32
MSH5-209ENST00000450148 SLC4A11Q8NBS3 891 aa13.06□□□□□ -0.32
MSH5-209ENST00000450148 RPLP0P6Q8NHW5 317 aa13.06□□□□□ -0.32
MSH5-209ENST00000450148 USP33Q8TEY7 942 aa13.06□□□□□ -0.32
MSH5-209ENST00000450148 SLC35C1Q96A29 364 aa13.06□□□□□ -0.32
MSH5-209ENST00000450148 FBXO44Q9H4M3 255 aa13.06□□□□□ -0.32
MSH5-209ENST00000450148 NMUR1Q9HB89 426 aa13.06□□□□□ -0.32
MSH5-209ENST00000450148 PNPLA8Q9NP80 782 aa13.06□□□□□ -0.32
MSH5-209ENST00000450148 CYLDQ9NQC7 956 aa13.06□□□□□ -0.32
MSH5-209ENST00000450148 CISHQ9NSE2 258 aa13.06□□□□□ -0.32
MSH5-209ENST00000450148 DLL3Q9NYJ7 618 aa13.06□□□□□ -0.32
MSH5-209ENST00000450148 MAN1B1Q9UKM7 699 aa13.06□□□□□ -0.32
MSH5-209ENST00000450148 SCML2Q9UQR0 700 aa13.06□□□□□ -0.32
MSH5-209ENST00000450148 A0A0A0MRY4 1105 aa13.05□□□□□ -0.32
MSH5-209ENST00000450148 CYP26A1O43174 497 aa13.05□□□□□ -0.32
MSH5-209ENST00000450148 TLR5O60602 858 aa13.05□□□□□ -0.32
MSH5-209ENST00000450148 GADD45BO75293 160 aaPredicted RBP13.05□□□□□ -0.32
MSH5-209ENST00000450148 TBX18O95935 607 aa13.05□□□□□ -0.32
MSH5-209ENST00000450148 EIF2DP41214 584 aaKnown RBP13.05□□□□□ -0.32
MSH5-209ENST00000450148 LRRC63Q05C16 580 aa13.05□□□□□ -0.32
MSH5-209ENST00000450148 ZNF394Q53GI3 561 aa13.05□□□□□ -0.32
MSH5-209ENST00000450148 ISM2Q6H9L7 571 aa13.05□□□□□ -0.32
MSH5-209ENST00000450148 PRR23BQ6ZRT6 265 aa13.05□□□□□ -0.32
MSH5-209ENST00000450148 SCD5Q86SK9 330 aa13.05□□□□□ -0.32
MSH5-209ENST00000450148 BBS7Q8IWZ6 715 aa13.05□□□□□ -0.32
MSH5-209ENST00000450148 ABCA7Q8IZY2 2146 aa13.05□□□□□ -0.32
MSH5-209ENST00000450148 CAMKK1Q8N5S9 505 aa13.05□□□□□ -0.32
MSH5-209ENST00000450148 UBR7Q8N806 425 aa13.05□□□□□ -0.32
MSH5-209ENST00000450148 EXOC4Q96A65 974 aa13.05□□□□□ -0.32
MSH5-209ENST00000450148 OTUB2Q96DC9 234 aa13.05□□□□□ -0.32
MSH5-209ENST00000450148 TSG101Q99816 390 aa13.05□□□□□ -0.32
MSH5-209ENST00000450148 KLF16Q9BXK1 252 aaPredicted RBP13.05□□□□□ -0.32
MSH5-209ENST00000450148 DUSP16Q9BY84 665 aa13.05□□□□□ -0.32
MSH5-209ENST00000450148 FAM124BQ9H5Z6 455 aaPredicted RBP13.05□□□□□ -0.32
MSH5-209ENST00000450148 TLR8Q9NR97 1041 aaKnown RBP13.05□□□□□ -0.32
MSH5-209ENST00000450148 TBC1D14Q9P2M4 693 aa13.05□□□□□ -0.32
MSH5-209ENST00000450148 GMEB2Q9UKD1 530 aa13.05□□□□□ -0.32
MSH5-209ENST00000450148 USP3Q9Y6I4 520 aa13.05□□□□□ -0.32
MSH5-209ENST00000450148 NUP205Q92621 2012 aa13.05□□□□□ -0.32
MSH5-209ENST00000450148 PLXND1Q9Y4D7 1925 aa13.04□□□□□ -0.32
MSH5-209ENST00000450148 PPP1R3GB7ZBB8 358 aa13.04□□□□□ -0.32
MSH5-209ENST00000450148 STX10O60499 249 aa13.04□□□□□ -0.32
MSH5-209ENST00000450148 RETP07949 1114 aa13.04□□□□□ -0.32
MSH5-209ENST00000450148 ACO1P21399 889 aaKnown RBP13.04□□□□□ -0.32
MSH5-209ENST00000450148 DMC1Q14565 340 aa13.04□□□□□ -0.32
MSH5-209ENST00000450148 DCAF17Q5H9S7 520 aaPredicted RBP13.04□□□□□ -0.32
MSH5-209ENST00000450148 LY6G5CQ5SRR4 150 aa13.04□□□□□ -0.32
MSH5-209ENST00000450148 TCERG1LQ5VWI1 586 aa13.04□□□□□ -0.32
MSH5-209ENST00000450148 ARHGAP17Q68EM7 881 aa13.04□□□□□ -0.32
MSH5-209ENST00000450148 TTI2Q6NXR4 508 aa13.04□□□□□ -0.32
MSH5-209ENST00000450148 CCDC186Q7Z3E2 898 aa13.04□□□□□ -0.32
MSH5-209ENST00000450148 ETFBKMTQ8IXQ9 262 aa13.04□□□□□ -0.32
MSH5-209ENST00000450148 ZNF276Q8N554 614 aa13.04□□□□□ -0.32
MSH5-209ENST00000450148 FAM160A2Q8N612 972 aaPredicted RBP13.04□□□□□ -0.32
MSH5-209ENST00000450148 GPR161Q8N6U8 529 aaKnown RBP13.04□□□□□ -0.32
MSH5-209ENST00000450148 CCDC150Q8NCX0 1101 aa13.04□□□□□ -0.32
MSH5-209ENST00000450148 GAB3Q8WWW8 586 aa13.04□□□□□ -0.32
MSH5-209ENST00000450148 JAKMIP2Q96AA8 810 aa13.04□□□□□ -0.32
MSH5-209ENST00000450148 TMEM176AQ96HP8 235 aa13.04□□□□□ -0.32
MSH5-209ENST00000450148 DHTKD1Q96HY7 919 aaPredicted RBP13.04□□□□□ -0.32
MSH5-209ENST00000450148 HHIPQ96QV1 700 aa13.04□□□□□ -0.32
MSH5-209ENST00000450148 GTPBP4Q9BZE4 634 aaKnown RBP13.04□□□□□ -0.32
MSH5-209ENST00000450148 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.04□□□□□ -0.32
MSH5-209ENST00000450148 SLC8A2Q9UPR5 921 aa13.04□□□□□ -0.32
MSH5-209ENST00000450148 THADAQ6YHU6 1953 aa13.03□□□□□ -0.32
MSH5-209ENST00000450148 A0A1W2PQH9 124 aa13.03□□□□□ -0.32
MSH5-209ENST00000450148 PMM2O15305 246 aa13.03□□□□□ -0.32
MSH5-209ENST00000450148 LRP3O75074 770 aa13.03□□□□□ -0.32
MSH5-209ENST00000450148 ADH5P11766 374 aa13.03□□□□□ -0.32
MSH5-209ENST00000450148 HNRNPLP14866 589 aaKnown RBP eCLIP13.03□□□□□ -0.321e-9■■■□□ 15.6
MSH5-209ENST00000450148 KIR2DL1P43626 348 aaPredicted RBP13.03□□□□□ -0.32
MSH5-209ENST00000450148 SPEM2Q0P670 501 aa13.03□□□□□ -0.32
MSH5-209ENST00000450148 MORC3Q14149 939 aa13.03□□□□□ -0.32
MSH5-209ENST00000450148 RAB41Q5JT25 222 aa13.03□□□□□ -0.32
MSH5-209ENST00000450148 KLHDC10Q6PID8 442 aa13.03□□□□□ -0.32
MSH5-209ENST00000450148 FOXR2Q6PJQ5 311 aa13.03□□□□□ -0.32
MSH5-209ENST00000450148 HTR3DQ70Z44 454 aa13.03□□□□□ -0.32
MSH5-209ENST00000450148 ERMP1Q7Z2K6 904 aa13.03□□□□□ -0.32
MSH5-209ENST00000450148 TTC30AQ86WT1 665 aa13.03□□□□□ -0.32
MSH5-209ENST00000450148 TTC39CQ8N584 583 aa13.03□□□□□ -0.32
MSH5-209ENST00000450148 SECISBP2LQ93073 1101 aaKnown RBP13.03□□□□□ -0.32
MSH5-209ENST00000450148 ACDQ96AP0 544 aa13.03□□□□□ -0.32
MSH5-209ENST00000450148 HEXIM2Q96MH2 286 aaKnown RBP13.03□□□□□ -0.32
MSH5-209ENST00000450148 PNKPQ96T60 521 aa13.03□□□□□ -0.32
MSH5-209ENST00000450148 ARMCX3Q9UH62 379 aaPredicted RBP13.03□□□□□ -0.32
MSH5-209ENST00000450148 EBF1Q9UH73 591 aa13.03□□□□□ -0.32
MSH5-209ENST00000450148 NUDT5Q9UKK9 219 aa13.03□□□□□ -0.32
MSH5-209ENST00000450148 RAB23Q9ULC3 237 aa13.03□□□□□ -0.32
MSH5-209ENST00000450148 SH3BP1Q9Y3L3 701 aa13.03□□□□□ -0.32
MSH5-209ENST00000450148 PSMA7O14818 248 aa13.02□□□□□ -0.33
MSH5-209ENST00000450148 MDM4O15151 490 aa13.02□□□□□ -0.33
MSH5-209ENST00000450148 AXIN1O15169 862 aa13.02□□□□□ -0.33
MSH5-209ENST00000450148 HOXC11O43248 304 aaPredicted RBP13.02□□□□□ -0.33
MSH5-209ENST00000450148 RPP40O75818 363 aaKnown RBP13.02□□□□□ -0.33
MSH5-209ENST00000450148 KAT7O95251 611 aa13.02□□□□□ -0.33
MSH5-209ENST00000450148 ADH1CP00326 375 aa13.02□□□□□ -0.33
MSH5-209ENST00000450148 IRF1P10914 325 aa13.02□□□□□ -0.33
MSH5-209ENST00000450148 RARGP13631 454 aa13.02□□□□□ -0.33
MSH5-209ENST00000450148 TRIM21P19474 475 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms