RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 PCMTD1Q96MG8 357 aaPredicted RBP25.22■■□□□ 1.63
C9orf3-207ENST00000445181 ZSWIM1Q9BR11 485 aa25.22■■□□□ 1.63
C9orf3-207ENST00000445181 LRRC4Q9HBW1 653 aa25.22■■□□□ 1.63
C9orf3-207ENST00000445181 MRPS17Q9Y2R5 130 aaKnown RBP25.22■■□□□ 1.63
C9orf3-207ENST00000445181 MYO16Q9Y6X6 1858 aa25.21■■□□□ 1.63
C9orf3-207ENST00000445181 LGALS16A8MUM7 142 aa25.21■■□□□ 1.63
C9orf3-207ENST00000445181 TULP2O00295 520 aa25.21■■□□□ 1.63
C9orf3-207ENST00000445181 CHADO15335 359 aa25.21■■□□□ 1.63
C9orf3-207ENST00000445181 OAS1P00973 400 aaKnown RBP25.21■■□□□ 1.63
C9orf3-207ENST00000445181 MBL2P11226 248 aaPredicted RBP25.21■■□□□ 1.63
C9orf3-207ENST00000445181 TKTL1P51854 596 aa25.21■■□□□ 1.63
C9orf3-207ENST00000445181 UBXN1Q04323 297 aa25.21■■□□□ 1.63
C9orf3-207ENST00000445181 NFKBIBQ15653 356 aa25.21■■□□□ 1.63
C9orf3-207ENST00000445181 SNX30Q5VWJ9 437 aa25.21■■□□□ 1.63
C9orf3-207ENST00000445181 CSGALNACT1Q8TDX6 532 aa25.21■■□□□ 1.63
C9orf3-207ENST00000445181 SECISBP2LQ93073 1101 aaKnown RBP25.21■■□□□ 1.63
C9orf3-207ENST00000445181 ZFYVE19Q96K21 471 aa25.21■■□□□ 1.63
C9orf3-207ENST00000445181 RNF38Q9H0F5 515 aa25.21■■□□□ 1.63
C9orf3-207ENST00000445181 CCSER2Q9H7U1 834 aa25.21■■□□□ 1.63
C9orf3-207ENST00000445181 ARHGAP26Q9UNA1 814 aa25.21■■□□□ 1.63
C9orf3-207ENST00000445181 FHOD1Q9Y613 1164 aa25.21■■□□□ 1.63
C9orf3-207ENST00000445181 SHISA7A6NL88 538 aa25.2■■□□□ 1.62
C9orf3-207ENST00000445181 MAN2B1O00754 1011 aa25.2■■□□□ 1.62
C9orf3-207ENST00000445181 NCAM2O15394 837 aa25.2■■□□□ 1.62
C9orf3-207ENST00000445181 ZDHHC11BP0C7U3 371 aa25.2■■□□□ 1.62
C9orf3-207ENST00000445181 UCHL3P15374 230 aa25.2■■□□□ 1.62
C9orf3-207ENST00000445181 PLA2G4AP47712 749 aa25.2■■□□□ 1.62
C9orf3-207ENST00000445181 TUBP50607 506 aa25.2■■□□□ 1.62
C9orf3-207ENST00000445181 TPM4P67936 248 aa25.2■■□□□ 1.62
C9orf3-207ENST00000445181 PLCB2Q00722 1185 aa25.2■■□□□ 1.62
C9orf3-207ENST00000445181 DPY19L2P1Q6NXN4 242 aa25.2■■□□□ 1.62
C9orf3-207ENST00000445181 CCDC186Q7Z3E2 898 aa25.2■■□□□ 1.62
C9orf3-207ENST00000445181 SIX6OS1Q8N1H7 587 aa25.2■■□□□ 1.62
C9orf3-207ENST00000445181 SH3RF2Q8TEC5 729 aa25.2■■□□□ 1.62
C9orf3-207ENST00000445181 ACP6Q9NPH0 428 aa25.2■■□□□ 1.62
C9orf3-207ENST00000445181 PLCB1Q9NQ66 1216 aa25.2■■□□□ 1.62
C9orf3-207ENST00000445181 SMPD4Q9NXE4 827 aa25.2■■□□□ 1.62
C9orf3-207ENST00000445181 NAGPAQ9UK23 515 aa25.2■■□□□ 1.62
C9orf3-207ENST00000445181 CPQQ9Y646 472 aa25.2■■□□□ 1.62
C9orf3-207ENST00000445181 USP3Q9Y6I4 520 aa25.2■■□□□ 1.62
C9orf3-207ENST00000445181 A0A1W2PQH9 124 aa25.19■■□□□ 1.62
C9orf3-207ENST00000445181 LRRC10BA6NIK2 292 aa25.19■■□□□ 1.62
C9orf3-207ENST00000445181 FOXN3O00409 490 aaPredicted RBP25.19■■□□□ 1.62
C9orf3-207ENST00000445181 COCHO43405 550 aa25.19■■□□□ 1.62
C9orf3-207ENST00000445181 CAVIN2O95810 425 aa25.19■■□□□ 1.62
C9orf3-207ENST00000445181 KLK7P49862 253 aa25.19■■□□□ 1.62
C9orf3-207ENST00000445181 SLC7A9P82251 487 aa25.19■■□□□ 1.62
C9orf3-207ENST00000445181 PTK2Q05397 1052 aa25.19■■□□□ 1.62
C9orf3-207ENST00000445181 DRAP1Q14919 205 aaPredicted RBP25.19■■□□□ 1.62
C9orf3-207ENST00000445181 PKDCCQ504Y2 493 aa25.19■■□□□ 1.62
C9orf3-207ENST00000445181 RAB41Q5JT25 222 aa25.19■■□□□ 1.62
C9orf3-207ENST00000445181 ASCL5Q7RTU5 278 aa25.19■■□□□ 1.62
C9orf3-207ENST00000445181 ZNF606Q8WXB4 792 aa25.19■■□□□ 1.62
C9orf3-207ENST00000445181 CLDN23Q96B33 292 aa25.19■■□□□ 1.62
C9orf3-207ENST00000445181 CBX8Q9HC52 389 aa25.19■■□□□ 1.62
C9orf3-207ENST00000445181 FAM207AQ9NSI2 230 aaPredicted RBP25.19■■□□□ 1.62
C9orf3-207ENST00000445181 SPATA6Q9NWH7 488 aaPredicted RBP25.19■■□□□ 1.62
C9orf3-207ENST00000445181 PIAS3Q9Y6X2 628 aa25.19■■□□□ 1.62
C9orf3-207ENST00000445181 ARNTLO00327 626 aa25.18■■□□□ 1.62
C9orf3-207ENST00000445181 TLR5O60602 858 aa25.18■■□□□ 1.62
C9orf3-207ENST00000445181 OLFM2O95897 454 aa25.18■■□□□ 1.62
C9orf3-207ENST00000445181 ZBED1O96006 694 aa25.18■■□□□ 1.62
C9orf3-207ENST00000445181 PNMA6AP0CW24 399 aaPredicted RBP25.18■■□□□ 1.62
C9orf3-207ENST00000445181 LCP1P13796 627 aa25.18■■□□□ 1.62
C9orf3-207ENST00000445181 MAGEA9P43362 315 aa25.18■■□□□ 1.62
C9orf3-207ENST00000445181 PGFP49763 221 aa25.18■■□□□ 1.62
C9orf3-207ENST00000445181 PSEN1P49768 467 aa25.18■■□□□ 1.62
C9orf3-207ENST00000445181 RGS7P49802 495 aa25.18■■□□□ 1.62
C9orf3-207ENST00000445181 ADIGQ0VDE8 80 aa25.18■■□□□ 1.62
C9orf3-207ENST00000445181 MTF1Q14872 753 aa25.18■■□□□ 1.62
C9orf3-207ENST00000445181 IQCB1Q15051 598 aa25.18■■□□□ 1.62
C9orf3-207ENST00000445181 SYCP1Q15431 976 aa25.18■■□□□ 1.62
C9orf3-207ENST00000445181 ZNF77Q15935 545 aa25.18■■□□□ 1.62
C9orf3-207ENST00000445181 ARHGAP18Q8N392 663 aa25.18■■□□□ 1.62
C9orf3-207ENST00000445181 NKD2Q969F2 451 aaPredicted RBP25.18■■□□□ 1.62
C9orf3-207ENST00000445181 GKN1Q9NS71 199 aa25.18■■□□□ 1.62
C9orf3-207ENST00000445181 NDRG2Q9UN36 371 aaKnown RBP25.18■■□□□ 1.62
C9orf3-207ENST00000445181 MIA3Q5JRA6 1907 aa25.18■■□□□ 1.62
C9orf3-207ENST00000445181 LEFTY2O00292 366 aa25.17■■□□□ 1.62
C9orf3-207ENST00000445181 RARGP13631 454 aa25.17■■□□□ 1.62
C9orf3-207ENST00000445181 KPNA1P52294 538 aaPredicted RBP25.17■■□□□ 1.62
C9orf3-207ENST00000445181 USP4Q13107 963 aa25.17■■□□□ 1.62
C9orf3-207ENST00000445181 FILIP1LQ4L180 1135 aa25.17■■□□□ 1.62
C9orf3-207ENST00000445181 SMYD5Q6GMV2 418 aa25.17■■□□□ 1.62
C9orf3-207ENST00000445181 SLC35F5Q8WV83 523 aa25.17■■□□□ 1.62
C9orf3-207ENST00000445181 KCTD13Q8WZ19 329 aa25.17■■□□□ 1.62
C9orf3-207ENST00000445181 FAM3CQ92520 227 aa25.17■■□□□ 1.62
C9orf3-207ENST00000445181 ULBP1Q9BZM6 244 aa25.17■■□□□ 1.62
C9orf3-207ENST00000445181 NMUR1Q9HB89 426 aa25.17■■□□□ 1.62
C9orf3-207ENST00000445181 ZFHX2Q9C0A1 2572 aaPredicted RBP25.17■■□□□ 1.62
C9orf3-207ENST00000445181 PRR23AA6NEV1 266 aa25.16■■□□□ 1.62
C9orf3-207ENST00000445181 SP9P0CG40 484 aa25.16■■□□□ 1.62
C9orf3-207ENST00000445181 RALAP11233 206 aa25.16■■□□□ 1.62
C9orf3-207ENST00000445181 BPIFB4P59827 614 aa25.16■■□□□ 1.62
C9orf3-207ENST00000445181 POLR2FP61218 127 aaKnown RBP25.16■■□□□ 1.62
C9orf3-207ENST00000445181 FZD5Q13467 585 aa25.16■■□□□ 1.62
C9orf3-207ENST00000445181 PMF1Q6P1K2 205 aa25.16■■□□□ 1.62
C9orf3-207ENST00000445181 DENND1BQ6P3S1 775 aa25.16■■□□□ 1.62
C9orf3-207ENST00000445181 APTXQ7Z2E3 356 aaKnown RBP25.16■■□□□ 1.62
C9orf3-207ENST00000445181 TADA2BQ86TJ2 420 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms