RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 SDK1Q7Z5N4 2213 aa19.97■□□□□ 0.79
HMGB3P22-201ENST00000442010 E2F8A0AVK6 867 aa19.97■□□□□ 0.79
HMGB3P22-201ENST00000442010 SLC9A3R1O14745 358 aaPredicted RBP19.97■□□□□ 0.79
HMGB3P22-201ENST00000442010 SCAMP3O14828 347 aaKnown RBP19.97■□□□□ 0.79
HMGB3P22-201ENST00000442010 TLR5O60602 858 aa19.97■□□□□ 0.79
HMGB3P22-201ENST00000442010 FMO5P49326 533 aa19.97■□□□□ 0.79
HMGB3P22-201ENST00000442010 FNTBP49356 437 aa19.97■□□□□ 0.79
HMGB3P22-201ENST00000442010 CUL2Q13617 745 aa19.97■□□□□ 0.79
HMGB3P22-201ENST00000442010 DHCR24Q15392 516 aa19.97■□□□□ 0.79
HMGB3P22-201ENST00000442010 FBXO43Q4G163 708 aa19.97■□□□□ 0.79
HMGB3P22-201ENST00000442010 ARHGAP17Q68EM7 881 aa19.97■□□□□ 0.79
HMGB3P22-201ENST00000442010 RHBDF2Q6PJF5 856 aa19.97■□□□□ 0.79
HMGB3P22-201ENST00000442010 DCLK2Q8N568 766 aa19.97■□□□□ 0.79
HMGB3P22-201ENST00000442010 UBR7Q8N806 425 aa19.97■□□□□ 0.79
HMGB3P22-201ENST00000442010 NELFBQ8WX92 580 aa19.97■□□□□ 0.79
HMGB3P22-201ENST00000442010 WBP2Q969T9 261 aa19.97■□□□□ 0.79
HMGB3P22-201ENST00000442010 EXOC4Q96A65 974 aa19.97■□□□□ 0.79
HMGB3P22-201ENST00000442010 NMUR1Q9HB89 426 aa19.97■□□□□ 0.79
HMGB3P22-201ENST00000442010 TLR8Q9NR97 1041 aaKnown RBP19.97■□□□□ 0.79
HMGB3P22-201ENST00000442010 SMG5Q9UPR3 1016 aaKnown RBP19.97■□□□□ 0.79
HMGB3P22-201ENST00000442010 USP3Q9Y6I4 520 aa19.97■□□□□ 0.79
HMGB3P22-201ENST00000442010 CEP250Q9BV73 2442 aa19.96■□□□□ 0.79
HMGB3P22-201ENST00000442010 BIN1O00499 593 aa19.96■□□□□ 0.79
HMGB3P22-201ENST00000442010 CYP26A1O43174 497 aa19.96■□□□□ 0.79
HMGB3P22-201ENST00000442010 GREM1O60565 184 aa19.96■□□□□ 0.79
HMGB3P22-201ENST00000442010 ACO1P21399 889 aaKnown RBP19.96■□□□□ 0.79
HMGB3P22-201ENST00000442010 KLHL10Q6JEL2 608 aa19.96■□□□□ 0.79
HMGB3P22-201ENST00000442010 LONP2Q86WA8 852 aa19.96■□□□□ 0.79
HMGB3P22-201ENST00000442010 JAKMIP2Q96AA8 810 aa19.96■□□□□ 0.79
HMGB3P22-201ENST00000442010 DNAI2Q9GZS0 605 aa19.96■□□□□ 0.79
HMGB3P22-201ENST00000442010 CHMP5Q9NZZ3 219 aa19.96■□□□□ 0.79
HMGB3P22-201ENST00000442010 TBC1D14Q9P2M4 693 aa19.96■□□□□ 0.79
HMGB3P22-201ENST00000442010 HRO43593 1189 aa19.95■□□□□ 0.78
HMGB3P22-201ENST00000442010 ATG13O75143 517 aa19.95■□□□□ 0.78
HMGB3P22-201ENST00000442010 TBX18O95935 607 aa19.95■□□□□ 0.78
HMGB3P22-201ENST00000442010 UBE2HP62256 183 aa19.95■□□□□ 0.78
HMGB3P22-201ENST00000442010 CCDC186Q7Z3E2 898 aa19.95■□□□□ 0.78
HMGB3P22-201ENST00000442010 ZNF276Q8N554 614 aa19.95■□□□□ 0.78
HMGB3P22-201ENST00000442010 LMO3Q8TAP4 145 aa19.95■□□□□ 0.78
HMGB3P22-201ENST00000442010 OTUB2Q96DC9 234 aa19.95■□□□□ 0.78
HMGB3P22-201ENST00000442010 KLF16Q9BXK1 252 aaPredicted RBP19.95■□□□□ 0.78
HMGB3P22-201ENST00000442010 UBXN6Q9BZV1 441 aa19.95■□□□□ 0.78
HMGB3P22-201ENST00000442010 POLR3BQ9NW08 1133 aaPredicted RBP19.95■□□□□ 0.78
HMGB3P22-201ENST00000442010 CTNND2Q9UQB3 1225 aa19.95■□□□□ 0.78
HMGB3P22-201ENST00000442010 DMXL1Q9Y485 3027 aa19.94■□□□□ 0.78
HMGB3P22-201ENST00000442010 A0A1W2PQH9 124 aa19.94■□□□□ 0.78
HMGB3P22-201ENST00000442010 BICDL2A1A5D9 508 aa19.94■□□□□ 0.78
HMGB3P22-201ENST00000442010 K7EQS6 105 aa19.94■□□□□ 0.78
HMGB3P22-201ENST00000442010 CNR2P34972 360 aa19.94■□□□□ 0.78
HMGB3P22-201ENST00000442010 MARSP56192 900 aaKnown RBP19.94■□□□□ 0.78
HMGB3P22-201ENST00000442010 RAB41Q5JT25 222 aa19.94■□□□□ 0.78
HMGB3P22-201ENST00000442010 KLHDC10Q6PID8 442 aa19.94■□□□□ 0.78
HMGB3P22-201ENST00000442010 SCD5Q86SK9 330 aa19.94■□□□□ 0.78
HMGB3P22-201ENST00000442010 WDR5BQ86VZ2 330 aa19.94■□□□□ 0.78
HMGB3P22-201ENST00000442010 TRIML1Q8N9V2 468 aa19.94■□□□□ 0.78
HMGB3P22-201ENST00000442010 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.94■□□□□ 0.78
HMGB3P22-201ENST00000442010 A0A0A0MRY4 1105 aa19.93■□□□□ 0.78
HMGB3P22-201ENST00000442010 ANTXRLA6NF34 631 aa19.93■□□□□ 0.78
HMGB3P22-201ENST00000442010 CHRM1P11229 460 aaPredicted RBP19.93■□□□□ 0.78
HMGB3P22-201ENST00000442010 ATP5C1P36542 298 aaKnown RBP19.93■□□□□ 0.78
HMGB3P22-201ENST00000442010 EIF2DP41214 584 aaKnown RBP19.93■□□□□ 0.78
HMGB3P22-201ENST00000442010 SLC6A11P48066 632 aa19.93■□□□□ 0.78
HMGB3P22-201ENST00000442010 STX17P56962 302 aa19.93■□□□□ 0.78
HMGB3P22-201ENST00000442010 MESP2Q0VG99 397 aa19.93■□□□□ 0.78
HMGB3P22-201ENST00000442010 PAK1Q13153 545 aa19.93■□□□□ 0.78
HMGB3P22-201ENST00000442010 SRSF5Q13243 272 aaKnown RBP19.93■□□□□ 0.78
HMGB3P22-201ENST00000442010 CCDC40Q4G0X9 1142 aa19.93■□□□□ 0.78
HMGB3P22-201ENST00000442010 HEATR6Q6AI08 1181 aaKnown RBP19.93■□□□□ 0.78
HMGB3P22-201ENST00000442010 HTR3DQ70Z44 454 aa19.93■□□□□ 0.78
HMGB3P22-201ENST00000442010 SYT13Q7L8C5 426 aa19.93■□□□□ 0.78
HMGB3P22-201ENST00000442010 PIGZQ86VD9 579 aa19.93■□□□□ 0.78
HMGB3P22-201ENST00000442010 C12orf40Q86WS4 652 aa19.93■□□□□ 0.78
HMGB3P22-201ENST00000442010 TTC30AQ86WT1 665 aa19.93■□□□□ 0.78
HMGB3P22-201ENST00000442010 TRIM59Q8IWR1 403 aa19.93■□□□□ 0.78
HMGB3P22-201ENST00000442010 BBS7Q8IWZ6 715 aa19.93■□□□□ 0.78
HMGB3P22-201ENST00000442010 ANKRD52Q8NB46 1076 aa19.93■□□□□ 0.78
HMGB3P22-201ENST00000442010 RPLP0P6Q8NHW5 317 aa19.93■□□□□ 0.78
HMGB3P22-201ENST00000442010 KIAA1468Q9P260 1216 aa19.93■□□□□ 0.78
HMGB3P22-201ENST00000442010 SH3BP1Q9Y3L3 701 aa19.93■□□□□ 0.78
HMGB3P22-201ENST00000442010 CCDC163A0A0D9SF12 145 aa19.92■□□□□ 0.78
HMGB3P22-201ENST00000442010 P4HA2O15460 535 aa19.92■□□□□ 0.78
HMGB3P22-201ENST00000442010 ADH1CP00326 375 aa19.92■□□□□ 0.78
HMGB3P22-201ENST00000442010 RARGP13631 454 aa19.92■□□□□ 0.78
HMGB3P22-201ENST00000442010 TBXAS1P24557 533 aaPredicted RBP19.92■□□□□ 0.78
HMGB3P22-201ENST00000442010 PSEN1P49768 467 aa19.92■□□□□ 0.78
HMGB3P22-201ENST00000442010 LRMPQ12912 555 aa19.92■□□□□ 0.78
HMGB3P22-201ENST00000442010 LY6G5CQ5SRR4 150 aa19.92■□□□□ 0.78
HMGB3P22-201ENST00000442010 PHTF2Q8N3S3 785 aa19.92■□□□□ 0.78
HMGB3P22-201ENST00000442010 USP33Q8TEY7 942 aa19.92■□□□□ 0.78
HMGB3P22-201ENST00000442010 NUDT5Q9UKK9 219 aa19.92■□□□□ 0.78
HMGB3P22-201ENST00000442010 DNAH14Q0VDD8 3507 aa19.91■□□□□ 0.78
HMGB3P22-201ENST00000442010 TULP2O00295 520 aa19.91■□□□□ 0.78
HMGB3P22-201ENST00000442010 ADH5P11766 374 aa19.91■□□□□ 0.78
HMGB3P22-201ENST00000442010 TGM1P22735 817 aa19.91■□□□□ 0.78
HMGB3P22-201ENST00000442010 YWHAEP62258 255 aaKnown RBP19.91■□□□□ 0.78
HMGB3P22-201ENST00000442010 SFTPA1Q8IWL2 248 aa19.91■□□□□ 0.78
HMGB3P22-201ENST00000442010 ETFBKMTQ8IXQ9 262 aa19.91■□□□□ 0.78
HMGB3P22-201ENST00000442010 KIAA2013Q8IYS2 634 aa19.91■□□□□ 0.78
HMGB3P22-201ENST00000442010 CAMKK1Q8N5S9 505 aa19.91■□□□□ 0.78
HMGB3P22-201ENST00000442010 MED15Q96RN5 788 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms