RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 ROR1Q01973 937 aa13.75□□□□□ -0.21
CPSF4-206ENST00000441580 TRIP13Q15645 432 aaPredicted RBP13.75□□□□□ -0.21
CPSF4-206ENST00000441580 MAPRE1Q15691 268 aaKnown RBP13.75□□□□□ -0.21
CPSF4-206ENST00000441580 DPYSL2Q16555 572 aa13.75□□□□□ -0.21
CPSF4-206ENST00000441580 P3H1Q32P28 736 aa13.75□□□□□ -0.21
CPSF4-206ENST00000441580 GLB1LQ6UWU2 654 aa13.75□□□□□ -0.21
CPSF4-206ENST00000441580 LEKR1Q6ZMV7 388 aa13.75□□□□□ -0.21
CPSF4-206ENST00000441580 CLEC20AQ6ZU45 233 aa13.75□□□□□ -0.21
CPSF4-206ENST00000441580 RNF169Q8NCN4 708 aa13.75□□□□□ -0.21
CPSF4-206ENST00000441580 MYCBPAPQ8TBZ2 947 aa13.75□□□□□ -0.21
CPSF4-206ENST00000441580 RSAD2Q8WXG1 361 aa13.75□□□□□ -0.21
CPSF4-206ENST00000441580 HAUS1Q96CS2 278 aa13.75□□□□□ -0.21
CPSF4-206ENST00000441580 TTC25Q96NG3 672 aa13.75□□□□□ -0.21
CPSF4-206ENST00000441580 FAM118BQ9BPY3 351 aa13.75□□□□□ -0.21
CPSF4-206ENST00000441580 TRIM62Q9BVG3 475 aa13.75□□□□□ -0.21
CPSF4-206ENST00000441580 CDC42EP4Q9H3Q1 356 aaKnown RBP13.75□□□□□ -0.21
CPSF4-206ENST00000441580 PCDH18Q9HCL0 1135 aa13.75□□□□□ -0.21
CPSF4-206ENST00000441580 CRTAC1Q9NQ79 661 aa13.75□□□□□ -0.21
CPSF4-206ENST00000441580 RGS18Q9NS28 235 aa13.75□□□□□ -0.21
CPSF4-206ENST00000441580 TMEM189-UBE2V1I3L0A0 370 aa13.74□□□□□ -0.21
CPSF4-206ENST00000441580 M0QZQ0 153 aa13.74□□□□□ -0.21
CPSF4-206ENST00000441580 AP1G2O75843 785 aa13.74□□□□□ -0.21
CPSF4-206ENST00000441580 GABBR2O75899 941 aa13.74□□□□□ -0.21
CPSF4-206ENST00000441580 ABHD2P08910 425 aa13.74□□□□□ -0.21
CPSF4-206ENST00000441580 CD48P09326 243 aa13.74□□□□□ -0.21
CPSF4-206ENST00000441580 COL6A1P12109 1028 aa13.74□□□□□ -0.21
CPSF4-206ENST00000441580 GRK4P32298 578 aa13.74□□□□□ -0.21
CPSF4-206ENST00000441580 SULT1E1P49888 294 aa13.74□□□□□ -0.21
CPSF4-206ENST00000441580 GYS2P54840 703 aa13.74□□□□□ -0.21
CPSF4-206ENST00000441580 AIF1P55008 147 aa13.74□□□□□ -0.21
CPSF4-206ENST00000441580 EIF3EP60228 445 aaKnown RBP13.74□□□□□ -0.21
CPSF4-206ENST00000441580 MRPS5P82675 430 aaKnown RBP13.74□□□□□ -0.21
CPSF4-206ENST00000441580 ADCY1Q08828 1119 aa13.74□□□□□ -0.21
CPSF4-206ENST00000441580 INTS6LQ5JSJ4 861 aaKnown RBP13.74□□□□□ -0.21
CPSF4-206ENST00000441580 EMC10Q5UCC4 262 aa13.74□□□□□ -0.21
CPSF4-206ENST00000441580 SLC9A4Q6AI14 798 aa13.74□□□□□ -0.21
CPSF4-206ENST00000441580 SCYL2Q6P3W7 929 aa13.74□□□□□ -0.21
CPSF4-206ENST00000441580 CCDC25Q86WR0 208 aa13.74□□□□□ -0.21
CPSF4-206ENST00000441580 CDKL3Q8IVW4 592 aaPredicted RBP13.74□□□□□ -0.21
CPSF4-206ENST00000441580 SCUBE3Q8IX30 993 aa13.74□□□□□ -0.21
CPSF4-206ENST00000441580 C3orf58Q8NDZ4 430 aa13.74□□□□□ -0.21
CPSF4-206ENST00000441580 P3H4Q92791 437 aa13.74□□□□□ -0.21
CPSF4-206ENST00000441580 KHSRPQ92945 711 aaKnown RBP eCLIP13.74□□□□□ -0.21
CPSF4-206ENST00000441580 FAM149B1Q96BN6 582 aa13.74□□□□□ -0.21
CPSF4-206ENST00000441580 PGM2Q96G03 612 aa13.74□□□□□ -0.21
CPSF4-206ENST00000441580 RNF157Q96PX1 679 aa13.74□□□□□ -0.21
CPSF4-206ENST00000441580 SLC2A13Q96QE2 648 aa13.74□□□□□ -0.21
CPSF4-206ENST00000441580 ACBD6Q9BR61 282 aa13.74□□□□□ -0.21
CPSF4-206ENST00000441580 B3GNT5Q9BYG0 378 aa13.74□□□□□ -0.21
CPSF4-206ENST00000441580 ROPN1BQ9BZX4 212 aaPredicted RBP13.74□□□□□ -0.21
CPSF4-206ENST00000441580 ROPN1Q9HAT0 212 aaPredicted RBP13.74□□□□□ -0.21
CPSF4-206ENST00000441580 PNPLA8Q9NP80 782 aa13.74□□□□□ -0.21
CPSF4-206ENST00000441580 CNGB3Q9NQW8 809 aa13.74□□□□□ -0.21
CPSF4-206ENST00000441580 MIOSQ9NXC5 875 aa13.74□□□□□ -0.21
CPSF4-206ENST00000441580 RRN3Q9NYV6 651 aa13.74□□□□□ -0.21
CPSF4-206ENST00000441580 TPX2Q9ULW0 747 aaKnown RBP13.74□□□□□ -0.21
CPSF4-206ENST00000441580 AP4E1Q9UPM8 1137 aa13.74□□□□□ -0.21
CPSF4-206ENST00000441580 INPP5FQ9Y2H2 1132 aa13.74□□□□□ -0.21
CPSF4-206ENST00000441580 SF3B1O75533 1304 aaKnown RBP eCLIP13.73□□□□□ -0.212e-6■■■■■ 80.4
CPSF4-206ENST00000441580 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.73□□□□□ -0.21
CPSF4-206ENST00000441580 C9IYK1 514 aa13.73□□□□□ -0.21
CPSF4-206ENST00000441580 ARVCFO00192 962 aa13.73□□□□□ -0.21
CPSF4-206ENST00000441580 TP73O15350 636 aa13.73□□□□□ -0.21
CPSF4-206ENST00000441580 B3GAT3O94766 335 aa13.73□□□□□ -0.21
CPSF4-206ENST00000441580 POMCP01189 267 aa13.73□□□□□ -0.21
CPSF4-206ENST00000441580 CAPN2P17655 700 aa13.73□□□□□ -0.21
CPSF4-206ENST00000441580 ATP5DP30049 168 aa13.73□□□□□ -0.21
CPSF4-206ENST00000441580 NOS2P35228 1153 aa13.73□□□□□ -0.21
CPSF4-206ENST00000441580 TSPY1Q01534 308 aa13.73□□□□□ -0.21
CPSF4-206ENST00000441580 GPS1Q13098 491 aa13.73□□□□□ -0.21
CPSF4-206ENST00000441580 BFSP2Q13515 415 aa13.73□□□□□ -0.21
CPSF4-206ENST00000441580 TAF5Q15542 800 aa13.73□□□□□ -0.21
CPSF4-206ENST00000441580 SLC25A52Q3SY17 297 aa13.73□□□□□ -0.21
CPSF4-206ENST00000441580 TIGD5Q53EQ6 642 aa13.73□□□□□ -0.21
CPSF4-206ENST00000441580 ERMARDQ5T6L9 678 aa13.73□□□□□ -0.21
CPSF4-206ENST00000441580 RNASEH2BQ5TBB1 312 aaKnown RBP13.73□□□□□ -0.21
CPSF4-206ENST00000441580 LHX8Q68G74 356 aa13.73□□□□□ -0.21
CPSF4-206ENST00000441580 TRAF7Q6Q0C0 670 aa13.73□□□□□ -0.21
CPSF4-206ENST00000441580 SLC24A5Q71RS6 500 aa13.73□□□□□ -0.21
CPSF4-206ENST00000441580 LRRC8DQ7L1W4 858 aa13.73□□□□□ -0.21
CPSF4-206ENST00000441580 SCML4Q8N228 414 aa13.73□□□□□ -0.21
CPSF4-206ENST00000441580 OR2W6PQ8NHA6 318 aa13.73□□□□□ -0.21
CPSF4-206ENST00000441580 CLEC4CQ8WTT0 213 aa13.73□□□□□ -0.21
CPSF4-206ENST00000441580 RSPH1Q8WYR4 309 aa13.73□□□□□ -0.21
CPSF4-206ENST00000441580 IRGQQ8WZA9 623 aa13.73□□□□□ -0.21
CPSF4-206ENST00000441580 MYLPFQ96A32 169 aa13.73□□□□□ -0.21
CPSF4-206ENST00000441580 PCED1BQ96HM7 432 aa13.73□□□□□ -0.21
CPSF4-206ENST00000441580 SUSD3Q96L08 255 aa13.73□□□□□ -0.21
CPSF4-206ENST00000441580 LPIN3Q9BQK8 851 aa13.73□□□□□ -0.21
CPSF4-206ENST00000441580 TMEM121Q9BTD3 319 aa13.73□□□□□ -0.21
CPSF4-206ENST00000441580 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.73□□□□□ -0.219e-6■■□□□ 13.2
CPSF4-206ENST00000441580 POPDC2Q9HBU9 364 aa13.73□□□□□ -0.21
CPSF4-206ENST00000441580 AAASQ9NRG9 546 aa13.73□□□□□ -0.21
CPSF4-206ENST00000441580 PCDHB8Q9UN66 801 aa13.73□□□□□ -0.21
CPSF4-206ENST00000441580 DNM1LO00429 736 aa13.72□□□□□ -0.21
CPSF4-206ENST00000441580 EIF3HO15372 352 aaKnown RBP eCLIP13.72□□□□□ -0.21
CPSF4-206ENST00000441580 ATP2C2O75185 946 aa13.72□□□□□ -0.21
CPSF4-206ENST00000441580 TTC4O95801 387 aa13.72□□□□□ -0.21
CPSF4-206ENST00000441580 AGTP01019 485 aa13.72□□□□□ -0.21
CPSF4-206ENST00000441580 IFNB1P01574 187 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms