RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 TMPRSS12Q86WS5 348 aa5.63□□□□□ -1.51
SDCBP-205ENST00000447267 RALGPS2Q86X27 583 aaPredicted RBP5.63□□□□□ -1.51
SDCBP-205ENST00000447267 MFSD6LQ8IWD5 586 aa5.63□□□□□ -1.51
SDCBP-205ENST00000447267 YAF2Q8IY57 180 aa5.63□□□□□ -1.51
SDCBP-205ENST00000447267 KIAA0319LQ8IZA0 1049 aa5.63□□□□□ -1.51
SDCBP-205ENST00000447267 ZNF248Q8NDW4 579 aa5.63□□□□□ -1.51
SDCBP-205ENST00000447267 SNRNP27Q8WVK2 155 aaKnown RBP5.63□□□□□ -1.51
SDCBP-205ENST00000447267 ZNF668Q96K58 619 aaPredicted RBP5.63□□□□□ -1.51
SDCBP-205ENST00000447267 TMEM209Q96SK2 561 aa5.63□□□□□ -1.51
SDCBP-205ENST00000447267 PDCD2LQ9BRP1 358 aa5.63□□□□□ -1.51
SDCBP-205ENST00000447267 CPVLQ9H3G5 476 aa5.63□□□□□ -1.51
SDCBP-205ENST00000447267 FBRSL1Q9HCM7 1045 aaKnown RBP5.63□□□□□ -1.51
SDCBP-205ENST00000447267 GPRC5CQ9NQ84 441 aa5.63□□□□□ -1.51
SDCBP-205ENST00000447267 MARCH5Q9NX47 278 aa5.63□□□□□ -1.51
SDCBP-205ENST00000447267 RTEL1Q9NZ71 1219 aa5.63□□□□□ -1.51
SDCBP-205ENST00000447267 PRR13Q9NZ81 148 aa5.63□□□□□ -1.51
SDCBP-205ENST00000447267 FBXW11Q9UKB1 542 aa5.63□□□□□ -1.51
SDCBP-205ENST00000447267 SYNPO2Q9UMS6 1093 aa5.63□□□□□ -1.51
SDCBP-205ENST00000447267 PCDHA1Q9Y5I3 950 aa5.63□□□□□ -1.51
SDCBP-205ENST00000447267 SLC4A4Q9Y6R1 1079 aa5.63□□□□□ -1.51
SDCBP-205ENST00000447267 ZMYM6O95789 1325 aa5.63□□□□□ -1.51
SDCBP-205ENST00000447267 GON4LQ3T8J9 2241 aa5.62□□□□□ -1.51
SDCBP-205ENST00000447267 A0A0U1RQF3 1178 aa5.62□□□□□ -1.51
SDCBP-205ENST00000447267 SMIM35A0A1B0GVV1 85 aa5.62□□□□□ -1.51
SDCBP-205ENST00000447267 WDR27A2RRH5 827 aa5.62□□□□□ -1.51
SDCBP-205ENST00000447267 ANTXRLA6NF34 631 aa5.62□□□□□ -1.51
SDCBP-205ENST00000447267 PRRG2O14669 202 aa5.62□□□□□ -1.51
SDCBP-205ENST00000447267 N4BP3O15049 544 aa5.62□□□□□ -1.51
SDCBP-205ENST00000447267 NMT2O60551 498 aa5.62□□□□□ -1.51
SDCBP-205ENST00000447267 OFD1O75665 1012 aa5.62□□□□□ -1.51
SDCBP-205ENST00000447267 RECKO95980 971 aa5.62□□□□□ -1.51
SDCBP-205ENST00000447267 HSPD1P10809 573 aaKnown RBP5.62□□□□□ -1.51
SDCBP-205ENST00000447267 GJA1P17302 382 aa5.62□□□□□ -1.51
SDCBP-205ENST00000447267 BMP7P18075 431 aa5.62□□□□□ -1.51
SDCBP-205ENST00000447267 CCR2P41597 374 aa5.62□□□□□ -1.51
SDCBP-205ENST00000447267 EPHA5P54756 1037 aa5.62□□□□□ -1.51
SDCBP-205ENST00000447267 TFAP4Q01664 338 aa5.62□□□□□ -1.51
SDCBP-205ENST00000447267 ODR4Q5SWX8 454 aa5.62□□□□□ -1.51
SDCBP-205ENST00000447267 LIN9Q5TKA1 542 aa5.62□□□□□ -1.51
SDCBP-205ENST00000447267 NAIF1Q69YI7 327 aaPredicted RBP5.62□□□□□ -1.51
SDCBP-205ENST00000447267 GALNT18Q6P9A2 607 aa5.62□□□□□ -1.51
SDCBP-205ENST00000447267 MTHFD1LQ6UB35 978 aa5.62□□□□□ -1.51
SDCBP-205ENST00000447267 UNC5AQ6ZN44 842 aa5.62□□□□□ -1.51
SDCBP-205ENST00000447267 NME8Q8N427 588 aa5.62□□□□□ -1.51
SDCBP-205ENST00000447267 TAB3Q8N5C8 712 aaPredicted RBP5.62□□□□□ -1.51
SDCBP-205ENST00000447267 TSTD1Q8NFU3 115 aa5.62□□□□□ -1.51
SDCBP-205ENST00000447267 RPLP0P6Q8NHW5 317 aa5.62□□□□□ -1.51
SDCBP-205ENST00000447267 CEP76Q8TAP6 659 aa5.62□□□□□ -1.51
SDCBP-205ENST00000447267 SPATA20Q8TB22 786 aa5.62□□□□□ -1.51
SDCBP-205ENST00000447267 SLC7A14Q8TBB6 771 aa5.62□□□□□ -1.51
SDCBP-205ENST00000447267 SMARCD2Q92925 531 aa5.62□□□□□ -1.51
SDCBP-205ENST00000447267 EXTL1Q92935 676 aa5.62□□□□□ -1.51
SDCBP-205ENST00000447267 BRF1Q92994 677 aa5.62□□□□□ -1.51
SDCBP-205ENST00000447267 SIGLEC10Q96LC7 697 aa5.62□□□□□ -1.51
SDCBP-205ENST00000447267 FAM20AQ96MK3 541 aa5.62□□□□□ -1.51
SDCBP-205ENST00000447267 MBOAT7Q96N66 472 aa5.62□□□□□ -1.51
SDCBP-205ENST00000447267 LRRC3BQ96PB8 259 aa5.62□□□□□ -1.51
SDCBP-205ENST00000447267 DBNLQ9UJU6 430 aaKnown RBP5.62□□□□□ -1.51
SDCBP-205ENST00000447267 STX8Q9UNK0 236 aa5.62□□□□□ -1.51
SDCBP-205ENST00000447267 SSX2IPQ9Y2D8 614 aa5.62□□□□□ -1.51
SDCBP-205ENST00000447267 ZNF451Q9Y4E5 1061 aa5.62□□□□□ -1.51
SDCBP-205ENST00000447267 TAF6LQ9Y6J9 622 aa5.62□□□□□ -1.51
SDCBP-205ENST00000447267 SVILO95425 2214 aa5.62□□□□□ -1.51
SDCBP-205ENST00000447267 ADGRG4Q8IZF6 3080 aa5.61□□□□□ -1.51
SDCBP-205ENST00000447267 GSTTP1A0A1W2PQM5 241 aa5.61□□□□□ -1.51
SDCBP-205ENST00000447267 NUDT19A8MXV4 375 aa5.61□□□□□ -1.51
SDCBP-205ENST00000447267 K7ENP7 123 aa5.61□□□□□ -1.51
SDCBP-205ENST00000447267 ADAM12O43184 909 aa5.61□□□□□ -1.51
SDCBP-205ENST00000447267 CBFA2T2O43439 604 aa5.61□□□□□ -1.51
SDCBP-205ENST00000447267 VTNP04004 478 aa5.61□□□□□ -1.51
SDCBP-205ENST00000447267 TP53P04637 393 aaPredicted RBP5.61□□□□□ -1.51
SDCBP-205ENST00000447267 GSTM1P09488 218 aa5.61□□□□□ -1.51
SDCBP-205ENST00000447267 TSPY3P0CV98 308 aa5.61□□□□□ -1.51
SDCBP-205ENST00000447267 TSPY8P0CW00 308 aa5.61□□□□□ -1.51
SDCBP-205ENST00000447267 KLRC1P26715 233 aa5.61□□□□□ -1.51
SDCBP-205ENST00000447267 CRYBB1P53674 252 aaPredicted RBP5.61□□□□□ -1.51
SDCBP-205ENST00000447267 NCKAP1LP55160 1127 aa5.61□□□□□ -1.51
SDCBP-205ENST00000447267 EML5Q05BV3 1969 aa5.61□□□□□ -1.51
SDCBP-205ENST00000447267 NEDD9Q14511 834 aa5.61□□□□□ -1.51
SDCBP-205ENST00000447267 PGM5Q15124 567 aa5.61□□□□□ -1.51
SDCBP-205ENST00000447267 VMACQ2NL98 169 aa5.61□□□□□ -1.51
SDCBP-205ENST00000447267 PLEKHG6Q3KR16 790 aa5.61□□□□□ -1.51
SDCBP-205ENST00000447267 TMEM196Q5HYL7 178 aa5.61□□□□□ -1.51
SDCBP-205ENST00000447267 INO80CQ6PI98 192 aaPredicted RBP5.61□□□□□ -1.51
SDCBP-205ENST00000447267 RPTNQ6XPR3 784 aa5.61□□□□□ -1.51
SDCBP-205ENST00000447267 SYT13Q7L8C5 426 aa5.61□□□□□ -1.51
SDCBP-205ENST00000447267 LSRQ86X29 649 aaPredicted RBP5.61□□□□□ -1.51
SDCBP-205ENST00000447267 RBBP8NLQ8NC74 664 aaPredicted RBP5.61□□□□□ -1.51
SDCBP-205ENST00000447267 NUP43Q8NFH3 380 aa5.61□□□□□ -1.51
SDCBP-205ENST00000447267 MZB1Q8WU39 189 aa5.61□□□□□ -1.51
SDCBP-205ENST00000447267 DEPDC1BQ8WUY9 529 aa5.61□□□□□ -1.51
SDCBP-205ENST00000447267 NUP205Q92621 2012 aa5.61□□□□□ -1.51
SDCBP-205ENST00000447267 MSANTD3Q96H12 275 aa5.61□□□□□ -1.51
SDCBP-205ENST00000447267 CDC6Q99741 560 aa5.61□□□□□ -1.51
SDCBP-205ENST00000447267 GP6Q9HCN6 339 aa5.61□□□□□ -1.51
SDCBP-205ENST00000447267 SIRT5Q9NXA8 310 aa5.61□□□□□ -1.51
SDCBP-205ENST00000447267 ERAP1Q9NZ08 941 aa5.61□□□□□ -1.51
SDCBP-205ENST00000447267 PNMA2Q9UL42 364 aa5.61□□□□□ -1.51
SDCBP-205ENST00000447267 PCDHA5Q9Y5H7 936 aa5.61□□□□□ -1.51
SDCBP-205ENST00000447267 NBEAL1Q6ZS30 2694 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms