RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 FAM86C2PA6NEL3 165 aa15.81■□□□□ 0.12
CSNK1E-210ENST00000442216 F8VZ95 297 aa15.81■□□□□ 0.12
CSNK1E-210ENST00000442216 GOLGA6L19H0YKK7 550 aa15.81■□□□□ 0.12
CSNK1E-210ENST00000442216 COCHO43405 550 aa15.81■□□□□ 0.12
CSNK1E-210ENST00000442216 TLR5O60602 858 aa15.81■□□□□ 0.12
CSNK1E-210ENST00000442216 MBL2P11226 248 aaPredicted RBP15.81■□□□□ 0.12
CSNK1E-210ENST00000442216 RALAP11233 206 aa15.81■□□□□ 0.12
CSNK1E-210ENST00000442216 ATP5C1P36542 298 aaKnown RBP15.81■□□□□ 0.12
CSNK1E-210ENST00000442216 ACADSBP45954 432 aa15.81■□□□□ 0.12
CSNK1E-210ENST00000442216 STARD6P59095 220 aa15.81■□□□□ 0.12
CSNK1E-210ENST00000442216 MTF1Q14872 753 aa15.81■□□□□ 0.12
CSNK1E-210ENST00000442216 MLF2Q15773 248 aaPredicted RBP15.81■□□□□ 0.12
CSNK1E-210ENST00000442216 PMF1Q6P1K2 205 aa15.81■□□□□ 0.12
CSNK1E-210ENST00000442216 CC2D1AQ6P1N0 951 aaPredicted RBP15.81■□□□□ 0.12
CSNK1E-210ENST00000442216 C1orf228Q6PIY5 440 aa15.81■□□□□ 0.12
CSNK1E-210ENST00000442216 LRSAM1Q6UWE0 723 aa15.81■□□□□ 0.12
CSNK1E-210ENST00000442216 LUZP1Q86V48 1076 aa15.81■□□□□ 0.12
CSNK1E-210ENST00000442216 GPIHBP1Q8IV16 184 aa15.81■□□□□ 0.12
CSNK1E-210ENST00000442216 KMT2EQ8IZD2 1858 aa15.81■□□□□ 0.12
CSNK1E-210ENST00000442216 SIX5Q8N196 739 aa15.81■□□□□ 0.12
CSNK1E-210ENST00000442216 SIX6OS1Q8N1H7 587 aa15.81■□□□□ 0.12
CSNK1E-210ENST00000442216 FBXL6Q8N531 539 aa15.81■□□□□ 0.12
CSNK1E-210ENST00000442216 NEK11Q8NG66 645 aa15.81■□□□□ 0.12
CSNK1E-210ENST00000442216 MSANTD3Q96H12 275 aa15.81■□□□□ 0.12
CSNK1E-210ENST00000442216 FAM83CQ9BQN1 747 aa15.81■□□□□ 0.12
CSNK1E-210ENST00000442216 LHX5Q9H2C1 402 aa15.81■□□□□ 0.12
CSNK1E-210ENST00000442216 CCSER2Q9H7U1 834 aa15.81■□□□□ 0.12
CSNK1E-210ENST00000442216 FAM207AQ9NSI2 230 aaPredicted RBP15.81■□□□□ 0.12
CSNK1E-210ENST00000442216 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.81■□□□□ 0.12
CSNK1E-210ENST00000442216 NAGPAQ9UK23 515 aa15.81■□□□□ 0.12
CSNK1E-210ENST00000442216 A0A1B0GTH6 734 aa15.8■□□□□ 0.12
CSNK1E-210ENST00000442216 A0A1W2PQH9 124 aa15.8■□□□□ 0.12
CSNK1E-210ENST00000442216 LEFTY2O00292 366 aa15.8■□□□□ 0.12
CSNK1E-210ENST00000442216 FBXO21O94952 628 aa15.8■□□□□ 0.12
CSNK1E-210ENST00000442216 CALCAP01258 141 aa15.8■□□□□ 0.12
CSNK1E-210ENST00000442216 KLK7P49862 253 aa15.8■□□□□ 0.12
CSNK1E-210ENST00000442216 JAM2P57087 298 aa15.8■□□□□ 0.12
CSNK1E-210ENST00000442216 POLR2FP61218 127 aaKnown RBP15.8■□□□□ 0.12
CSNK1E-210ENST00000442216 ADIGQ0VDE8 80 aa15.8■□□□□ 0.12
CSNK1E-210ENST00000442216 PDGFRLQ15198 375 aa15.8■□□□□ 0.12
CSNK1E-210ENST00000442216 HFE2Q6ZVN8 426 aa15.8■□□□□ 0.12
CSNK1E-210ENST00000442216 SCD5Q86SK9 330 aa15.8■□□□□ 0.12
CSNK1E-210ENST00000442216 CSGALNACT1Q8TDX6 532 aa15.8■□□□□ 0.12
CSNK1E-210ENST00000442216 SH3RF2Q8TEC5 729 aa15.8■□□□□ 0.12
CSNK1E-210ENST00000442216 IRGQQ8WZA9 623 aa15.8■□□□□ 0.12
CSNK1E-210ENST00000442216 PCMTD1Q96MG8 357 aaPredicted RBP15.8■□□□□ 0.12
CSNK1E-210ENST00000442216 DDX23Q9BUQ8 820 aaKnown RBP15.8■□□□□ 0.12
CSNK1E-210ENST00000442216 ULBP1Q9BZM6 244 aa15.8■□□□□ 0.12
CSNK1E-210ENST00000442216 MFSD1Q9H3U5 465 aa15.8■□□□□ 0.12
CSNK1E-210ENST00000442216 C8orf33Q9H7E9 229 aaPredicted RBP15.8■□□□□ 0.12
CSNK1E-210ENST00000442216 NMUR1Q9HB89 426 aa15.8■□□□□ 0.12
CSNK1E-210ENST00000442216 ACP6Q9NPH0 428 aa15.8■□□□□ 0.12
CSNK1E-210ENST00000442216 OSER1Q9NX31 292 aa15.8■□□□□ 0.12
CSNK1E-210ENST00000442216 CA14Q9ULX7 337 aa15.8■□□□□ 0.12
CSNK1E-210ENST00000442216 CPQQ9Y646 472 aa15.8■□□□□ 0.12
CSNK1E-210ENST00000442216 A0A1W2PQC6 194 aa15.79■□□□□ 0.12
CSNK1E-210ENST00000442216 SLC9A3R1O14745 358 aaPredicted RBP15.79■□□□□ 0.12
CSNK1E-210ENST00000442216 SART1O43290 800 aaKnown RBP15.79■□□□□ 0.12
CSNK1E-210ENST00000442216 SERPINC1P01008 464 aa15.79■□□□□ 0.12
CSNK1E-210ENST00000442216 RARGP13631 454 aa15.79■□□□□ 0.12
CSNK1E-210ENST00000442216 CYP11B1P15538 503 aa15.79■□□□□ 0.12
CSNK1E-210ENST00000442216 KRT9P35527 623 aa15.79■□□□□ 0.12
CSNK1E-210ENST00000442216 PGFP49763 221 aa15.79■□□□□ 0.12
CSNK1E-210ENST00000442216 CLCN5P51795 746 aa15.79■□□□□ 0.12
CSNK1E-210ENST00000442216 DAOAP59103 153 aa15.79■□□□□ 0.12
CSNK1E-210ENST00000442216 YWHAGP61981 247 aaKnown RBP eCLIP15.79■□□□□ 0.12
CSNK1E-210ENST00000442216 ZXDBP98169 803 aa15.79■□□□□ 0.12
CSNK1E-210ENST00000442216 BHLHA9Q7RTU4 235 aa15.79■□□□□ 0.12
CSNK1E-210ENST00000442216 SLC47A2Q86VL8 602 aa15.79■□□□□ 0.12
CSNK1E-210ENST00000442216 SUGP1Q8IWZ8 645 aaKnown RBP15.79■□□□□ 0.12
CSNK1E-210ENST00000442216 RIN3Q8TB24 985 aa15.79■□□□□ 0.12
CSNK1E-210ENST00000442216 OSCP1Q8WVF1 389 aa15.79■□□□□ 0.12
CSNK1E-210ENST00000442216 ZFRQ96KR1 1074 aaKnown RBP15.79■□□□□ 0.12
CSNK1E-210ENST00000442216 SPAG5Q96R06 1193 aa15.79■□□□□ 0.12
CSNK1E-210ENST00000442216 NELL2Q99435 816 aa15.79■□□□□ 0.12
CSNK1E-210ENST00000442216 SLC4A5Q9BY07 1137 aa15.79■□□□□ 0.12
CSNK1E-210ENST00000442216 NACA2Q9H009 215 aa15.79■□□□□ 0.12
CSNK1E-210ENST00000442216 TSPY26PQ9H489 355 aa15.79■□□□□ 0.12
CSNK1E-210ENST00000442216 HEBP1Q9NRV9 189 aa15.79■□□□□ 0.12
CSNK1E-210ENST00000442216 GKN1Q9NS71 199 aa15.79■□□□□ 0.12
CSNK1E-210ENST00000442216 OLA1Q9NTK5 396 aaKnown RBP15.79■□□□□ 0.12
CSNK1E-210ENST00000442216 DNMT3LQ9UJW3 386 aa15.79■□□□□ 0.12
CSNK1E-210ENST00000442216 TRIOO75962 3097 aa15.78■□□□□ 0.12
CSNK1E-210ENST00000442216 E2F8A0AVK6 867 aa15.78■□□□□ 0.12
CSNK1E-210ENST00000442216 MAN2B1O00754 1011 aa15.78■□□□□ 0.12
CSNK1E-210ENST00000442216 EPHB6O15197 1021 aa15.78■□□□□ 0.12
CSNK1E-210ENST00000442216 TEX33O43247 280 aa15.78■□□□□ 0.12
CSNK1E-210ENST00000442216 GABBR2O75899 941 aa15.78■□□□□ 0.12
CSNK1E-210ENST00000442216 PNMA6AP0CW24 399 aaPredicted RBP15.78■□□□□ 0.12
CSNK1E-210ENST00000442216 LCP1P13796 627 aa15.78■□□□□ 0.12
CSNK1E-210ENST00000442216 SOX5P35711 763 aa15.78■□□□□ 0.12
CSNK1E-210ENST00000442216 STAT1P42224 750 aa15.78■□□□□ 0.12
CSNK1E-210ENST00000442216 RGS7P49802 495 aa15.78■□□□□ 0.12
CSNK1E-210ENST00000442216 SNX16P57768 344 aa15.78■□□□□ 0.12
CSNK1E-210ENST00000442216 GOLGA8FQ08AF8 430 aa15.78■□□□□ 0.12
CSNK1E-210ENST00000442216 GOLGA8DPQ0D2H9 430 aa15.78■□□□□ 0.12
CSNK1E-210ENST00000442216 NR1I3Q14994 352 aa15.78■□□□□ 0.12
CSNK1E-210ENST00000442216 ITPRIPL2Q3MIP1 535 aa15.78■□□□□ 0.12
CSNK1E-210ENST00000442216 DENND1BQ6P3S1 775 aa15.78■□□□□ 0.12
CSNK1E-210ENST00000442216 TMEM110Q86TL2 294 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms