RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 RFWD3Q6PCD5 774 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 ERO1BQ86YB8 467 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 TDRD5Q8NAT2 981 aaKnown RBP10.65□□□□□ -0.7
LIN54-202ENST00000442461 MINDY2Q8NBR6 621 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 ETNPPLQ8TBG4 499 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 CHURC1Q8WUH1 139 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 ERLEC1Q96DZ1 483 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 NMUR2Q9GZQ4 415 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 NUAK2Q9H093 628 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 DHX35Q9H5Z1 703 aaKnown RBP10.65□□□□□ -0.7
LIN54-202ENST00000442461 WDR41Q9HAD4 459 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 TMEM260Q9NX78 707 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.65□□□□□ -0.7
LIN54-202ENST00000442461 GNPTGQ9UJJ9 305 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 NRXN1Q9ULB1 1477 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 PRPF19Q9UMS4 504 aaKnown RBP10.65□□□□□ -0.7
LIN54-202ENST00000442461 GABBR2O75899 941 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 ACAT1P24752 427 aaKnown RBP10.64□□□□□ -0.71
LIN54-202ENST00000442461 AGKQ53H12 422 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 NIPAL1Q6NVV3 410 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 HELQQ8TDG4 1101 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 DNAJC18Q9H819 358 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 PCDHB2Q9Y5E7 798 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 SAMD9LQ8IVG5 1584 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 A0A1B0GVG6 124 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 E2F8A0AVK6 867 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 BTNL10A8MVZ5 291 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 UBE2Q2LH0YL09 131 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 BTN3A3O00478 584 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 TSPAN4O14817 238 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 EPN2O95208 641 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 NMT1P30419 496 aaKnown RBP10.64□□□□□ -0.71
LIN54-202ENST00000442461 BST1Q10588 318 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 NCOA4Q13772 614 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 FAM47CQ5HY64 1035 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 PAGE2BQ5JRK9 111 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 CIAPIN1Q6FI81 312 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 FAM45BPQ6NSW5 357 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 LRRC8DQ7L1W4 858 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 STK32CQ86UX6 486 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 ENDOVQ8N8Q3 282 aaKnown RBP10.64□□□□□ -0.71
LIN54-202ENST00000442461 PRELID2Q8N945 189 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 FAM71DQ8N9W8 422 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 PHC3Q8NDX5 983 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 ZSWIM2Q8NEG5 633 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 PURBQ96QR8 312 aaKnown RBP10.64□□□□□ -0.71
LIN54-202ENST00000442461 ASAP1Q9ULH1 1129 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 ATP7BP35670 1465 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 ARPC4-TTLL3A0A0A6YYG9 625 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 BCAP31P51572 246 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 ZNF829Q3KNS6 432 aaPredicted RBP10.64□□□□□ -0.71
LIN54-202ENST00000442461 TBC1D25Q3MII6 688 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 TRIQKQ629K1 86 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 DENND5AQ6IQ26 1287 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 ACAD10Q6JQN1 1059 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 DNAJC10Q8IXB1 793 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 CPXCR1Q8N123 301 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 FAM162AQ96A26 154 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 CLPTM1LQ96KA5 538 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 PHF12Q96QT6 1004 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 TRIM8Q9BZR9 551 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 NEUROG2Q9H2A3 272 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 CPVLQ9H3G5 476 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 TRIM45Q9H8W5 580 aaPredicted RBP10.64□□□□□ -0.71
LIN54-202ENST00000442461 PCDH9Q9HC56 1237 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 PLK2Q9NYY3 685 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 PRR5-ARHGAP8B1AHC4 643 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 F5H423 210 aaPredicted RBP10.64□□□□□ -0.71
LIN54-202ENST00000442461 PSMD11O00231 422 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 APOL1O14791 398 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 INPP4BO15327 924 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 NOS1APO75052 506 aaPredicted RBP10.64□□□□□ -0.71
LIN54-202ENST00000442461 RGS20O76081 388 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 ABCB1P08183 1280 aaPredicted RBP10.64□□□□□ -0.71
LIN54-202ENST00000442461 USP17L8P0C7I0 530 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 ATP6V1B2P21281 511 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 SLC16A2P36021 539 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 ARPP19P56211 112 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 ARHGAP8P85298 464 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 VAC14Q08AM6 782 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 AP3B2Q13367 1082 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 DGCR6Q14129 220 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 TTC23Q5W5X9 447 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 PLEKHM3Q6ZWE6 761 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 SLCO6A1Q86UG4 719 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 AHI1Q8N157 1196 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 PGBD4Q96DM1 585 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 TMEM47Q9BQJ4 181 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 IMPAD1Q9NX62 359 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 KLHL3Q9UH77 587 aa10.64□□□□□ -0.71
LIN54-202ENST00000442461 KAT6BQ8WYB5 2073 aa10.63□□□□□ -0.71
LIN54-202ENST00000442461 A0A087X0B3 334 aa10.63□□□□□ -0.71
LIN54-202ENST00000442461 SLC26A4O43511 780 aa10.63□□□□□ -0.71
LIN54-202ENST00000442461 NMT2O60551 498 aa10.63□□□□□ -0.71
LIN54-202ENST00000442461 POLBP06746 335 aa10.63□□□□□ -0.71
LIN54-202ENST00000442461 SDC4P31431 198 aa10.63□□□□□ -0.71
LIN54-202ENST00000442461 TRAP1Q12931 704 aaKnown RBP10.63□□□□□ -0.71
LIN54-202ENST00000442461 BMPR2Q13873 1038 aa10.63□□□□□ -0.71
LIN54-202ENST00000442461 SCARF1Q14162 830 aa10.63□□□□□ -0.71
LIN54-202ENST00000442461 NTRK3Q16288 839 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms