RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 SLC5A3P53794 718 aa19.96■□□□□ 0.79
SNX17-203ENST00000440760 YWHAZP63104 245 aaKnown RBP19.96■□□□□ 0.79
SNX17-203ENST00000440760 ACAP1Q15027 740 aa19.96■□□□□ 0.79
SNX17-203ENST00000440760 SYPL2Q5VXT5 272 aa19.96■□□□□ 0.79
SNX17-203ENST00000440760 SPOCD1Q6ZMY3 1216 aa19.96■□□□□ 0.79
SNX17-203ENST00000440760 RBM41Q96IZ5 413 aaKnown RBP19.96■□□□□ 0.79
SNX17-203ENST00000440760 FAM118BQ9BPY3 351 aa19.96■□□□□ 0.79
SNX17-203ENST00000440760 DDX23Q9BUQ8 820 aaKnown RBP19.96■□□□□ 0.79
SNX17-203ENST00000440760 CNGB3Q9NQW8 809 aa19.96■□□□□ 0.79
SNX17-203ENST00000440760 CXXC1Q9P0U4 656 aaPredicted RBP19.96■□□□□ 0.79
SNX17-203ENST00000440760 NAALADL1Q9UQQ1 740 aa19.96■□□□□ 0.79
SNX17-203ENST00000440760 OR6C75A6NL08 312 aa19.95■□□□□ 0.78
SNX17-203ENST00000440760 FSCN2O14926 492 aa19.95■□□□□ 0.78
SNX17-203ENST00000440760 ADAM12O43184 909 aa19.95■□□□□ 0.78
SNX17-203ENST00000440760 CAPN15O75808 1086 aa19.95■□□□□ 0.78
SNX17-203ENST00000440760 FBXO21O94952 628 aa19.95■□□□□ 0.78
SNX17-203ENST00000440760 EFEMP2O95967 443 aa19.95■□□□□ 0.78
SNX17-203ENST00000440760 KRT7P08729 469 aa19.95■□□□□ 0.78
SNX17-203ENST00000440760 H2AFXP16104 143 aaPredicted RBP19.95■□□□□ 0.78
SNX17-203ENST00000440760 MATKP42679 507 aa19.95■□□□□ 0.78
SNX17-203ENST00000440760 PPIGQ13427 754 aaKnown RBP eCLIP19.95■□□□□ 0.781e-6■■■□□ 14.9
SNX17-203ENST00000440760 DDR2Q16832 855 aa19.95■□□□□ 0.78
SNX17-203ENST00000440760 ODF2Q5BJF6 829 aa19.95■□□□□ 0.78
SNX17-203ENST00000440760 ATG4AQ8WYN0 398 aa19.95■□□□□ 0.78
SNX17-203ENST00000440760 RIN2Q8WYP3 895 aaPredicted RBP19.95■□□□□ 0.78
SNX17-203ENST00000440760 ZNF558Q96NG5 402 aa19.95■□□□□ 0.78
SNX17-203ENST00000440760 CRISPLD1Q9H336 500 aa19.95■□□□□ 0.78
SNX17-203ENST00000440760 DDX56Q9NY93 547 aaKnown RBP19.95■□□□□ 0.78
SNX17-203ENST00000440760 R3HDM2Q9Y2K5 976 aaKnown RBP19.95■□□□□ 0.78
SNX17-203ENST00000440760 CDY1Q9Y6F8 540 aa19.95■□□□□ 0.78
SNX17-203ENST00000440760 SYNJ2BP-COX16A0A087WUM0 186 aa19.95■□□□□ 0.78
SNX17-203ENST00000440760 C3orf70A6NLC5 250 aaPredicted RBP19.95■□□□□ 0.78
SNX17-203ENST00000440760 PRPSAP2O60256 369 aa19.95■□□□□ 0.78
SNX17-203ENST00000440760 TBC1D4O60343 1298 aa19.95■□□□□ 0.78
SNX17-203ENST00000440760 VNN2O95498 520 aa19.95■□□□□ 0.78
SNX17-203ENST00000440760 FYNP06241 537 aa19.95■□□□□ 0.78
SNX17-203ENST00000440760 NFE2Q16621 373 aaPredicted RBP19.95■□□□□ 0.78
SNX17-203ENST00000440760 CCDC70Q6NSX1 233 aa19.95■□□□□ 0.78
SNX17-203ENST00000440760 TTC27Q6P3X3 843 aa19.95■□□□□ 0.78
SNX17-203ENST00000440760 RNF19BQ6ZMZ0 732 aa19.95■□□□□ 0.78
SNX17-203ENST00000440760 ANKS3Q6ZW76 656 aa19.95■□□□□ 0.78
SNX17-203ENST00000440760 ARCQ7LC44 396 aa19.95■□□□□ 0.78
SNX17-203ENST00000440760 GSPT2Q8IYD1 628 aaKnown RBP19.95■□□□□ 0.78
SNX17-203ENST00000440760 CMTR2Q8IYT2 770 aaKnown RBP19.95■□□□□ 0.78
SNX17-203ENST00000440760 RCOR2Q8IZ40 523 aa19.95■□□□□ 0.78
SNX17-203ENST00000440760 COLGALT1Q8NBJ5 622 aa19.95■□□□□ 0.78
SNX17-203ENST00000440760 C1orf54Q8WWF1 131 aa19.95■□□□□ 0.78
SNX17-203ENST00000440760 UBXN6Q9BZV1 441 aa19.95■□□□□ 0.78
SNX17-203ENST00000440760 POPDC2Q9HBU9 364 aa19.95■□□□□ 0.78
SNX17-203ENST00000440760 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.95■□□□□ 0.78
SNX17-203ENST00000440760 COX16Q9P0S2 106 aa19.95■□□□□ 0.78
SNX17-203ENST00000440760 PCDHB5Q9Y5E4 795 aa19.95■□□□□ 0.78
SNX17-203ENST00000440760 ESYT3A0FGR9 886 aa19.94■□□□□ 0.78
SNX17-203ENST00000440760 MTMR11A4FU01 709 aa19.94■□□□□ 0.78
SNX17-203ENST00000440760 PHF2O75151 1096 aa19.94■□□□□ 0.78
SNX17-203ENST00000440760 HEXIM1O94992 359 aaKnown RBP19.94■□□□□ 0.78
SNX17-203ENST00000440760 GLI1P08151 1106 aa19.94■□□□□ 0.78
SNX17-203ENST00000440760 CDKN2BP42772 138 aa19.94■□□□□ 0.78
SNX17-203ENST00000440760 KLF1Q13351 362 aaPredicted RBP19.94■□□□□ 0.78
SNX17-203ENST00000440760 CLUL1Q15846 466 aa19.94■□□□□ 0.78
SNX17-203ENST00000440760 RNF168Q8IYW5 571 aaPredicted RBP19.94■□□□□ 0.78
SNX17-203ENST00000440760 SLC39A11Q8N1S5 342 aa19.94■□□□□ 0.78
SNX17-203ENST00000440760 ADAM32Q8TC27 787 aa19.94■□□□□ 0.78
SNX17-203ENST00000440760 GPR152Q8TDT2 470 aa19.94■□□□□ 0.78
SNX17-203ENST00000440760 EDEM1Q92611 657 aa19.94■□□□□ 0.78
SNX17-203ENST00000440760 SLC2A13Q96QE2 648 aa19.94■□□□□ 0.78
SNX17-203ENST00000440760 CHST7Q9NS84 486 aa19.94■□□□□ 0.78
SNX17-203ENST00000440760 SLC27A5Q9Y2P5 690 aa19.94■□□□□ 0.78
SNX17-203ENST00000440760 hCG_1818297A0A087WSY0 165 aa19.94■□□□□ 0.78
SNX17-203ENST00000440760 TARSL2A2RTX5 802 aaKnown RBP19.94■□□□□ 0.78
SNX17-203ENST00000440760 TTI1O43156 1089 aa19.94■□□□□ 0.78
SNX17-203ENST00000440760 FGBP02675 491 aa19.94■□□□□ 0.78
SNX17-203ENST00000440760 LTFP02788 710 aa19.94■□□□□ 0.78
SNX17-203ENST00000440760 CLCN6P51797 869 aa19.94■□□□□ 0.78
SNX17-203ENST00000440760 USP41Q3LFD5 358 aa19.94■□□□□ 0.78
SNX17-203ENST00000440760 ZC3H12AQ5D1E8 599 aaKnown RBP19.94■□□□□ 0.78
SNX17-203ENST00000440760 FUBP3Q96I24 572 aaKnown RBP eCLIP19.94■□□□□ 0.78
SNX17-203ENST00000440760 SNRNP25Q9BV90 132 aaKnown RBP19.94■□□□□ 0.78
SNX17-203ENST00000440760 PNPLA8Q9NP80 782 aa19.94■□□□□ 0.78
SNX17-203ENST00000440760 STIM2Q9P246 746 aa19.94■□□□□ 0.78
SNX17-203ENST00000440760 RAB21Q9UL25 225 aa19.94■□□□□ 0.78
SNX17-203ENST00000440760 MTUS1Q9ULD2 1270 aa19.94■□□□□ 0.78
SNX17-203ENST00000440760 ZMYND8Q9ULU4 1186 aaPredicted RBP19.94■□□□□ 0.78
SNX17-203ENST00000440760 H7C4K7 107 aa19.93■□□□□ 0.78
SNX17-203ENST00000440760 TNFRSF10BO14763 440 aa19.93■□□□□ 0.78
SNX17-203ENST00000440760 KDELR1P24390 212 aa19.93■□□□□ 0.78
SNX17-203ENST00000440760 SNX1Q13596 522 aa19.93■□□□□ 0.78
SNX17-203ENST00000440760 PSMD5Q16401 504 aa19.93■□□□□ 0.78
SNX17-203ENST00000440760 CA9Q16790 459 aa19.93■□□□□ 0.78
SNX17-203ENST00000440760 FAM131BQ86XD5 332 aa19.93■□□□□ 0.78
SNX17-203ENST00000440760 CCDC185Q8N715 623 aa19.93■□□□□ 0.78
SNX17-203ENST00000440760 CENPIQ92674 756 aaPredicted RBP19.93■□□□□ 0.78
SNX17-203ENST00000440760 MAGOHBQ96A72 148 aaKnown RBP19.93■□□□□ 0.78
SNX17-203ENST00000440760 HAUS1Q96CS2 278 aa19.93■□□□□ 0.78
SNX17-203ENST00000440760 TMEM169Q96HH4 297 aa19.93■□□□□ 0.78
SNX17-203ENST00000440760 CAPN9O14815 690 aa19.92■□□□□ 0.78
SNX17-203ENST00000440760 MYBL2P10244 700 aa19.92■□□□□ 0.78
SNX17-203ENST00000440760 DESP17661 470 aa19.92■□□□□ 0.78
SNX17-203ENST00000440760 LAG3P18627 525 aa19.92■□□□□ 0.78
SNX17-203ENST00000440760 NOS2P35228 1153 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms