RNA–Protein interactions for RNA: ENST00000443187.1

PRKD3-203, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-203ENST00000443187 TMEM196Q5HYL7 178 aa11.8□□□□□ -0.52
PRKD3-203ENST00000443187 RAB41Q5JT25 222 aa11.8□□□□□ -0.52
PRKD3-203ENST00000443187 HECTD3Q5T447 861 aa11.8□□□□□ -0.52
PRKD3-203ENST00000443187 CC2D1AQ6P1N0 951 aaPredicted RBP11.8□□□□□ -0.52
PRKD3-203ENST00000443187 TMEM270Q6UE05 265 aa11.8□□□□□ -0.52
PRKD3-203ENST00000443187 RBM43Q6ZSC3 357 aaKnown RBP11.8□□□□□ -0.52
PRKD3-203ENST00000443187 ASCL5Q7RTU5 278 aa11.8□□□□□ -0.52
PRKD3-203ENST00000443187 TTC39CQ8N584 583 aa11.8□□□□□ -0.52
PRKD3-203ENST00000443187 ANKRD52Q8NB46 1076 aa11.8□□□□□ -0.52
PRKD3-203ENST00000443187 UBA3Q8TBC4 463 aa11.8□□□□□ -0.52
PRKD3-203ENST00000443187 MSANTD3Q96H12 275 aa11.8□□□□□ -0.52
PRKD3-203ENST00000443187 FBXO44Q9H4M3 255 aa11.8□□□□□ -0.52
PRKD3-203ENST00000443187 FAM124BQ9H5Z6 455 aaPredicted RBP11.8□□□□□ -0.52
PRKD3-203ENST00000443187 CYLDQ9NQC7 956 aa11.8□□□□□ -0.52
PRKD3-203ENST00000443187 PRMT8Q9NR22 394 aaPredicted RBP11.8□□□□□ -0.52
PRKD3-203ENST00000443187 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.8□□□□□ -0.52
PRKD3-203ENST00000443187 POLR3BQ9NW08 1133 aaPredicted RBP11.8□□□□□ -0.52
PRKD3-203ENST00000443187 AJAP1Q9UKB5 411 aaPredicted RBP11.8□□□□□ -0.52
PRKD3-203ENST00000443187 PCDHB4Q9Y5E5 795 aa11.8□□□□□ -0.52
PRKD3-203ENST00000443187 TRDMT1O14717 391 aaKnown RBP11.79□□□□□ -0.52
PRKD3-203ENST00000443187 EGFP01133 1207 aa11.79□□□□□ -0.52
PRKD3-203ENST00000443187 CYP17A1P05093 508 aa11.79□□□□□ -0.52
PRKD3-203ENST00000443187 IRF1P10914 325 aa11.79□□□□□ -0.52
PRKD3-203ENST00000443187 CD19P15391 556 aa11.79□□□□□ -0.52
PRKD3-203ENST00000443187 TBXAS1P24557 533 aaPredicted RBP11.79□□□□□ -0.52
PRKD3-203ENST00000443187 BRD2P25440 801 aaKnown RBP11.79□□□□□ -0.52
PRKD3-203ENST00000443187 OPRD1P41143 372 aa11.79□□□□□ -0.52
PRKD3-203ENST00000443187 TUBP50607 506 aa11.79□□□□□ -0.52
PRKD3-203ENST00000443187 GALK1P51570 392 aa11.79□□□□□ -0.52
PRKD3-203ENST00000443187 SATB1Q01826 763 aa11.79□□□□□ -0.52
PRKD3-203ENST00000443187 GCNT1Q02742 428 aa11.79□□□□□ -0.52
PRKD3-203ENST00000443187 CSTF1Q05048 431 aaKnown RBP11.79□□□□□ -0.52
PRKD3-203ENST00000443187 SGO2Q562F6 1265 aa11.79□□□□□ -0.52
PRKD3-203ENST00000443187 MIIPQ5JXC2 388 aa11.79□□□□□ -0.52
PRKD3-203ENST00000443187 DPY19L2P1Q6NXN4 242 aa11.79□□□□□ -0.52
PRKD3-203ENST00000443187 RHBDF2Q6PJF5 856 aa11.79□□□□□ -0.52
PRKD3-203ENST00000443187 CCDC186Q7Z3E2 898 aa11.79□□□□□ -0.52
PRKD3-203ENST00000443187 CREBRFQ8IUR6 639 aa11.79□□□□□ -0.52
PRKD3-203ENST00000443187 SFTPA1Q8IWL2 248 aa11.79□□□□□ -0.52
PRKD3-203ENST00000443187 ADGRG2Q8IZP9 1017 aa11.79□□□□□ -0.52
PRKD3-203ENST00000443187 RBBP8NLQ8NC74 664 aaPredicted RBP11.79□□□□□ -0.52
PRKD3-203ENST00000443187 NELL1Q92832 810 aa11.79□□□□□ -0.52
PRKD3-203ENST00000443187 P2RY11Q96G91 374 aa11.79□□□□□ -0.52
PRKD3-203ENST00000443187 KLF16Q9BXK1 252 aaPredicted RBP11.79□□□□□ -0.52
PRKD3-203ENST00000443187 SIX2Q9NPC8 291 aa11.79□□□□□ -0.52
PRKD3-203ENST00000443187 ACP6Q9NPH0 428 aa11.79□□□□□ -0.52
PRKD3-203ENST00000443187 SAMSN1Q9NSI8 373 aaKnown RBP11.79□□□□□ -0.52
PRKD3-203ENST00000443187 CNTN6Q9UQ52 1028 aa11.79□□□□□ -0.52
PRKD3-203ENST00000443187 GPR179Q6PRD1 2367 aa11.79□□□□□ -0.52
PRKD3-203ENST00000443187 FANCMQ8IYD8 2048 aa11.79□□□□□ -0.52
PRKD3-203ENST00000443187 MYOFQ9NZM1 2061 aa11.79□□□□□ -0.52
PRKD3-203ENST00000443187 BECN2A8MW95 431 aa11.78□□□□□ -0.52
PRKD3-203ENST00000443187 NCAM2O15394 837 aa11.78□□□□□ -0.52
PRKD3-203ENST00000443187 LAMTOR5O43504 91 aa11.78□□□□□ -0.52
PRKD3-203ENST00000443187 VDRP11473 427 aa11.78□□□□□ -0.52
PRKD3-203ENST00000443187 RARGP13631 454 aa11.78□□□□□ -0.52
PRKD3-203ENST00000443187 MAGEA9P43362 315 aa11.78□□□□□ -0.52
PRKD3-203ENST00000443187 PDE6CP51160 858 aa11.78□□□□□ -0.52
PRKD3-203ENST00000443187 TKTL1P51854 596 aa11.78□□□□□ -0.52
PRKD3-203ENST00000443187 DMWDQ09019 674 aa11.78□□□□□ -0.52
PRKD3-203ENST00000443187 TRIM65Q6PJ69 517 aa11.78□□□□□ -0.52
PRKD3-203ENST00000443187 LCLAT1Q6UWP7 414 aa11.78□□□□□ -0.52
PRKD3-203ENST00000443187 C12orf40Q86WS4 652 aa11.78□□□□□ -0.52
PRKD3-203ENST00000443187 BBS7Q8IWZ6 715 aa11.78□□□□□ -0.52
PRKD3-203ENST00000443187 CPA6Q8N4T0 437 aa11.78□□□□□ -0.52
PRKD3-203ENST00000443187 ATP2A3Q93084 1043 aa11.78□□□□□ -0.52
PRKD3-203ENST00000443187 GBP4Q96PP9 640 aa11.78□□□□□ -0.52
PRKD3-203ENST00000443187 ULBP1Q9BZM6 244 aa11.78□□□□□ -0.52
PRKD3-203ENST00000443187 UBXN6Q9BZV1 441 aa11.78□□□□□ -0.52
PRKD3-203ENST00000443187 THAP9Q9H5L6 903 aa11.78□□□□□ -0.52
PRKD3-203ENST00000443187 TLR8Q9NR97 1041 aaKnown RBP11.78□□□□□ -0.52
PRKD3-203ENST00000443187 FBXO4Q9UKT5 387 aa11.78□□□□□ -0.52
PRKD3-203ENST00000443187 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.78□□□□□ -0.52
PRKD3-203ENST00000443187 CFAP54Q96N23 3096 aa11.78□□□□□ -0.52
PRKD3-203ENST00000443187 ATG2BQ96BY7 2078 aa11.77□□□□□ -0.52
PRKD3-203ENST00000443187 RIF1Q5UIP0 2472 aaKnown RBP11.77□□□□□ -0.53
PRKD3-203ENST00000443187 E2F8A0AVK6 867 aa11.77□□□□□ -0.53
PRKD3-203ENST00000443187 PRR23AA6NEV1 266 aa11.77□□□□□ -0.53
PRKD3-203ENST00000443187 K7ESF4 209 aa11.77□□□□□ -0.53
PRKD3-203ENST00000443187 PIK3R2O00459 728 aa11.77□□□□□ -0.53
PRKD3-203ENST00000443187 XPO1O14980 1071 aaKnown RBP11.77□□□□□ -0.53
PRKD3-203ENST00000443187 FGFR1OPO95684 399 aaKnown RBP11.77□□□□□ -0.53
PRKD3-203ENST00000443187 PAEPP09466 180 aa11.77□□□□□ -0.53
PRKD3-203ENST00000443187 CHRM1P11229 460 aaPredicted RBP11.77□□□□□ -0.53
PRKD3-203ENST00000443187 PON1P27169 355 aa11.77□□□□□ -0.53
PRKD3-203ENST00000443187 ERCC5P28715 1186 aaPredicted RBP11.77□□□□□ -0.53
PRKD3-203ENST00000443187 SLC6A11P48066 632 aa11.77□□□□□ -0.53
PRKD3-203ENST00000443187 RGS7P49802 495 aa11.77□□□□□ -0.53
PRKD3-203ENST00000443187 BCAT1P54687 386 aa11.77□□□□□ -0.53
PRKD3-203ENST00000443187 YWHAEP62258 255 aaKnown RBP11.77□□□□□ -0.53
PRKD3-203ENST00000443187 BST2Q10589 180 aaKnown RBP11.77□□□□□ -0.53
PRKD3-203ENST00000443187 DHCR24Q15392 516 aa11.77□□□□□ -0.53
PRKD3-203ENST00000443187 DGKKQ5KSL6 1271 aa11.77□□□□□ -0.53
PRKD3-203ENST00000443187 PM20D1Q6GTS8 502 aa11.77□□□□□ -0.53
PRKD3-203ENST00000443187 PMF1Q6P1K2 205 aa11.77□□□□□ -0.53
PRKD3-203ENST00000443187 MAMSTRQ6ZN01 415 aa11.77□□□□□ -0.53
PRKD3-203ENST00000443187 C11orf57Q6ZUT1 292 aaPredicted RBP11.77□□□□□ -0.53
PRKD3-203ENST00000443187 SLC35F5Q8WV83 523 aa11.77□□□□□ -0.53
PRKD3-203ENST00000443187 P2RY13Q9BPV8 354 aa11.77□□□□□ -0.53
PRKD3-203ENST00000443187 IRF2BPLQ9H1B7 796 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms