RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 CFAP97Q9P2B7 532 aa24.91■■□□□ 1.58
VARS-217ENST00000440048 WDR87Q6ZQQ6 2873 aa24.91■■□□□ 1.58
VARS-217ENST00000440048 A0A1W2PQH9 124 aa24.9■■□□□ 1.58
VARS-217ENST00000440048 XPO1O14980 1071 aaKnown RBP24.9■■□□□ 1.58
VARS-217ENST00000440048 CALCAP01258 141 aa24.9■■□□□ 1.58
VARS-217ENST00000440048 BST2Q10589 180 aaKnown RBP24.9■■□□□ 1.58
VARS-217ENST00000440048 RAB41Q5JT25 222 aa24.9■■□□□ 1.58
VARS-217ENST00000440048 GJB7Q6PEY0 223 aa24.9■■□□□ 1.58
VARS-217ENST00000440048 LCLAT1Q6UWP7 414 aa24.9■■□□□ 1.58
VARS-217ENST00000440048 SCD5Q86SK9 330 aa24.9■■□□□ 1.58
VARS-217ENST00000440048 DDX42Q86XP3 938 aaKnown RBP eCLIP24.9■■□□□ 1.58
VARS-217ENST00000440048 KIAA1958Q8N8K9 716 aa24.9■■□□□ 1.58
VARS-217ENST00000440048 ATP2A3Q93084 1043 aa24.9■■□□□ 1.58
VARS-217ENST00000440048 ZSWIM1Q9BR11 485 aa24.9■■□□□ 1.58
VARS-217ENST00000440048 ECT2Q9H8V3 914 aa24.9■■□□□ 1.58
VARS-217ENST00000440048 LMAN1LQ9HAT1 526 aa24.9■■□□□ 1.58
VARS-217ENST00000440048 CYLDQ9NQC7 956 aa24.9■■□□□ 1.58
VARS-217ENST00000440048 CNTN6Q9UQ52 1028 aa24.9■■□□□ 1.58
VARS-217ENST00000440048 NFE2L3Q9Y4A8 694 aa24.9■■□□□ 1.58
VARS-217ENST00000440048 KCNJ18B7U540 433 aa24.89■■□□□ 1.58
VARS-217ENST00000440048 TBX18O95935 607 aa24.89■■□□□ 1.58
VARS-217ENST00000440048 CHRNB1P11230 501 aa24.89■■□□□ 1.58
VARS-217ENST00000440048 PRKCSHP14314 528 aaPredicted RBP24.89■■□□□ 1.58
VARS-217ENST00000440048 BRD2P25440 801 aaKnown RBP24.89■■□□□ 1.58
VARS-217ENST00000440048 PON1P27169 355 aa24.89■■□□□ 1.58
VARS-217ENST00000440048 APBA1Q02410 837 aa24.89■■□□□ 1.58
VARS-217ENST00000440048 KCNJ12Q14500 433 aa24.89■■□□□ 1.58
VARS-217ENST00000440048 PON2Q15165 354 aa24.89■■□□□ 1.58
VARS-217ENST00000440048 CNGA2Q16280 664 aa24.89■■□□□ 1.58
VARS-217ENST00000440048 VWA3BQ502W6 1294 aa24.89■■□□□ 1.58
VARS-217ENST00000440048 PKDCCQ504Y2 493 aa24.89■■□□□ 1.58
VARS-217ENST00000440048 MIIPQ5JXC2 388 aa24.89■■□□□ 1.58
VARS-217ENST00000440048 ENOSF1Q7L5Y1 443 aa24.89■■□□□ 1.58
VARS-217ENST00000440048 C1orf210Q8IVY1 113 aa24.89■■□□□ 1.58
VARS-217ENST00000440048 CPA6Q8N4T0 437 aa24.89■■□□□ 1.58
VARS-217ENST00000440048 CHFRQ96EP1 664 aa24.89■■□□□ 1.58
VARS-217ENST00000440048 NACA2Q9H009 215 aa24.89■■□□□ 1.58
VARS-217ENST00000440048 NDST4Q9H3R1 872 aa24.89■■□□□ 1.58
VARS-217ENST00000440048 ANO10Q9NW15 660 aa24.89■■□□□ 1.58
VARS-217ENST00000440048 FAM186AA6NE01 2351 aa24.88■■□□□ 1.57
VARS-217ENST00000440048 SCAMP3O14828 347 aaKnown RBP24.88■■□□□ 1.57
VARS-217ENST00000440048 RARGP13631 454 aa24.88■■□□□ 1.57
VARS-217ENST00000440048 KRT5P13647 590 aa24.88■■□□□ 1.57
VARS-217ENST00000440048 MFAP3P55082 362 aa24.88■■□□□ 1.57
VARS-217ENST00000440048 C11orf57Q6ZUT1 292 aaPredicted RBP24.88■■□□□ 1.57
VARS-217ENST00000440048 PHOX2BQ99453 314 aa24.88■■□□□ 1.57
VARS-217ENST00000440048 FAM86C1Q9NVL1 165 aa24.88■■□□□ 1.57
VARS-217ENST00000440048 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.88■■□□□ 1.57
VARS-217ENST00000440048 SPATA6Q9NWH7 488 aaPredicted RBP24.88■■□□□ 1.57
VARS-217ENST00000440048 TMEM63CQ9P1W3 806 aa24.88■■□□□ 1.57
VARS-217ENST00000440048 APEX2Q9UBZ4 518 aa24.88■■□□□ 1.57
VARS-217ENST00000440048 NAGPAQ9UK23 515 aa24.88■■□□□ 1.57
VARS-217ENST00000440048 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.88■■□□□ 1.57
VARS-217ENST00000440048 USP34Q70CQ2 3546 aa24.87■■□□□ 1.57
VARS-217ENST00000440048 PROB1E7EW31 1015 aa24.87■■□□□ 1.57
VARS-217ENST00000440048 SETSIPP0DME0 302 aa24.87■■□□□ 1.57
VARS-217ENST00000440048 GJA4P35212 333 aa24.87■■□□□ 1.57
VARS-217ENST00000440048 PLA2G4AP47712 749 aa24.87■■□□□ 1.57
VARS-217ENST00000440048 PSEN1P49768 467 aa24.87■■□□□ 1.57
VARS-217ENST00000440048 TKTL1P51854 596 aa24.87■■□□□ 1.57
VARS-217ENST00000440048 STILQ15468 1287 aa24.87■■□□□ 1.57
VARS-217ENST00000440048 STX1AQ16623 288 aa24.87■■□□□ 1.57
VARS-217ENST00000440048 TCP11X2Q5H9J9 407 aa24.87■■□□□ 1.57
VARS-217ENST00000440048 FAM81BQ96LP2 452 aa24.87■■□□□ 1.57
VARS-217ENST00000440048 CHRDQ9H2X0 955 aa24.87■■□□□ 1.57
VARS-217ENST00000440048 SIX2Q9NPC8 291 aa24.87■■□□□ 1.57
VARS-217ENST00000440048 MYOFQ9NZM1 2061 aa24.87■■□□□ 1.57
VARS-217ENST00000440048 VPS13AQ96RL7 3174 aa24.87■■□□□ 1.57
VARS-217ENST00000440048 E2F8A0AVK6 867 aa24.86■■□□□ 1.57
VARS-217ENST00000440048 SLC9A3R1O14745 358 aaPredicted RBP24.86■■□□□ 1.57
VARS-217ENST00000440048 NFATC1O95644 943 aa24.86■■□□□ 1.57
VARS-217ENST00000440048 EEF1GP26641 437 aaKnown RBP24.86■■□□□ 1.57
VARS-217ENST00000440048 ATP5C1P36542 298 aaKnown RBP24.86■■□□□ 1.57
VARS-217ENST00000440048 NBL1P41271 181 aa24.86■■□□□ 1.57
VARS-217ENST00000440048 AMPD2Q01433 879 aa24.86■■□□□ 1.57
VARS-217ENST00000440048 ARHGAP44Q17R89 818 aa24.86■■□□□ 1.57
VARS-217ENST00000440048 KLF16Q9BXK1 252 aaPredicted RBP24.86■■□□□ 1.57
VARS-217ENST00000440048 ULBP1Q9BZM6 244 aa24.86■■□□□ 1.57
VARS-217ENST00000440048 LRRC4Q9HBW1 653 aa24.86■■□□□ 1.57
VARS-217ENST00000440048 RBM12Q9NTZ6 932 aaKnown RBP24.86■■□□□ 1.57
VARS-217ENST00000440048 CLIC5Q9NZA1 410 aa24.86■■□□□ 1.57
VARS-217ENST00000440048 NUDT5Q9UKK9 219 aa24.86■■□□□ 1.57
VARS-217ENST00000440048 M0QYV0 167 aa24.85■■□□□ 1.57
VARS-217ENST00000440048 IRF1P10914 325 aa24.85■■□□□ 1.57
VARS-217ENST00000440048 MTAPQ13126 283 aa24.85■■□□□ 1.57
VARS-217ENST00000440048 NR1H3Q13133 447 aa24.85■■□□□ 1.57
VARS-217ENST00000440048 LRRC32Q14392 662 aa24.85■■□□□ 1.57
VARS-217ENST00000440048 C10orf120Q5SQS8 335 aa24.85■■□□□ 1.57
VARS-217ENST00000440048 PM20D1Q6GTS8 502 aa24.85■■□□□ 1.57
VARS-217ENST00000440048 KLHDC10Q6PID8 442 aa24.85■■□□□ 1.57
VARS-217ENST00000440048 MAML2Q8IZL2 1156 aaPredicted RBP24.85■■□□□ 1.57
VARS-217ENST00000440048 ZNF276Q8N554 614 aa24.85■■□□□ 1.57
VARS-217ENST00000440048 SLC35F5Q8WV83 523 aa24.85■■□□□ 1.57
VARS-217ENST00000440048 KCTD13Q8WZ19 329 aa24.85■■□□□ 1.57
VARS-217ENST00000440048 NDRG1Q92597 394 aaKnown RBP24.85■■□□□ 1.57
VARS-217ENST00000440048 SECISBP2LQ93073 1101 aaKnown RBP24.85■■□□□ 1.57
VARS-217ENST00000440048 WBP2Q969T9 261 aa24.85■■□□□ 1.57
VARS-217ENST00000440048 SH3BP1Q9Y3L3 701 aa24.85■■□□□ 1.57
VARS-217ENST00000440048 BECN2A8MW95 431 aa24.84■■□□□ 1.57
VARS-217ENST00000440048 TRDMT1O14717 391 aaKnown RBP24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms