RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 DMP1Q13316 513 aaPredicted RBP21.08■□□□□ 0.97
SHOX2-203ENST00000441443 DNAJC24Q6P3W2 148 aa21.08■□□□□ 0.97
SHOX2-203ENST00000441443 UGT2A3Q6UWM9 527 aa21.08■□□□□ 0.97
SHOX2-203ENST00000441443 ARPINQ7Z6K5 226 aa21.08■□□□□ 0.97
SHOX2-203ENST00000441443 ADGRG6Q86SQ4 1221 aa21.08■□□□□ 0.97
SHOX2-203ENST00000441443 DGCR14Q96DF8 476 aaKnown RBP21.08■□□□□ 0.97
SHOX2-203ENST00000441443 MMP19Q99542 508 aa21.08■□□□□ 0.97
SHOX2-203ENST00000441443 HBS1LQ9Y450 684 aaKnown RBP21.08■□□□□ 0.97
SHOX2-203ENST00000441443 CXorf49A8MYA2 514 aaPredicted RBP21.08■□□□□ 0.96
SHOX2-203ENST00000441443 NDC80O14777 642 aa21.08■□□□□ 0.96
SHOX2-203ENST00000441443 SERPINA6P08185 405 aa21.08■□□□□ 0.96
SHOX2-203ENST00000441443 FOLH1Q04609 750 aa21.08■□□□□ 0.96
SHOX2-203ENST00000441443 PEX6Q13608 980 aa21.08■□□□□ 0.96
SHOX2-203ENST00000441443 TCHHL1Q5QJ38 904 aaPredicted RBP21.08■□□□□ 0.96
SHOX2-203ENST00000441443 TRIM72Q6ZMU5 477 aa21.08■□□□□ 0.96
SHOX2-203ENST00000441443 TAAR1Q96RJ0 339 aa21.08■□□□□ 0.96
SHOX2-203ENST00000441443 PCDHGB4Q9UN71 923 aa21.08■□□□□ 0.96
SHOX2-203ENST00000441443 PPME1Q9Y570 386 aa21.08■□□□□ 0.96
SHOX2-203ENST00000441443 PCDHGB5Q9Y5G0 923 aa21.08■□□□□ 0.96
SHOX2-203ENST00000441443 UGT1A9O60656 530 aa21.07■□□□□ 0.96
SHOX2-203ENST00000441443 ZC3H11AO75152 810 aaKnown RBP eCLIP21.07■□□□□ 0.96
SHOX2-203ENST00000441443 TMCC1O94876 653 aa21.07■□□□□ 0.96
SHOX2-203ENST00000441443 PROCP04070 461 aa21.07■□□□□ 0.96
SHOX2-203ENST00000441443 CD48P09326 243 aa21.07■□□□□ 0.96
SHOX2-203ENST00000441443 RAG1P15918 1043 aa21.07■□□□□ 0.96
SHOX2-203ENST00000441443 MMP8P22894 467 aa21.07■□□□□ 0.96
SHOX2-203ENST00000441443 CUL2Q13617 745 aa21.07■□□□□ 0.96
SHOX2-203ENST00000441443 ANKRD20A4Q4UJ75 823 aa21.07■□□□□ 0.96
SHOX2-203ENST00000441443 TEX44Q53QW1 395 aa21.07■□□□□ 0.96
SHOX2-203ENST00000441443 SCARA3Q6AZY7 606 aa21.07■□□□□ 0.96
SHOX2-203ENST00000441443 SAMD7Q7Z3H4 446 aa21.07■□□□□ 0.96
SHOX2-203ENST00000441443 C1orf21Q9H246 121 aa21.07■□□□□ 0.96
SHOX2-203ENST00000441443 UGT1A7Q9HAW7 530 aa21.07■□□□□ 0.96
SHOX2-203ENST00000441443 UGT1A10Q9HAW8 530 aa21.07■□□□□ 0.96
SHOX2-203ENST00000441443 UGT1A8Q9HAW9 530 aa21.07■□□□□ 0.96
SHOX2-203ENST00000441443 PTPRJQ12913 1337 aa21.07■□□□□ 0.96
SHOX2-203ENST00000441443 CAPN8A6NHC0 703 aa21.07■□□□□ 0.96
SHOX2-203ENST00000441443 SMIM18P0DKX4 95 aa21.07■□□□□ 0.96
SHOX2-203ENST00000441443 RABGAP1LQ5R372 815 aa21.07■□□□□ 0.96
SHOX2-203ENST00000441443 CYP4A22Q5TCH4 519 aa21.07■□□□□ 0.96
SHOX2-203ENST00000441443 PLEKHG4BQ96PX9 1271 aa21.07■□□□□ 0.96
SHOX2-203ENST00000441443 MYOZ2Q9NPC6 264 aa21.07■□□□□ 0.96
SHOX2-203ENST00000441443 GJA3Q9Y6H8 435 aa21.07■□□□□ 0.96
SHOX2-203ENST00000441443 ZNF536O15090 1300 aa21.07■□□□□ 0.96
SHOX2-203ENST00000441443 COL4A5P29400 1685 aa21.07■□□□□ 0.96
SHOX2-203ENST00000441443 RGS2P41220 211 aa21.07■□□□□ 0.96
SHOX2-203ENST00000441443 ACOT2P49753 483 aa21.07■□□□□ 0.96
SHOX2-203ENST00000441443 MCCD1P59942 119 aaPredicted RBP21.07■□□□□ 0.96
SHOX2-203ENST00000441443 MTMR1Q13613 665 aa21.07■□□□□ 0.96
SHOX2-203ENST00000441443 TTC39BQ5VTQ0 682 aaPredicted RBP21.07■□□□□ 0.96
SHOX2-203ENST00000441443 C15orf39Q6ZRI6 1047 aa21.07■□□□□ 0.96
SHOX2-203ENST00000441443 ICAM1P05362 532 aa21.06■□□□□ 0.96
SHOX2-203ENST00000441443 ATP6V1B1P15313 513 aa21.06■□□□□ 0.96
SHOX2-203ENST00000441443 RPS6P62753 249 aaKnown RBP21.06■□□□□ 0.96
SHOX2-203ENST00000441443 ZNF394Q53GI3 561 aa21.06■□□□□ 0.96
SHOX2-203ENST00000441443 ZNF606Q8WXB4 792 aa21.06■□□□□ 0.96
SHOX2-203ENST00000441443 ABTB1Q969K4 478 aaPredicted RBP21.06■□□□□ 0.96
SHOX2-203ENST00000441443 PRICKLE1Q96MT3 831 aaPredicted RBP21.06■□□□□ 0.96
SHOX2-203ENST00000441443 C3orf70A6NLC5 250 aaPredicted RBP21.06■□□□□ 0.96
SHOX2-203ENST00000441443 ATP9BO43861 1147 aa21.06■□□□□ 0.96
SHOX2-203ENST00000441443 ZBTB7AO95365 584 aa21.06■□□□□ 0.96
SHOX2-203ENST00000441443 VNN1O95497 513 aa21.06■□□□□ 0.96
SHOX2-203ENST00000441443 SH3BGRP55822 239 aaPredicted RBP21.06■□□□□ 0.96
SHOX2-203ENST00000441443 LRRC38Q5VT99 294 aa21.06■□□□□ 0.96
SHOX2-203ENST00000441443 SLC26A11Q86WA9 606 aa21.06■□□□□ 0.96
SHOX2-203ENST00000441443 HPS6Q86YV9 775 aa21.06■□□□□ 0.96
SHOX2-203ENST00000441443 RBM12BQ8IXT5 1001 aaKnown RBP21.06■□□□□ 0.96
SHOX2-203ENST00000441443 ICA1LQ8NDH6 482 aa21.06■□□□□ 0.96
SHOX2-203ENST00000441443 CAMKK2Q96RR4 588 aa21.06■□□□□ 0.96
SHOX2-203ENST00000441443 SIRPGQ9P1W8 387 aa21.06■□□□□ 0.96
SHOX2-203ENST00000441443 SDR42E2A6NKP2 422 aa21.05■□□□□ 0.96
SHOX2-203ENST00000441443 LYPLA1O75608 230 aaPredicted RBP21.05■□□□□ 0.96
SHOX2-203ENST00000441443 TFAP2AP05549 437 aa21.05■□□□□ 0.96
SHOX2-203ENST00000441443 TPP2P29144 1249 aaPredicted RBP21.05■□□□□ 0.96
SHOX2-203ENST00000441443 HPCAP84074 193 aa21.05■□□□□ 0.96
SHOX2-203ENST00000441443 DPYSL3Q14195 570 aa21.05■□□□□ 0.96
SHOX2-203ENST00000441443 TLR1Q15399 786 aa21.05■□□□□ 0.96
SHOX2-203ENST00000441443 ZACNQ401N2 412 aa21.05■□□□□ 0.96
SHOX2-203ENST00000441443 KLHDC10Q6PID8 442 aa21.05■□□□□ 0.96
SHOX2-203ENST00000441443 USP29Q9HBJ7 922 aa21.05■□□□□ 0.96
SHOX2-203ENST00000441443 PTTG2Q9NZH5 202 aa21.05■□□□□ 0.96
SHOX2-203ENST00000441443 MYOCOSA0A1B0GUC4 107 aa21.05■□□□□ 0.96
SHOX2-203ENST00000441443 PIM1P11309 404 aaPredicted RBP21.05■□□□□ 0.96
SHOX2-203ENST00000441443 TKFCQ3LXA3 575 aa21.05■□□□□ 0.96
SHOX2-203ENST00000441443 ACBD5Q5T8D3 534 aaPredicted RBP21.05■□□□□ 0.96
SHOX2-203ENST00000441443 WNK4Q96J92 1243 aa21.05■□□□□ 0.96
SHOX2-203ENST00000441443 TEX264Q9Y6I9 313 aa21.05■□□□□ 0.96
SHOX2-203ENST00000441443 LOC100653049A0A140TA62 436 aa21.04■□□□□ 0.96
SHOX2-203ENST00000441443 TOM1L1O75674 476 aa21.04■□□□□ 0.96
SHOX2-203ENST00000441443 KRT34O76011 436 aa21.04■□□□□ 0.96
SHOX2-203ENST00000441443 CLPTM1O96005 669 aa21.04■□□□□ 0.96
SHOX2-203ENST00000441443 SNRPAP09012 282 aaKnown RBP21.04■□□□□ 0.96
SHOX2-203ENST00000441443 IL1R2P27930 398 aa21.04■□□□□ 0.96
SHOX2-203ENST00000441443 MRPS9P82933 396 aaKnown RBP21.04■□□□□ 0.96
SHOX2-203ENST00000441443 PAOXQ6QHF9 649 aa21.04■□□□□ 0.96
SHOX2-203ENST00000441443 B3GNT6Q6ZMB0 384 aa21.04■□□□□ 0.96
SHOX2-203ENST00000441443 TMC7Q7Z402 723 aa21.04■□□□□ 0.96
SHOX2-203ENST00000441443 TRIM42Q8IWZ5 723 aa21.04■□□□□ 0.96
SHOX2-203ENST00000441443 METTL25Q8N6Q8 603 aa21.04■□□□□ 0.96
SHOX2-203ENST00000441443 GRIP2Q9C0E4 1043 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms