RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 ATP13A4Q4VNC1 1196 aa23.19■■□□□ 1.3
CTDSPL-206ENST00000443503 SYT15Q9BQS2 421 aa23.19■■□□□ 1.3
CTDSPL-206ENST00000443503 SAE1Q9UBE0 346 aaPredicted RBP23.19■■□□□ 1.3
CTDSPL-206ENST00000443503 KNDC1Q76NI1 1749 aa23.19■■□□□ 1.3
CTDSPL-206ENST00000443503 HMOX2P30519 316 aa23.19■■□□□ 1.3
CTDSPL-206ENST00000443503 FCGRTP55899 365 aa23.19■■□□□ 1.3
CTDSPL-206ENST00000443503 CAPSQ13938 189 aa23.19■■□□□ 1.3
CTDSPL-206ENST00000443503 SNX17Q15036 470 aa23.19■■□□□ 1.3
CTDSPL-206ENST00000443503 PRELID2Q8N945 189 aa23.19■■□□□ 1.3
CTDSPL-206ENST00000443503 NOD2Q9HC29 1040 aa23.19■■□□□ 1.3
CTDSPL-206ENST00000443503 CYBBP04839 570 aa23.19■■□□□ 1.3
CTDSPL-206ENST00000443503 HARS2P49590 506 aaKnown RBP23.19■■□□□ 1.3
CTDSPL-206ENST00000443503 MARSP56192 900 aaKnown RBP23.19■■□□□ 1.3
CTDSPL-206ENST00000443503 ERMARDQ5T6L9 678 aa23.19■■□□□ 1.3
CTDSPL-206ENST00000443503 SZRD1Q7Z422 152 aa23.19■■□□□ 1.3
CTDSPL-206ENST00000443503 COLGALT1Q8NBJ5 622 aa23.19■■□□□ 1.3
CTDSPL-206ENST00000443503 TCN1P20061 433 aaPredicted RBP23.18■■□□□ 1.3
CTDSPL-206ENST00000443503 SLC2A14Q8TDB8 520 aa23.18■■□□□ 1.3
CTDSPL-206ENST00000443503 HSD3B7Q9H2F3 369 aa23.18■■□□□ 1.3
CTDSPL-206ENST00000443503 DDX20Q9UHI6 824 aaKnown RBP23.18■■□□□ 1.3
CTDSPL-206ENST00000443503 LTN1O94822 1766 aa23.18■■□□□ 1.3
CTDSPL-206ENST00000443503 NKRFO15226 690 aaKnown RBP eCLIP23.18■■□□□ 1.32e-7■■■□□ 19
CTDSPL-206ENST00000443503 SLC2A3P11169 496 aa23.18■■□□□ 1.3
CTDSPL-206ENST00000443503 LHX1P48742 406 aa23.18■■□□□ 1.3
CTDSPL-206ENST00000443503 PTK6Q13882 451 aa23.18■■□□□ 1.3
CTDSPL-206ENST00000443503 KATNAL2Q8IYT4 538 aa23.18■■□□□ 1.3
CTDSPL-206ENST00000443503 NRBF2Q96F24 287 aa23.18■■□□□ 1.3
CTDSPL-206ENST00000443503 YWHAZP63104 245 aaKnown RBP23.18■■□□□ 1.3
CTDSPL-206ENST00000443503 BLOC1S5Q8TDH9 187 aa23.18■■□□□ 1.3
CTDSPL-206ENST00000443503 CASZ1Q86V15 1759 aa23.18■■□□□ 1.3
CTDSPL-206ENST00000443503 FBXO21O94952 628 aa23.18■■□□□ 1.3
CTDSPL-206ENST00000443503 AMPD1P23109 780 aa23.18■■□□□ 1.3
CTDSPL-206ENST00000443503 MAMLD1Q13495 774 aa23.18■■□□□ 1.3
CTDSPL-206ENST00000443503 LAMB3Q13751 1172 aa23.18■■□□□ 1.3
CTDSPL-206ENST00000443503 DENND1BQ6P3S1 775 aa23.18■■□□□ 1.3
CTDSPL-206ENST00000443503 STKLD1Q8NE28 680 aa23.18■■□□□ 1.3
CTDSPL-206ENST00000443503 PGM2Q96G03 612 aa23.18■■□□□ 1.3
CTDSPL-206ENST00000443503 ADAMTS3O15072 1205 aa23.17■■□□□ 1.3
CTDSPL-206ENST00000443503 ESRRBO95718 433 aa23.17■■□□□ 1.3
CTDSPL-206ENST00000443503 HMGCRP04035 888 aa23.17■■□□□ 1.3
CTDSPL-206ENST00000443503 GLRBP48167 497 aa23.17■■□□□ 1.3
CTDSPL-206ENST00000443503 TRIP10Q15642 601 aa23.17■■□□□ 1.3
CTDSPL-206ENST00000443503 FOXR1Q6PIV2 292 aa23.17■■□□□ 1.3
CTDSPL-206ENST00000443503 ATP6V0D2Q8N8Y2 350 aa23.17■■□□□ 1.3
CTDSPL-206ENST00000443503 PIH1D1Q9NWS0 290 aaKnown RBP23.17■■□□□ 1.3
CTDSPL-206ENST00000443503 CDYLQ9Y232 598 aa23.17■■□□□ 1.3
CTDSPL-206ENST00000443503 AKAP12Q02952 1782 aa23.17■■□□□ 1.3
CTDSPL-206ENST00000443503 TNFSF9P41273 254 aa23.17■■□□□ 1.3
CTDSPL-206ENST00000443503 GEMP55040 296 aa23.17■■□□□ 1.3
CTDSPL-206ENST00000443503 SREBF2Q12772 1141 aa23.17■■□□□ 1.3
CTDSPL-206ENST00000443503 TTC23LQ6PF05 361 aa23.17■■□□□ 1.3
CTDSPL-206ENST00000443503 KCNK1O00180 336 aa23.17■■□□□ 1.3
CTDSPL-206ENST00000443503 POMCP01189 267 aa23.17■■□□□ 1.3
CTDSPL-206ENST00000443503 FAM83EQ2M2I3 478 aa23.17■■□□□ 1.3
CTDSPL-206ENST00000443503 TTMPQ5BVD1 217 aa23.17■■□□□ 1.3
CTDSPL-206ENST00000443503 DAB2IPQ5VWQ8 1189 aa23.17■■□□□ 1.3
CTDSPL-206ENST00000443503 KIAA0319LQ8IZA0 1049 aa23.17■■□□□ 1.3
CTDSPL-206ENST00000443503 PPP1R13LQ8WUF5 828 aa23.17■■□□□ 1.3
CTDSPL-206ENST00000443503 FBXO32Q969P5 355 aa23.17■■□□□ 1.3
CTDSPL-206ENST00000443503 PYGLP06737 847 aa23.17■■□□□ 1.3
CTDSPL-206ENST00000443503 CELF3Q5SZQ8 465 aaKnown RBP23.17■■□□□ 1.3
CTDSPL-206ENST00000443503 THEMIS2Q5TEJ8 643 aa23.17■■□□□ 1.3
CTDSPL-206ENST00000443503 CAPRIN2Q6IMN6 1127 aaKnown RBP23.17■■□□□ 1.3
CTDSPL-206ENST00000443503 SH3BP5LQ7L8J4 393 aa23.17■■□□□ 1.3
CTDSPL-206ENST00000443503 ALG3Q92685 438 aa23.17■■□□□ 1.3
CTDSPL-206ENST00000443503 ILKAPQ9H0C8 392 aaPredicted RBP23.17■■□□□ 1.3
CTDSPL-206ENST00000443503 CHST12Q9NRB3 414 aa23.17■■□□□ 1.3
CTDSPL-206ENST00000443503 AVPR1AP37288 418 aa23.16■■□□□ 1.3
CTDSPL-206ENST00000443503 ARHGDIAP52565 204 aa23.16■■□□□ 1.3
CTDSPL-206ENST00000443503 EIF1ADQ8N9N8 165 aaKnown RBP23.16■■□□□ 1.3
CTDSPL-206ENST00000443503 ADAM32Q8TC27 787 aa23.16■■□□□ 1.3
CTDSPL-206ENST00000443503 WARS2Q9UGM6 360 aaKnown RBP23.16■■□□□ 1.3
CTDSPL-206ENST00000443503 PDE4DIPQ5VU43 2346 aa23.16■■□□□ 1.3
CTDSPL-206ENST00000443503 BTNL10A8MVZ5 291 aa23.16■■□□□ 1.3
CTDSPL-206ENST00000443503 MGEA5O60502 916 aa23.16■■□□□ 1.3
CTDSPL-206ENST00000443503 RECQL4O94761 1208 aa23.16■■□□□ 1.3
CTDSPL-206ENST00000443503 CYP1A2P05177 515 aa23.16■■□□□ 1.3
CTDSPL-206ENST00000443503 BGNP21810 368 aa23.16■■□□□ 1.3
CTDSPL-206ENST00000443503 HGSNATQ68CP4 663 aa23.16■■□□□ 1.3
CTDSPL-206ENST00000443503 TLK2Q86UE8 772 aa23.16■■□□□ 1.3
CTDSPL-206ENST00000443503 HES6Q96HZ4 224 aa23.16■■□□□ 1.3
CTDSPL-206ENST00000443503 CELF6Q96J87 481 aaKnown RBP23.16■■□□□ 1.3
CTDSPL-206ENST00000443503 SYF2O95926 243 aaKnown RBP23.16■■□□□ 1.3
CTDSPL-206ENST00000443503 NQO1P15559 274 aaKnown RBP23.16■■□□□ 1.3
CTDSPL-206ENST00000443503 GJC2Q5T442 439 aaPredicted RBP23.16■■□□□ 1.3
CTDSPL-206ENST00000443503 LAYNQ6UX15 382 aa23.16■■□□□ 1.3
CTDSPL-206ENST00000443503 STRA8Q7Z7C7 330 aa23.16■■□□□ 1.3
CTDSPL-206ENST00000443503 DEFB106AQ8N104 65 aa23.16■■□□□ 1.3
CTDSPL-206ENST00000443503 NUP93Q8N1F7 819 aa23.16■■□□□ 1.3
CTDSPL-206ENST00000443503 GPR63Q9BZJ6 419 aa23.16■■□□□ 1.3
CTDSPL-206ENST00000443503 CASS4Q9NQ75 786 aa23.16■■□□□ 1.3
CTDSPL-206ENST00000443503 IARS2Q9NSE4 1012 aaKnown RBP23.16■■□□□ 1.3
CTDSPL-206ENST00000443503 AAR2Q9Y312 384 aaKnown RBP23.16■■□□□ 1.3
CTDSPL-206ENST00000443503 SUPT3HB4E1H0 165 aa23.15■■□□□ 1.3
CTDSPL-206ENST00000443503 TIMM44O43615 452 aa23.15■■□□□ 1.3
CTDSPL-206ENST00000443503 SUPT3HO75486 399 aa23.15■■□□□ 1.3
CTDSPL-206ENST00000443503 NFICP08651 508 aa23.15■■□□□ 1.3
CTDSPL-206ENST00000443503 IL10P22301 178 aa23.15■■□□□ 1.3
CTDSPL-206ENST00000443503 PKN2Q16513 984 aaKnown RBP23.15■■□□□ 1.3
CTDSPL-206ENST00000443503 RNF217Q8TC41 542 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms