RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 IFT74Q96LB3 600 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 CEP295NLQ96MC4 621 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 GBP5Q96PP8 586 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 ORAI2Q96SN7 254 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 DHRS9Q9BPW9 319 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 HEPHQ9BQS7 1158 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 AIFM2Q9BRQ8 373 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 ERP44Q9BS26 406 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 JAM3Q9BX67 310 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 AGXT2Q9BYV1 514 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 FOXP3Q9BZS1 431 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 ZDHHC5Q9C0B5 715 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 TRIT1Q9H3H1 467 aaKnown RBP3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 CNOT10Q9H9A5 744 aaKnown RBP3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 USP29Q9HBJ7 922 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 EPB41L4AQ9HCS5 686 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 PALMDQ9NP74 551 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 AP5S1Q9NUS5 200 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 THAP1Q9NVV9 213 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 NMRK1Q9NWW6 199 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 PLK2Q9NYY3 685 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 DBF4Q9UBU7 674 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 NKX1-2Q9UD57 310 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 ADGRE2Q9UHX3 823 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 TAGLN3Q9UI15 199 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 TCFL5Q9UL49 500 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 ZMYND8Q9ULU4 1186 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 CFL2Q9Y281 166 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 NOC2LQ9Y3T9 749 aaKnown RBP3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 SNX14Q9Y5W7 946 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 LAMA4Q16363 1823 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 PPLO60437 1756 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 XRN1Q8IZH2 1706 aaKnown RBP3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 COL22A1Q8NFW1 1626 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 MAP3K4Q9Y6R4 1608 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 MYH11P35749 1972 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 TSPOAP1O95153 1857 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 FRMPD2Q68DX3 1309 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 A0A1W2PQ67 120 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 TCRBV5S4A2TA0A5A2 114 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 DYTNA2CJ06 578 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 FUOMA2VDF0 154 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 WTIPA6NIX2 430 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 GNAT3A8MTJ3 354 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 H7BY64 318 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 VILLO15195 856 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 RNF113AO15541 343 aaKnown RBP3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 XPOTO43592 962 aaKnown RBP3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 SNX3O60493 162 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 B3GALNT1O75752 331 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 KRT37O76014 449 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 KLHL2O95198 593 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 STAMBPO95630 424 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 IL33O95760 270 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 APOEP02649 317 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 S100A6P06703 90 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 MYBL1P10243 752 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 SFTPCP11686 197 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 ZNF12P17014 697 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 HSPA6P17066 643 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 TAL1P17542 331 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 VCLP18206 1134 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 SPINK2P20155 84 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 PRKACBP22694 351 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 CFL1P23528 166 aaKnown RBP3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 IL32P24001 234 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 AKAP5P24588 427 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 ADMP35318 185 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 PCK1P35558 622 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 UBA7P41226 1012 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 PIK3CAP42336 1068 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 PRCPP42785 496 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 IFNAR2P48551 515 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 KIF11P52732 1056 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 PDE1AP54750 535 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 RTP1P59025 263 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 RPL11P62913 178 aaKnown RBP3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 MYL5Q02045 173 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 EXOSC9Q06265 439 aaKnown RBP3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 TBL3Q12788 808 aaKnown RBP3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 IKQ13123 557 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 ACVR2BQ13705 512 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 GIT2Q14161 759 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 PDCD1Q15116 288 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 ZNF174Q15697 407 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 GAB4Q2WGN9 574 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 LEXMQ3ZCV2 418 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 TNFAIP8L3Q5GJ75 292 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 C10orf76Q5T2E6 689 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 TMTC4Q5T4D3 741 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 FYB2Q5VWT5 728 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 HAUS3Q68CZ6 603 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 FSTL4Q6MZW2 842 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 B3GNT6Q6ZMB0 384 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 RNF111Q6ZNA4 994 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 BEND4Q6ZU67 534 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 CHST15Q7LFX5 561 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 DGLUCYQ7Z3D6 616 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 KRT27Q7Z3Y8 459 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 PPP1R42Q7Z4L9 355 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms