RNA–Protein interactions for RNA: ENST00000445140.6

FXR1-203, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FXR1, Length 2,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-203ENST00000445140 CTNNBL1Q8WYA6 563 aaPredicted RBP9.21□□□□□ -0.94
FXR1-203ENST00000445140 TSC1Q92574 1164 aa9.21□□□□□ -0.94
FXR1-203ENST00000445140 PABPC5Q96DU9 382 aaKnown RBP9.21□□□□□ -0.94
FXR1-203ENST00000445140 DDX23Q9BUQ8 820 aaKnown RBP9.21□□□□□ -0.94
FXR1-203ENST00000445140 RETREG1Q9H6L5 497 aa9.21□□□□□ -0.94
FXR1-203ENST00000445140 IL21Q9HBE4 155 aa9.21□□□□□ -0.94
FXR1-203ENST00000445140 LRRC4Q9HBW1 653 aa9.21□□□□□ -0.94
FXR1-203ENST00000445140 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.21□□□□□ -0.943e-6■■■■■ 37.6
FXR1-203ENST00000445140 ZKSCAN5Q9Y2L8 839 aa9.21□□□□□ -0.94
FXR1-203ENST00000445140 PCDHGC5Q9Y5F6 944 aa9.21□□□□□ -0.94
FXR1-203ENST00000445140 ZFP37Q9Y6Q3 630 aaPredicted RBP9.21□□□□□ -0.94
FXR1-203ENST00000445140 TMEM191CA6NGB0 347 aa9.2□□□□□ -0.94
FXR1-203ENST00000445140 ZNF487B1APH4 448 aa9.2□□□□□ -0.94
FXR1-203ENST00000445140 CLDN5O00501 218 aa9.2□□□□□ -0.94
FXR1-203ENST00000445140 BEST1O76090 585 aa9.2□□□□□ -0.94
FXR1-203ENST00000445140 CLSTN1O94985 981 aa9.2□□□□□ -0.94
FXR1-203ENST00000445140 PTMAP06454 111 aaKnown RBP9.2□□□□□ -0.94
FXR1-203ENST00000445140 C8AP07357 584 aa9.2□□□□□ -0.94
FXR1-203ENST00000445140 OR4Q2P0C623 313 aa9.2□□□□□ -0.94
FXR1-203ENST00000445140 MAGEA1P43355 309 aa9.2□□□□□ -0.94
FXR1-203ENST00000445140 DUSP4Q13115 394 aa9.2□□□□□ -0.94
FXR1-203ENST00000445140 MAMLD1Q13495 774 aa9.2□□□□□ -0.94
FXR1-203ENST00000445140 PRSS36Q5K4E3 855 aa9.2□□□□□ -0.94
FXR1-203ENST00000445140 TAF3Q5VWG9 929 aa9.2□□□□□ -0.94
FXR1-203ENST00000445140 ANKRD54Q6NXT1 300 aa9.2□□□□□ -0.94
FXR1-203ENST00000445140 MTERF4Q7Z6M4 381 aaKnown RBP9.2□□□□□ -0.94
FXR1-203ENST00000445140 AZIN2Q96A70 460 aa9.2□□□□□ -0.94
FXR1-203ENST00000445140 ZNF707Q96C28 371 aaPredicted RBP9.2□□□□□ -0.94
FXR1-203ENST00000445140 TLE6Q9H808 572 aa9.2□□□□□ -0.94
FXR1-203ENST00000445140 HCFC2Q9Y5Z7 792 aa9.2□□□□□ -0.94
FXR1-203ENST00000445140 E5RJQ4 531 aa9.2□□□□□ -0.94
FXR1-203ENST00000445140 SOX1O00570 391 aaPredicted RBP9.2□□□□□ -0.94
FXR1-203ENST00000445140 F11P03951 625 aa9.2□□□□□ -0.94
FXR1-203ENST00000445140 YWHAQP27348 245 aa9.2□□□□□ -0.94
FXR1-203ENST00000445140 GRIK1P39086 918 aa9.2□□□□□ -0.94
FXR1-203ENST00000445140 SLC1A1P43005 524 aa9.2□□□□□ -0.94
FXR1-203ENST00000445140 ZNF135P52742 658 aaPredicted RBP9.2□□□□□ -0.94
FXR1-203ENST00000445140 MAP3K7CLP57077 242 aa9.2□□□□□ -0.94
FXR1-203ENST00000445140 ARID5AQ03989 594 aa9.2□□□□□ -0.94
FXR1-203ENST00000445140 RING1Q06587 406 aa9.2□□□□□ -0.94
FXR1-203ENST00000445140 ORC1Q13415 861 aa9.2□□□□□ -0.94
FXR1-203ENST00000445140 HABP4Q5JVS0 413 aaKnown RBP9.2□□□□□ -0.94
FXR1-203ENST00000445140 LRRC38Q5VT99 294 aa9.2□□□□□ -0.94
FXR1-203ENST00000445140 FAM183BPQ6ZVS7 135 aa9.2□□□□□ -0.94
FXR1-203ENST00000445140 STRADAQ7RTN6 431 aa9.2□□□□□ -0.94
FXR1-203ENST00000445140 ADGRD2Q7Z7M1 963 aa9.2□□□□□ -0.94
FXR1-203ENST00000445140 GPR149Q86SP6 731 aa9.2□□□□□ -0.94
FXR1-203ENST00000445140 ELMOD1Q8N336 334 aa9.2□□□□□ -0.94
FXR1-203ENST00000445140 MSLNLQ96KJ4 702 aa9.2□□□□□ -0.94
FXR1-203ENST00000445140 SMOC2Q9H3U7 446 aa9.2□□□□□ -0.94
FXR1-203ENST00000445140 TRPV4Q9HBA0 871 aa9.2□□□□□ -0.94
FXR1-203ENST00000445140 MAN1C1Q9NR34 630 aa9.2□□□□□ -0.94
FXR1-203ENST00000445140 ABCC13Q9NSE7 274 aa9.2□□□□□ -0.94
FXR1-203ENST00000445140 TAS2R14Q9NYV8 317 aa9.2□□□□□ -0.94
FXR1-203ENST00000445140 PCDH10Q9P2E7 1040 aa9.2□□□□□ -0.94
FXR1-203ENST00000445140 PPP2R2CQ9Y2T4 447 aa9.2□□□□□ -0.94
FXR1-203ENST00000445140 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.2□□□□□ -0.946e-7■■■□□ 15.1
FXR1-203ENST00000445140 COL4A2P08572 1712 aa9.2□□□□□ -0.94
FXR1-203ENST00000445140 C2CD4BA6NLJ0 364 aa9.19□□□□□ -0.94
FXR1-203ENST00000445140 DYNC1I1O14576 645 aa9.19□□□□□ -0.94
FXR1-203ENST00000445140 ZNF197O14709 1029 aa9.19□□□□□ -0.94
FXR1-203ENST00000445140 GLP2RO95838 553 aa9.19□□□□□ -0.94
FXR1-203ENST00000445140 RPL17P18621 184 aaKnown RBP9.19□□□□□ -0.94
FXR1-203ENST00000445140 PCK1P35558 622 aa9.19□□□□□ -0.94
FXR1-203ENST00000445140 TKTL1P51854 596 aa9.19□□□□□ -0.94
FXR1-203ENST00000445140 KPNA1P52294 538 aaPredicted RBP9.19□□□□□ -0.94
FXR1-203ENST00000445140 NRG1Q02297 640 aaPredicted RBP9.19□□□□□ -0.94
FXR1-203ENST00000445140 CCDC142Q17RM4 750 aa9.19□□□□□ -0.94
FXR1-203ENST00000445140 PPM1LQ5SGD2 360 aa9.19□□□□□ -0.94
FXR1-203ENST00000445140 MMS22LQ6ZRQ5 1243 aa9.19□□□□□ -0.94
FXR1-203ENST00000445140 GPRIN1Q7Z2K8 1008 aa9.19□□□□□ -0.94
FXR1-203ENST00000445140 SIX6OS1Q8N1H7 587 aa9.19□□□□□ -0.94
FXR1-203ENST00000445140 UBA3Q8TBC4 463 aa9.19□□□□□ -0.94
FXR1-203ENST00000445140 NECTIN4Q96NY8 510 aa9.19□□□□□ -0.94
FXR1-203ENST00000445140 NPY6RQ99463 290 aa9.19□□□□□ -0.94
FXR1-203ENST00000445140 LPIN3Q9BQK8 851 aa9.19□□□□□ -0.94
FXR1-203ENST00000445140 PRDM16Q9HAZ2 1276 aa9.19□□□□□ -0.94
FXR1-203ENST00000445140 CYP4F11Q9HBI6 524 aa9.19□□□□□ -0.94
FXR1-203ENST00000445140 POPDC2Q9HBU9 364 aa9.19□□□□□ -0.94
FXR1-203ENST00000445140 TLR8Q9NR97 1041 aaKnown RBP9.19□□□□□ -0.94
FXR1-203ENST00000445140 OBP2AQ9NY56 170 aa9.19□□□□□ -0.94
FXR1-203ENST00000445140 CEP290O15078 2479 aa9.19□□□□□ -0.94
FXR1-203ENST00000445140 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.19□□□□□ -0.94
FXR1-203ENST00000445140 PRRG1O14668 218 aa9.19□□□□□ -0.94
FXR1-203ENST00000445140 KRT86O43790 486 aa9.19□□□□□ -0.94
FXR1-203ENST00000445140 TADA3O75528 432 aa9.19□□□□□ -0.94
FXR1-203ENST00000445140 OAS1P00973 400 aaKnown RBP9.19□□□□□ -0.94
FXR1-203ENST00000445140 IGLV3-27P01718 113 aa9.19□□□□□ -0.94
FXR1-203ENST00000445140 LRG1P02750 347 aa9.19□□□□□ -0.94
FXR1-203ENST00000445140 PTPN2P17706 415 aa9.19□□□□□ -0.94
FXR1-203ENST00000445140 HTR7P34969 479 aa9.19□□□□□ -0.94
FXR1-203ENST00000445140 NOS2P35228 1153 aa9.19□□□□□ -0.94
FXR1-203ENST00000445140 MATKP42679 507 aa9.19□□□□□ -0.94
FXR1-203ENST00000445140 ZNF143P52747 638 aaPredicted RBP9.19□□□□□ -0.94
FXR1-203ENST00000445140 ADIGQ0VDE8 80 aa9.19□□□□□ -0.94
FXR1-203ENST00000445140 PIGHQ14442 188 aaPredicted RBP9.19□□□□□ -0.94
FXR1-203ENST00000445140 MTF1Q14872 753 aa9.19□□□□□ -0.94
FXR1-203ENST00000445140 MGAT5BQ3V5L5 792 aa9.19□□□□□ -0.94
FXR1-203ENST00000445140 REXO1L1PQ8IX06 675 aa9.19□□□□□ -0.94
FXR1-203ENST00000445140 FEZF2Q8TBJ5 459 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms