RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 SNX25Q9H3E2 840 aa14.59□□□□□ -0.07
PDLIM2-213ENST00000448520 CRTAC1Q9NQ79 661 aa14.59□□□□□ -0.07
PDLIM2-213ENST00000448520 WNT6Q9Y6F9 365 aa14.59□□□□□ -0.07
PDLIM2-213ENST00000448520 EPG5Q9HCE0 2579 aa14.59□□□□□ -0.07
PDLIM2-213ENST00000448520 MYO18AQ92614 2054 aaKnown RBP14.58□□□□□ -0.08
PDLIM2-213ENST00000448520 C2orf78A6NCI8 922 aa14.58□□□□□ -0.08
PDLIM2-213ENST00000448520 SLC9A3R1O14745 358 aaPredicted RBP14.58□□□□□ -0.08
PDLIM2-213ENST00000448520 HCRTO43612 131 aa14.58□□□□□ -0.08
PDLIM2-213ENST00000448520 GNA14O95837 355 aa14.58□□□□□ -0.08
PDLIM2-213ENST00000448520 PRKCSHP14314 528 aaPredicted RBP14.58□□□□□ -0.08
PDLIM2-213ENST00000448520 TNNI1P19237 187 aa14.58□□□□□ -0.08
PDLIM2-213ENST00000448520 GCLMP48507 274 aa14.58□□□□□ -0.08
PDLIM2-213ENST00000448520 COPB1P53618 953 aaKnown RBP14.58□□□□□ -0.08
PDLIM2-213ENST00000448520 NOP14P78316 857 aaKnown RBP14.58□□□□□ -0.08
PDLIM2-213ENST00000448520 CYP27A1Q02318 531 aa14.58□□□□□ -0.08
PDLIM2-213ENST00000448520 DMC1Q14565 340 aa14.58□□□□□ -0.08
PDLIM2-213ENST00000448520 ELF2Q15723 593 aa14.58□□□□□ -0.08
PDLIM2-213ENST00000448520 PLK5Q496M5 336 aa14.58□□□□□ -0.08
PDLIM2-213ENST00000448520 MIIPQ5JXC2 388 aa14.58□□□□□ -0.08
PDLIM2-213ENST00000448520 INTS8Q75QN2 995 aaKnown RBP14.58□□□□□ -0.08
PDLIM2-213ENST00000448520 C11orf74Q86VG3 221 aa14.58□□□□□ -0.08
PDLIM2-213ENST00000448520 TTC16Q8NEE8 873 aa14.58□□□□□ -0.08
PDLIM2-213ENST00000448520 PCED1BQ96HM7 432 aa14.58□□□□□ -0.08
PDLIM2-213ENST00000448520 C8orf48Q96LL4 319 aa14.58□□□□□ -0.08
PDLIM2-213ENST00000448520 TUBGCP2Q9BSJ2 902 aa14.58□□□□□ -0.08
PDLIM2-213ENST00000448520 TTLL2Q9BWV7 592 aa14.58□□□□□ -0.08
PDLIM2-213ENST00000448520 METTL14Q9HCE5 456 aaKnown RBP14.58□□□□□ -0.08
PDLIM2-213ENST00000448520 VPS45Q9NRW7 570 aa14.58□□□□□ -0.08
PDLIM2-213ENST00000448520 LIMA1Q9UHB6 759 aaKnown RBP14.58□□□□□ -0.08
PDLIM2-213ENST00000448520 GON4LQ3T8J9 2241 aa14.58□□□□□ -0.08
PDLIM2-213ENST00000448520 EML5Q05BV3 1969 aa14.58□□□□□ -0.08
PDLIM2-213ENST00000448520 ZNF840PA6NDX5 716 aa14.57□□□□□ -0.08
PDLIM2-213ENST00000448520 TM4SF5O14894 197 aa14.57□□□□□ -0.08
PDLIM2-213ENST00000448520 CST3P01034 146 aaPredicted RBP14.57□□□□□ -0.08
PDLIM2-213ENST00000448520 EEF1GP26641 437 aaKnown RBP14.57□□□□□ -0.08
PDLIM2-213ENST00000448520 PSMC1P62191 440 aaKnown RBP14.57□□□□□ -0.08
PDLIM2-213ENST00000448520 TPM4P67936 248 aa14.57□□□□□ -0.08
PDLIM2-213ENST00000448520 SLC7A9P82251 487 aa14.57□□□□□ -0.08
PDLIM2-213ENST00000448520 FANCCQ00597 558 aa14.57□□□□□ -0.08
PDLIM2-213ENST00000448520 SF3A2Q15428 464 aaKnown RBP14.57□□□□□ -0.08
PDLIM2-213ENST00000448520 MAN2A1Q16706 1144 aa14.57□□□□□ -0.08
PDLIM2-213ENST00000448520 CBWD6Q4V339 395 aa14.57□□□□□ -0.08
PDLIM2-213ENST00000448520 CBWD3Q5JTY5 395 aa14.57□□□□□ -0.08
PDLIM2-213ENST00000448520 CBWD5Q5RIA9 395 aa14.57□□□□□ -0.08
PDLIM2-213ENST00000448520 TDRD10Q5VZ19 366 aaKnown RBP14.57□□□□□ -0.08
PDLIM2-213ENST00000448520 ADGRG2Q8IZP9 1017 aa14.57□□□□□ -0.08
PDLIM2-213ENST00000448520 OR6B3Q8NGW1 331 aa14.57□□□□□ -0.08
PDLIM2-213ENST00000448520 NAP1L5Q96NT1 182 aaPredicted RBP14.57□□□□□ -0.08
PDLIM2-213ENST00000448520 HHIPQ96QV1 700 aa14.57□□□□□ -0.08
PDLIM2-213ENST00000448520 DUSP15Q9H1R2 295 aaPredicted RBP14.57□□□□□ -0.08
PDLIM2-213ENST00000448520 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.57□□□□□ -0.08
PDLIM2-213ENST00000448520 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.57□□□□□ -0.08
PDLIM2-213ENST00000448520 PTPRDP23468 1912 aa14.56□□□□□ -0.08
PDLIM2-213ENST00000448520 MYOFQ9NZM1 2061 aa14.56□□□□□ -0.08
PDLIM2-213ENST00000448520 LEFTY2O00292 366 aa14.56□□□□□ -0.08
PDLIM2-213ENST00000448520 PES1O00541 588 aaKnown RBP14.56□□□□□ -0.08
PDLIM2-213ENST00000448520 STAU1O95793 577 aaKnown RBP14.56□□□□□ -0.08
PDLIM2-213ENST00000448520 PTPN1P18031 435 aaKnown RBP14.56□□□□□ -0.08
PDLIM2-213ENST00000448520 ATICP31939 592 aa14.56□□□□□ -0.08
PDLIM2-213ENST00000448520 MPLP40238 635 aa14.56□□□□□ -0.08
PDLIM2-213ENST00000448520 DGKEP52429 567 aa14.56□□□□□ -0.08
PDLIM2-213ENST00000448520 TNNC1P63316 161 aa14.56□□□□□ -0.08
PDLIM2-213ENST00000448520 MRPS21P82921 87 aaKnown RBP14.56□□□□□ -0.08
PDLIM2-213ENST00000448520 KCNH2Q12809 1159 aa14.56□□□□□ -0.08
PDLIM2-213ENST00000448520 TRPC3Q13507 836 aa14.56□□□□□ -0.08
PDLIM2-213ENST00000448520 CCDC142Q17RM4 750 aa14.56□□□□□ -0.08
PDLIM2-213ENST00000448520 WDR72Q3MJ13 1102 aa14.56□□□□□ -0.08
PDLIM2-213ENST00000448520 VWA3BQ502W6 1294 aa14.56□□□□□ -0.08
PDLIM2-213ENST00000448520 USP39Q53GS9 565 aaKnown RBP14.56□□□□□ -0.08
PDLIM2-213ENST00000448520 STPG1Q5TH74 334 aa14.56□□□□□ -0.08
PDLIM2-213ENST00000448520 USP33Q8TEY7 942 aa14.56□□□□□ -0.08
PDLIM2-213ENST00000448520 SLITRK1Q96PX8 696 aa14.56□□□□□ -0.08
PDLIM2-213ENST00000448520 ELOVL4Q9GZR5 314 aa14.56□□□□□ -0.08
PDLIM2-213ENST00000448520 IFNKQ9P0W0 207 aa14.56□□□□□ -0.08
PDLIM2-213ENST00000448520 F8VP50 259 aa14.55□□□□□ -0.08
PDLIM2-213ENST00000448520 TEX33O43247 280 aa14.55□□□□□ -0.08
PDLIM2-213ENST00000448520 SERPINC1P01008 464 aa14.55□□□□□ -0.08
PDLIM2-213ENST00000448520 C4BPAP04003 597 aaKnown RBP14.55□□□□□ -0.08
PDLIM2-213ENST00000448520 FMO5P49326 533 aa14.55□□□□□ -0.08
PDLIM2-213ENST00000448520 MCCD1P59942 119 aaPredicted RBP14.55□□□□□ -0.08
PDLIM2-213ENST00000448520 USP46P62068 366 aa14.55□□□□□ -0.08
PDLIM2-213ENST00000448520 CLDN10P78369 228 aa14.55□□□□□ -0.08
PDLIM2-213ENST00000448520 HSF5Q4G112 596 aaPredicted RBP14.55□□□□□ -0.08
PDLIM2-213ENST00000448520 MDH1BQ5I0G3 518 aa14.55□□□□□ -0.08
PDLIM2-213ENST00000448520 NAIF1Q69YI7 327 aaPredicted RBP14.55□□□□□ -0.08
PDLIM2-213ENST00000448520 SV2AQ7L0J3 742 aa14.55□□□□□ -0.08
PDLIM2-213ENST00000448520 DDX42Q86XP3 938 aaKnown RBP eCLIP14.55□□□□□ -0.08
PDLIM2-213ENST00000448520 TSTD1Q8NFU3 115 aa14.55□□□□□ -0.08
PDLIM2-213ENST00000448520 EZH1Q92800 747 aaPredicted RBP14.55□□□□□ -0.08
PDLIM2-213ENST00000448520 SEMA4DQ92854 862 aa14.55□□□□□ -0.08
PDLIM2-213ENST00000448520 MRPL45Q9BRJ2 306 aaKnown RBP14.55□□□□□ -0.08
PDLIM2-213ENST00000448520 RNF38Q9H0F5 515 aa14.55□□□□□ -0.08
PDLIM2-213ENST00000448520 POLR3BQ9NW08 1133 aaPredicted RBP14.55□□□□□ -0.08
PDLIM2-213ENST00000448520 TBC1D14Q9P2M4 693 aa14.55□□□□□ -0.08
PDLIM2-213ENST00000448520 THADAQ6YHU6 1953 aa14.54□□□□□ -0.08
PDLIM2-213ENST00000448520 NUP205Q92621 2012 aa14.54□□□□□ -0.08
PDLIM2-213ENST00000448520 BCLAF3A2AJT9 711 aaKnown RBP14.54□□□□□ -0.08
PDLIM2-213ENST00000448520 LGALS16A8MUM7 142 aa14.54□□□□□ -0.08
PDLIM2-213ENST00000448520 A8MXQ7 604 aa14.54□□□□□ -0.08
PDLIM2-213ENST00000448520 K7EQS6 105 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms