RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 CACNA1BQ00975 2339 aa16.46■□□□□ 0.23
TRA2A-203ENST00000448549 KMT2BQ9UMN6 2715 aaPredicted RBP16.46■□□□□ 0.22
TRA2A-203ENST00000448549 ZNF638Q14966 1978 aaKnown RBP16.46■□□□□ 0.22
TRA2A-203ENST00000448549 FAM92AA1XBS5 289 aa16.45■□□□□ 0.22
TRA2A-203ENST00000448549 TBC1D3BA6NDS4 549 aa16.45■□□□□ 0.22
TRA2A-203ENST00000448549 KLRC4O43908 158 aa16.45■□□□□ 0.22
TRA2A-203ENST00000448549 BEST1O76090 585 aa16.45■□□□□ 0.22
TRA2A-203ENST00000448549 F13A1P00488 732 aa16.45■□□□□ 0.22
TRA2A-203ENST00000448549 ZDHHC11BP0C7U3 371 aa16.45■□□□□ 0.22
TRA2A-203ENST00000448549 IRF1P10914 325 aa16.45■□□□□ 0.22
TRA2A-203ENST00000448549 TUBP50607 506 aa16.45■□□□□ 0.22
TRA2A-203ENST00000448549 IRX4P78413 519 aa16.45■□□□□ 0.22
TRA2A-203ENST00000448549 SGSM1Q2NKQ1 1148 aa16.45■□□□□ 0.22
TRA2A-203ENST00000448549 ANO4Q32M45 955 aa16.45■□□□□ 0.22
TRA2A-203ENST00000448549 BTBD8Q5XKL5 378 aa16.45■□□□□ 0.22
TRA2A-203ENST00000448549 ARMCX6Q7L4S7 300 aa16.45■□□□□ 0.22
TRA2A-203ENST00000448549 LPCAT2Q7L5N7 544 aa16.45■□□□□ 0.22
TRA2A-203ENST00000448549 TMEM25Q86YD3 366 aa16.45■□□□□ 0.22
TRA2A-203ENST00000448549 ETFBKMTQ8IXQ9 262 aa16.45■□□□□ 0.22
TRA2A-203ENST00000448549 PGBD3Q8N328 593 aa16.45■□□□□ 0.22
TRA2A-203ENST00000448549 KIAA0895Q8NCT3 520 aa16.45■□□□□ 0.22
TRA2A-203ENST00000448549 ZMIZ2Q8NF64 920 aa16.45■□□□□ 0.22
TRA2A-203ENST00000448549 SLC2A14Q8TDB8 520 aa16.45■□□□□ 0.22
TRA2A-203ENST00000448549 PAGE5Q96GU1 130 aa16.45■□□□□ 0.22
TRA2A-203ENST00000448549 SMOQ99835 787 aa16.45■□□□□ 0.22
TRA2A-203ENST00000448549 TMEM9BQ9NQ34 198 aa16.45■□□□□ 0.22
TRA2A-203ENST00000448549 COMMD8Q9NX08 183 aa16.45■□□□□ 0.22
TRA2A-203ENST00000448549 DEC1Q9P2X7 70 aa16.45■□□□□ 0.22
TRA2A-203ENST00000448549 HMGXB4Q9UGU5 601 aa16.45■□□□□ 0.22
TRA2A-203ENST00000448549 MBD1Q9UIS9 605 aaPredicted RBP16.45■□□□□ 0.22
TRA2A-203ENST00000448549 GREB1Q4ZG55 1949 aa16.45■□□□□ 0.22
TRA2A-203ENST00000448549 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.44■□□□□ 0.22
TRA2A-203ENST00000448549 TCRBV21S2A2A0A5A6 115 aa16.44■□□□□ 0.22
TRA2A-203ENST00000448549 CDX4O14627 284 aaPredicted RBP16.44■□□□□ 0.22
TRA2A-203ENST00000448549 HOXC11O43248 304 aaPredicted RBP16.44■□□□□ 0.22
TRA2A-203ENST00000448549 TULP3O75386 442 aa16.44■□□□□ 0.22
TRA2A-203ENST00000448549 SLFN14P0C7P3 912 aa16.44■□□□□ 0.22
TRA2A-203ENST00000448549 P4HA1P13674 534 aa16.44■□□□□ 0.22
TRA2A-203ENST00000448549 PTGER3P43115 390 aa16.44■□□□□ 0.22
TRA2A-203ENST00000448549 NDST1P52848 882 aa16.44■□□□□ 0.22
TRA2A-203ENST00000448549 MAP3K7CLP57077 242 aa16.44■□□□□ 0.22
TRA2A-203ENST00000448549 KMT5BQ4FZB7 885 aa16.44■□□□□ 0.22
TRA2A-203ENST00000448549 SH3PXD2AQ5TCZ1 1133 aa16.44■□□□□ 0.22
TRA2A-203ENST00000448549 SLC9A9Q8IVB4 645 aa16.44■□□□□ 0.22
TRA2A-203ENST00000448549 TMEFF1Q8IYR6 380 aa16.44■□□□□ 0.22
TRA2A-203ENST00000448549 CRYBG2Q8N1P7 616 aa16.44■□□□□ 0.22
TRA2A-203ENST00000448549 C12orf29Q8N999 325 aa16.44■□□□□ 0.22
TRA2A-203ENST00000448549 SNX21Q969T3 373 aa16.44■□□□□ 0.22
TRA2A-203ENST00000448549 SPACA7Q96KW9 195 aa16.44■□□□□ 0.22
TRA2A-203ENST00000448549 KCTD10Q9H3F6 313 aa16.44■□□□□ 0.22
TRA2A-203ENST00000448549 SPHK2Q9NRA0 654 aa16.44■□□□□ 0.22
TRA2A-203ENST00000448549 EXOC1Q9NV70 894 aa16.44■□□□□ 0.22
TRA2A-203ENST00000448549 RALGAPA1Q6GYQ0 2036 aa16.44■□□□□ 0.22
TRA2A-203ENST00000448549 ANAPC1Q9H1A4 1944 aa16.44■□□□□ 0.22
TRA2A-203ENST00000448549 CHD8Q9HCK8 2581 aa16.44■□□□□ 0.22
TRA2A-203ENST00000448549 TRIM24O15164 1050 aa16.43■□□□□ 0.22
TRA2A-203ENST00000448549 ACTN4O43707 911 aaKnown RBP16.43■□□□□ 0.22
TRA2A-203ENST00000448549 TLR5O60602 858 aa16.43■□□□□ 0.22
TRA2A-203ENST00000448549 TBX18O95935 607 aa16.43■□□□□ 0.22
TRA2A-203ENST00000448549 NR3C1P04150 777 aa16.43■□□□□ 0.22
TRA2A-203ENST00000448549 RPN1P04843 607 aaKnown RBP16.43■□□□□ 0.22
TRA2A-203ENST00000448549 DNM1Q05193 864 aaKnown RBP16.43■□□□□ 0.22
TRA2A-203ENST00000448549 MAP7D1Q3KQU3 841 aa16.43■□□□□ 0.22
TRA2A-203ENST00000448549 ZACNQ401N2 412 aa16.43■□□□□ 0.22
TRA2A-203ENST00000448549 C10orf76Q5T2E6 689 aa16.43■□□□□ 0.22
TRA2A-203ENST00000448549 SPOPLQ6IQ16 392 aa16.43■□□□□ 0.22
TRA2A-203ENST00000448549 SV2AQ7L0J3 742 aa16.43■□□□□ 0.22
TRA2A-203ENST00000448549 ZNF513Q8N8E2 541 aaPredicted RBP16.43■□□□□ 0.22
TRA2A-203ENST00000448549 TMEM174Q8WUU8 243 aa16.43■□□□□ 0.22
TRA2A-203ENST00000448549 CSNK1G1Q9HCP0 422 aa16.43■□□□□ 0.22
TRA2A-203ENST00000448549 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.43■□□□□ 0.225e-8■□□□□ 10.8
TRA2A-203ENST00000448549 FAM49BQ9NUQ9 324 aa16.43■□□□□ 0.22
TRA2A-203ENST00000448549 TMEM74BQ9NUR3 256 aa16.43■□□□□ 0.22
TRA2A-203ENST00000448549 RCOR1Q9UKL0 485 aa16.43■□□□□ 0.22
TRA2A-203ENST00000448549 CFAP45Q9UL16 551 aa16.43■□□□□ 0.22
TRA2A-203ENST00000448549 EML5Q05BV3 1969 aa16.42■□□□□ 0.22
TRA2A-203ENST00000448549 PDXKO00764 312 aa16.42■□□□□ 0.22
TRA2A-203ENST00000448549 GREM1O60565 184 aa16.42■□□□□ 0.22
TRA2A-203ENST00000448549 HSP90AA1P07900 732 aaKnown RBP16.42■□□□□ 0.22
TRA2A-203ENST00000448549 PDIA4P13667 645 aaKnown RBP16.42■□□□□ 0.22
TRA2A-203ENST00000448549 ADORA2BP29275 332 aa16.42■□□□□ 0.22
TRA2A-203ENST00000448549 ASPAP45381 313 aa16.42■□□□□ 0.22
TRA2A-203ENST00000448549 PKP1Q13835 747 aa16.42■□□□□ 0.22
TRA2A-203ENST00000448549 BYSLQ13895 437 aaKnown RBP16.42■□□□□ 0.22
TRA2A-203ENST00000448549 UAP1L1Q3KQV9 507 aa16.42■□□□□ 0.22
TRA2A-203ENST00000448549 PREPLQ4J6C6 727 aaPredicted RBP16.42■□□□□ 0.22
TRA2A-203ENST00000448549 TRIM61Q5EBN2 209 aa16.42■□□□□ 0.22
TRA2A-203ENST00000448549 CEP135Q66GS9 1140 aa16.42■□□□□ 0.22
TRA2A-203ENST00000448549 ATL3Q6DD88 541 aa16.42■□□□□ 0.22
TRA2A-203ENST00000448549 HTR3DQ70Z44 454 aa16.42■□□□□ 0.22
TRA2A-203ENST00000448549 UNC93AQ86WB7 457 aa16.42■□□□□ 0.22
TRA2A-203ENST00000448549 TERB1Q8NA31 727 aa16.42■□□□□ 0.22
TRA2A-203ENST00000448549 TMC2Q8TDI7 906 aa16.42■□□□□ 0.22
TRA2A-203ENST00000448549 KCNV2Q8TDN2 545 aa16.42■□□□□ 0.22
TRA2A-203ENST00000448549 TAF4BQ92750 862 aa16.42■□□□□ 0.22
TRA2A-203ENST00000448549 DUSP9Q99956 384 aaKnown RBP16.42■□□□□ 0.22
TRA2A-203ENST00000448549 FBXO44Q9H4M3 255 aa16.42■□□□□ 0.22
TRA2A-203ENST00000448549 TLR8Q9NR97 1041 aaKnown RBP16.42■□□□□ 0.22
TRA2A-203ENST00000448549 HCN2Q9UL51 889 aa16.42■□□□□ 0.22
TRA2A-203ENST00000448549 ASS1P00966 412 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms