RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 IQCDQ96DY2 449 aa12.89□□□□□ -0.35
LTBR-204ENST00000444814 ERGIC2Q96RQ1 377 aa12.89□□□□□ -0.35
LTBR-204ENST00000444814 FUCA2Q9BTY2 467 aa12.89□□□□□ -0.35
LTBR-204ENST00000444814 CHORDC1Q9UHD1 332 aaPredicted RBP12.89□□□□□ -0.35
LTBR-204ENST00000444814 DNMT3LQ9UJW3 386 aa12.89□□□□□ -0.35
LTBR-204ENST00000444814 HHLA1C9JL84 531 aa12.88□□□□□ -0.35
LTBR-204ENST00000444814 TLR5O60602 858 aa12.88□□□□□ -0.35
LTBR-204ENST00000444814 OAS1P00973 400 aaKnown RBP12.88□□□□□ -0.35
LTBR-204ENST00000444814 ZDHHC11BP0C7U3 371 aa12.88□□□□□ -0.35
LTBR-204ENST00000444814 STAT1P42224 750 aa12.88□□□□□ -0.35
LTBR-204ENST00000444814 MAGEA9P43362 315 aa12.88□□□□□ -0.35
LTBR-204ENST00000444814 CLCN5P51795 746 aa12.88□□□□□ -0.35
LTBR-204ENST00000444814 MTF1Q14872 753 aa12.88□□□□□ -0.35
LTBR-204ENST00000444814 RAB41Q5JT25 222 aa12.88□□□□□ -0.35
LTBR-204ENST00000444814 BTBD8Q5XKL5 378 aa12.88□□□□□ -0.35
LTBR-204ENST00000444814 ZNF852Q6ZMS4 543 aa12.88□□□□□ -0.35
LTBR-204ENST00000444814 TTC30AQ86WT1 665 aa12.88□□□□□ -0.35
LTBR-204ENST00000444814 ZNF677Q86XU0 584 aa12.88□□□□□ -0.35
LTBR-204ENST00000444814 DHX40Q8IX18 779 aaKnown RBP12.88□□□□□ -0.35
LTBR-204ENST00000444814 UBA3Q8TBC4 463 aa12.88□□□□□ -0.35
LTBR-204ENST00000444814 SH3RF2Q8TEC5 729 aa12.88□□□□□ -0.35
LTBR-204ENST00000444814 SECISBP2LQ93073 1101 aaKnown RBP12.88□□□□□ -0.35
LTBR-204ENST00000444814 TSPY26PQ9H489 355 aa12.88□□□□□ -0.35
LTBR-204ENST00000444814 SIX2Q9NPC8 291 aa12.88□□□□□ -0.35
LTBR-204ENST00000444814 ST7Q9NRC1 585 aa12.88□□□□□ -0.35
LTBR-204ENST00000444814 TMEM30AQ9NV96 361 aa12.88□□□□□ -0.35
LTBR-204ENST00000444814 CA14Q9ULX7 337 aa12.88□□□□□ -0.35
LTBR-204ENST00000444814 HCN4Q9Y3Q4 1203 aa12.88□□□□□ -0.35
LTBR-204ENST00000444814 USP3Q9Y6I4 520 aa12.88□□□□□ -0.35
LTBR-204ENST00000444814 C2orf78A6NCI8 922 aa12.87□□□□□ -0.35
LTBR-204ENST00000444814 NARSO43776 548 aaKnown RBP12.87□□□□□ -0.35
LTBR-204ENST00000444814 PRAMEF12O95522 483 aa12.87□□□□□ -0.35
LTBR-204ENST00000444814 NFATC1O95644 943 aa12.87□□□□□ -0.35
LTBR-204ENST00000444814 OLFM2O95897 454 aa12.87□□□□□ -0.35
LTBR-204ENST00000444814 DEKP35659 375 aaKnown RBP12.87□□□□□ -0.35
LTBR-204ENST00000444814 POLR2FP61218 127 aaKnown RBP12.87□□□□□ -0.35
LTBR-204ENST00000444814 YWHAGP61981 247 aaKnown RBP eCLIP12.87□□□□□ -0.35
LTBR-204ENST00000444814 COG7P83436 770 aa12.87□□□□□ -0.35
LTBR-204ENST00000444814 ADIGQ0VDE8 80 aa12.87□□□□□ -0.35
LTBR-204ENST00000444814 USP4Q13107 963 aa12.87□□□□□ -0.35
LTBR-204ENST00000444814 ITPRIPL2Q3MIP1 535 aa12.87□□□□□ -0.35
LTBR-204ENST00000444814 PREPLQ4J6C6 727 aaPredicted RBP12.87□□□□□ -0.35
LTBR-204ENST00000444814 C10orf120Q5SQS8 335 aa12.87□□□□□ -0.35
LTBR-204ENST00000444814 GJB7Q6PEY0 223 aa12.87□□□□□ -0.35
LTBR-204ENST00000444814 FAM71AQ8IYT1 594 aa12.87□□□□□ -0.35
LTBR-204ENST00000444814 TTC16Q8NEE8 873 aa12.87□□□□□ -0.35
LTBR-204ENST00000444814 CCDC26Q8TAB7 109 aa12.87□□□□□ -0.35
LTBR-204ENST00000444814 SLC35F5Q8WV83 523 aa12.87□□□□□ -0.35
LTBR-204ENST00000444814 TFAP2BQ92481 460 aa12.87□□□□□ -0.35
LTBR-204ENST00000444814 KHSRPQ92945 711 aaKnown RBP eCLIP12.87□□□□□ -0.35
LTBR-204ENST00000444814 ASIC4Q96FT7 647 aa12.87□□□□□ -0.35
LTBR-204ENST00000444814 RPP25Q9BUL9 199 aaKnown RBP12.87□□□□□ -0.35
LTBR-204ENST00000444814 IRF2BPLQ9H1B7 796 aa12.87□□□□□ -0.35
LTBR-204ENST00000444814 LHX5Q9H2C1 402 aa12.87□□□□□ -0.35
LTBR-204ENST00000444814 SYNCQ9H7C4 482 aa12.87□□□□□ -0.35
LTBR-204ENST00000444814 CBX8Q9HC52 389 aa12.87□□□□□ -0.35
LTBR-204ENST00000444814 ABCC13Q9NSE7 274 aa12.87□□□□□ -0.35
LTBR-204ENST00000444814 FAM207AQ9NSI2 230 aaPredicted RBP12.87□□□□□ -0.35
LTBR-204ENST00000444814 TMEM51Q9NW97 253 aa12.87□□□□□ -0.35
LTBR-204ENST00000444814 DUS2Q9NX74 493 aaKnown RBP12.87□□□□□ -0.35
LTBR-204ENST00000444814 PCDHGC3Q9UN70 934 aa12.87□□□□□ -0.35
LTBR-204ENST00000444814 ZNF510Q9Y2H8 683 aa12.87□□□□□ -0.35
LTBR-204ENST00000444814 CPQQ9Y646 472 aa12.87□□□□□ -0.35
LTBR-204ENST00000444814 E2F8A0AVK6 867 aa12.86□□□□□ -0.35
LTBR-204ENST00000444814 F8VZ95 297 aa12.86□□□□□ -0.35
LTBR-204ENST00000444814 RNF225M0QZC1 329 aaPredicted RBP12.86□□□□□ -0.35
LTBR-204ENST00000444814 FOXN3O00409 490 aaPredicted RBP12.86□□□□□ -0.35
LTBR-204ENST00000444814 CYP26A1O43174 497 aa12.86□□□□□ -0.35
LTBR-204ENST00000444814 COCHO43405 550 aa12.86□□□□□ -0.35
LTBR-204ENST00000444814 CBFA2T2O43439 604 aa12.86□□□□□ -0.35
LTBR-204ENST00000444814 RARGP13631 454 aa12.86□□□□□ -0.35
LTBR-204ENST00000444814 KCNMA1Q12791 1236 aa12.86□□□□□ -0.35
LTBR-204ENST00000444814 PKDCCQ504Y2 493 aa12.86□□□□□ -0.35
LTBR-204ENST00000444814 PM20D1Q6GTS8 502 aa12.86□□□□□ -0.35
LTBR-204ENST00000444814 ASTLQ6HA08 431 aaPredicted RBP12.86□□□□□ -0.35
LTBR-204ENST00000444814 PPP1R2P3Q6NXS1 205 aa12.86□□□□□ -0.35
LTBR-204ENST00000444814 RALGPS2Q86X27 583 aaPredicted RBP12.86□□□□□ -0.35
LTBR-204ENST00000444814 TMEM35BQ8NCS4 154 aa12.86□□□□□ -0.35
LTBR-204ENST00000444814 FLCNQ8NFG4 579 aa12.86□□□□□ -0.35
LTBR-204ENST00000444814 OSCP1Q8WVF1 389 aa12.86□□□□□ -0.35
LTBR-204ENST00000444814 LRFN3Q9BTN0 628 aa12.86□□□□□ -0.35
LTBR-204ENST00000444814 NUP58Q9BVL2 599 aa12.86□□□□□ -0.35
LTBR-204ENST00000444814 OSBPL6Q9BZF3 934 aa12.86□□□□□ -0.35
LTBR-204ENST00000444814 PLA2G2FQ9BZM2 168 aa12.86□□□□□ -0.35
LTBR-204ENST00000444814 DCLK3Q9C098 648 aa12.86□□□□□ -0.35
LTBR-204ENST00000444814 KCNH6Q9H252 994 aa12.86□□□□□ -0.35
LTBR-204ENST00000444814 MYO6Q9UM54 1294 aa12.86□□□□□ -0.35
LTBR-204ENST00000444814 FHOD1Q9Y613 1164 aa12.86□□□□□ -0.35
LTBR-204ENST00000444814 PTPRDP23468 1912 aa12.86□□□□□ -0.35
LTBR-204ENST00000444814 A0A1W2PQC6 194 aa12.86□□□□□ -0.35
LTBR-204ENST00000444814 A0A1W2PQH9 124 aa12.86□□□□□ -0.35
LTBR-204ENST00000444814 LEFTY2O00292 366 aa12.86□□□□□ -0.35
LTBR-204ENST00000444814 LSM8O95777 96 aaKnown RBP12.86□□□□□ -0.35
LTBR-204ENST00000444814 LCP1P13796 627 aa12.86□□□□□ -0.35
LTBR-204ENST00000444814 SOX5P35711 763 aa12.86□□□□□ -0.35
LTBR-204ENST00000444814 STARD6P59095 220 aa12.86□□□□□ -0.35
LTBR-204ENST00000444814 RUNX3Q13761 415 aa12.86□□□□□ -0.35
LTBR-204ENST00000444814 LRRC32Q14392 662 aa12.86□□□□□ -0.35
LTBR-204ENST00000444814 IQCB1Q15051 598 aa12.86□□□□□ -0.35
LTBR-204ENST00000444814 ZNF77Q15935 545 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms