RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 CCDC192P0DO97 292 aa14.81□□□□□ -0.04
TREX1-202ENST00000444177 YWHAQP27348 245 aa14.81□□□□□ -0.04
TREX1-202ENST00000444177 SLC7A9P82251 487 aa14.81□□□□□ -0.04
TREX1-202ENST00000444177 CETN1Q12798 172 aa14.81□□□□□ -0.04
TREX1-202ENST00000444177 CUL2Q13617 745 aa14.81□□□□□ -0.04
TREX1-202ENST00000444177 DGLUCYQ7Z3D6 616 aa14.81□□□□□ -0.04
TREX1-202ENST00000444177 WDR5BQ86VZ2 330 aa14.81□□□□□ -0.04
TREX1-202ENST00000444177 TTC39CQ8N584 583 aa14.81□□□□□ -0.04
TREX1-202ENST00000444177 MLKLQ8NB16 471 aa14.81□□□□□ -0.04
TREX1-202ENST00000444177 WHAMMQ8TF30 809 aa14.81□□□□□ -0.04
TREX1-202ENST00000444177 FBXO32Q969P5 355 aa14.81□□□□□ -0.04
TREX1-202ENST00000444177 JAKMIP2Q96AA8 810 aa14.81□□□□□ -0.04
TREX1-202ENST00000444177 CYFIP2Q96F07 1278 aa14.81□□□□□ -0.04
TREX1-202ENST00000444177 SMOQ99835 787 aa14.81□□□□□ -0.04
TREX1-202ENST00000444177 POLR3BQ9NW08 1133 aaPredicted RBP14.81□□□□□ -0.04
TREX1-202ENST00000444177 USP18Q9UMW8 372 aa14.81□□□□□ -0.04
TREX1-202ENST00000444177 SLC8A2Q9UPR5 921 aa14.81□□□□□ -0.04
TREX1-202ENST00000444177 PRR5-ARHGAP8B1AHC4 643 aa14.8□□□□□ -0.04
TREX1-202ENST00000444177 BEST1O76090 585 aa14.8□□□□□ -0.04
TREX1-202ENST00000444177 OLFM2O95897 454 aa14.8□□□□□ -0.04
TREX1-202ENST00000444177 OAS1P00973 400 aaKnown RBP14.8□□□□□ -0.04
TREX1-202ENST00000444177 PXNP49023 591 aaPredicted RBP14.8□□□□□ -0.04
TREX1-202ENST00000444177 MARSP56192 900 aaKnown RBP14.8□□□□□ -0.04
TREX1-202ENST00000444177 ARHGAP8P85298 464 aa14.8□□□□□ -0.04
TREX1-202ENST00000444177 LMNB2Q03252 620 aa14.8□□□□□ -0.04
TREX1-202ENST00000444177 SPEM2Q0P670 501 aa14.8□□□□□ -0.04
TREX1-202ENST00000444177 TPD52L1Q16890 204 aaPredicted RBP14.8□□□□□ -0.04
TREX1-202ENST00000444177 FBXO43Q4G163 708 aa14.8□□□□□ -0.04
TREX1-202ENST00000444177 CLEC20AQ6ZU45 233 aa14.8□□□□□ -0.04
TREX1-202ENST00000444177 CREBRFQ8IUR6 639 aa14.8□□□□□ -0.04
TREX1-202ENST00000444177 TRIM59Q8IWR1 403 aa14.8□□□□□ -0.04
TREX1-202ENST00000444177 ADGRG2Q8IZP9 1017 aa14.8□□□□□ -0.04
TREX1-202ENST00000444177 KIAA1958Q8N8K9 716 aa14.8□□□□□ -0.04
TREX1-202ENST00000444177 PDZD8Q8NEN9 1154 aa14.8□□□□□ -0.04
TREX1-202ENST00000444177 ZMIZ2Q8NF64 920 aa14.8□□□□□ -0.04
TREX1-202ENST00000444177 SCAMP5Q8TAC9 235 aa14.8□□□□□ -0.04
TREX1-202ENST00000444177 EZH1Q92800 747 aaPredicted RBP14.8□□□□□ -0.04
TREX1-202ENST00000444177 CD101Q93033 1021 aa14.8□□□□□ -0.04
TREX1-202ENST00000444177 TMEM176AQ96HP8 235 aa14.8□□□□□ -0.04
TREX1-202ENST00000444177 CNOT6LQ96LI5 555 aaKnown RBP14.8□□□□□ -0.04
TREX1-202ENST00000444177 HEXIM2Q96MH2 286 aaKnown RBP14.8□□□□□ -0.04
TREX1-202ENST00000444177 NT5C1BQ96P26 610 aa14.8□□□□□ -0.04
TREX1-202ENST00000444177 HNRNPABQ99729 332 aaKnown RBP14.8□□□□□ -0.04
TREX1-202ENST00000444177 CHORDC1Q9UHD1 332 aaPredicted RBP14.8□□□□□ -0.04
TREX1-202ENST00000444177 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.8□□□□□ -0.04
TREX1-202ENST00000444177 CPQQ9Y646 472 aa14.8□□□□□ -0.04
TREX1-202ENST00000444177 MYO16Q9Y6X6 1858 aa14.8□□□□□ -0.04
TREX1-202ENST00000444177 HELZP42694 1942 aaKnown RBP14.8□□□□□ -0.04
TREX1-202ENST00000444177 CCDC163A0A0D9SF12 145 aa14.79□□□□□ -0.04
TREX1-202ENST00000444177 TNFRSF10BO14763 440 aa14.79□□□□□ -0.04
TREX1-202ENST00000444177 NFATC1O95644 943 aa14.79□□□□□ -0.04
TREX1-202ENST00000444177 AFPP02771 609 aaKnown RBP14.79□□□□□ -0.04
TREX1-202ENST00000444177 SDHBP21912 280 aa14.79□□□□□ -0.04
TREX1-202ENST00000444177 TBXAS1P24557 533 aaPredicted RBP14.79□□□□□ -0.04
TREX1-202ENST00000444177 RAD23BP54727 409 aa14.79□□□□□ -0.04
TREX1-202ENST00000444177 YWHAEP62258 255 aaKnown RBP14.79□□□□□ -0.04
TREX1-202ENST00000444177 KCNH2Q12809 1159 aa14.79□□□□□ -0.04
TREX1-202ENST00000444177 DPCR1Q3MIW9 517 aa14.79□□□□□ -0.04
TREX1-202ENST00000444177 PPP1R26Q5T8A7 1209 aaPredicted RBP14.79□□□□□ -0.04
TREX1-202ENST00000444177 CEP68Q76N32 757 aa14.79□□□□□ -0.04
TREX1-202ENST00000444177 PPM1KQ8N3J5 372 aa14.79□□□□□ -0.04
TREX1-202ENST00000444177 SLC4A11Q8NBS3 891 aa14.79□□□□□ -0.04
TREX1-202ENST00000444177 OVCA2Q8WZ82 227 aa14.79□□□□□ -0.04
TREX1-202ENST00000444177 CSNK1G1Q9HCP0 422 aa14.79□□□□□ -0.04
TREX1-202ENST00000444177 SMPD4Q9NXE4 827 aa14.79□□□□□ -0.04
TREX1-202ENST00000444177 IL37Q9NZH6 218 aa14.79□□□□□ -0.04
TREX1-202ENST00000444177 GMIPQ9P107 970 aa14.79□□□□□ -0.04
TREX1-202ENST00000444177 DACH1Q9UI36 760 aa14.79□□□□□ -0.04
TREX1-202ENST00000444177 CNOT1A5YKK6 2376 aaKnown RBP14.78□□□□□ -0.04
TREX1-202ENST00000444177 P4HA2O15460 535 aa14.78□□□□□ -0.04
TREX1-202ENST00000444177 LRP3O75074 770 aa14.78□□□□□ -0.04
TREX1-202ENST00000444177 MBL2P11226 248 aaPredicted RBP14.78□□□□□ -0.04
TREX1-202ENST00000444177 GAB4Q2WGN9 574 aa14.78□□□□□ -0.04
TREX1-202ENST00000444177 RBM43Q6ZSC3 357 aaKnown RBP14.78□□□□□ -0.04
TREX1-202ENST00000444177 GPRIN1Q7Z2K8 1008 aa14.78□□□□□ -0.04
TREX1-202ENST00000444177 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.78□□□□□ -0.04
TREX1-202ENST00000444177 CAMKK1Q8N5S9 505 aa14.78□□□□□ -0.04
TREX1-202ENST00000444177 FAM160A2Q8N612 972 aaPredicted RBP14.78□□□□□ -0.04
TREX1-202ENST00000444177 RPLP0P6Q8NHW5 317 aa14.78□□□□□ -0.04
TREX1-202ENST00000444177 FBXO44Q9H4M3 255 aa14.78□□□□□ -0.04
TREX1-202ENST00000444177 FAM124BQ9H5Z6 455 aaPredicted RBP14.78□□□□□ -0.04
TREX1-202ENST00000444177 COMMD8Q9NX08 183 aa14.78□□□□□ -0.04
TREX1-202ENST00000444177 CFAP97Q9P2B7 532 aa14.78□□□□□ -0.04
TREX1-202ENST00000444177 TPRP12270 2363 aaKnown RBP14.78□□□□□ -0.04
TREX1-202ENST00000444177 MYH10P35580 1976 aa14.78□□□□□ -0.04
TREX1-202ENST00000444177 SLC9A3R1O14745 358 aaPredicted RBP14.77□□□□□ -0.05
TREX1-202ENST00000444177 PMM2O15305 246 aa14.77□□□□□ -0.05
TREX1-202ENST00000444177 RPP40O75818 363 aaKnown RBP14.77□□□□□ -0.05
TREX1-202ENST00000444177 CD19P15391 556 aa14.77□□□□□ -0.05
TREX1-202ENST00000444177 ACO1P21399 889 aaKnown RBP14.77□□□□□ -0.05
TREX1-202ENST00000444177 OPRD1P41143 372 aa14.77□□□□□ -0.05
TREX1-202ENST00000444177 ATXN1P54253 815 aaKnown RBP14.77□□□□□ -0.05
TREX1-202ENST00000444177 DHCR24Q15392 516 aa14.77□□□□□ -0.05
TREX1-202ENST00000444177 GOLGA7BQ2TAP0 167 aa14.77□□□□□ -0.05
TREX1-202ENST00000444177 HECTD3Q5T447 861 aa14.77□□□□□ -0.05
TREX1-202ENST00000444177 SNX30Q5VWJ9 437 aa14.77□□□□□ -0.05
TREX1-202ENST00000444177 SYT13Q7L8C5 426 aa14.77□□□□□ -0.05
TREX1-202ENST00000444177 GAB3Q8WWW8 586 aa14.77□□□□□ -0.05
TREX1-202ENST00000444177 MED15Q96RN5 788 aa14.77□□□□□ -0.05
TREX1-202ENST00000444177 NACA2Q9H009 215 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms