RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 TMEM174Q8WUU8 243 aa8.92□□□□□ -0.98
HPS4-206ENST00000439453 TRIM11Q96F44 468 aa8.92□□□□□ -0.98
HPS4-206ENST00000439453 DHRS4Q9BTZ2 278 aa8.92□□□□□ -0.98
HPS4-206ENST00000439453 THTPAQ9BU02 230 aa8.92□□□□□ -0.98
HPS4-206ENST00000439453 GPAMQ9HCL2 828 aa8.92□□□□□ -0.98
HPS4-206ENST00000439453 MAP3K20Q9NYL2 800 aaKnown RBP8.92□□□□□ -0.98
HPS4-206ENST00000439453 PLA2G4CQ9UP65 541 aa8.92□□□□□ -0.98
HPS4-206ENST00000439453 SHOC2Q9UQ13 582 aa8.92□□□□□ -0.98
HPS4-206ENST00000439453 CAPN14A8MX76 684 aa8.92□□□□□ -0.98
HPS4-206ENST00000439453 LPXNO60711 386 aa8.92□□□□□ -0.98
HPS4-206ENST00000439453 DHRS4L1P0CG22 281 aa8.92□□□□□ -0.98
HPS4-206ENST00000439453 COL6A1P12109 1028 aa8.92□□□□□ -0.98
HPS4-206ENST00000439453 VAV1P15498 845 aa8.92□□□□□ -0.98
HPS4-206ENST00000439453 GLRA2P23416 452 aa8.92□□□□□ -0.98
HPS4-206ENST00000439453 MRPS9P82933 396 aaKnown RBP8.92□□□□□ -0.98
HPS4-206ENST00000439453 NFX1Q12986 1120 aaKnown RBP8.92□□□□□ -0.98
HPS4-206ENST00000439453 PGM5Q15124 567 aa8.92□□□□□ -0.98
HPS4-206ENST00000439453 KRT39Q6A163 491 aa8.92□□□□□ -0.98
HPS4-206ENST00000439453 RAPH1Q70E73 1250 aa8.92□□□□□ -0.98
HPS4-206ENST00000439453 NLRX1Q86UT6 975 aa8.92□□□□□ -0.98
HPS4-206ENST00000439453 SPATA24Q86W54 205 aa8.92□□□□□ -0.98
HPS4-206ENST00000439453 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.92□□□□□ -0.98
HPS4-206ENST00000439453 ETNK2Q9NVF9 386 aa8.92□□□□□ -0.98
HPS4-206ENST00000439453 KLHL11Q9NVR0 708 aa8.92□□□□□ -0.98
HPS4-206ENST00000439453 SIP14410 1827 aa8.92□□□□□ -0.98
HPS4-206ENST00000439453 DENND3A2RUS2 1198 aa8.92□□□□□ -0.98
HPS4-206ENST00000439453 PI4K2BG5E9Z4 385 aa8.92□□□□□ -0.98
HPS4-206ENST00000439453 GAS7O60861 476 aa8.92□□□□□ -0.98
HPS4-206ENST00000439453 CFBP00751 764 aa8.92□□□□□ -0.98
HPS4-206ENST00000439453 HARSP12081 509 aaKnown RBP8.92□□□□□ -0.98
HPS4-206ENST00000439453 SCNN1BP51168 640 aa8.92□□□□□ -0.98
HPS4-206ENST00000439453 GPC3P51654 580 aa8.92□□□□□ -0.98
HPS4-206ENST00000439453 ALCAMQ13740 583 aa8.92□□□□□ -0.98
HPS4-206ENST00000439453 MAP7Q14244 749 aa8.92□□□□□ -0.98
HPS4-206ENST00000439453 HIF1AQ16665 826 aa8.92□□□□□ -0.98
HPS4-206ENST00000439453 TMCO4Q5TGY1 634 aa8.92□□□□□ -0.98
HPS4-206ENST00000439453 C1orf146Q5VVC0 180 aa8.92□□□□□ -0.98
HPS4-206ENST00000439453 DRICH1Q6PGQ1 229 aaPredicted RBP8.92□□□□□ -0.98
HPS4-206ENST00000439453 SAMD3Q8N6K7 520 aa8.92□□□□□ -0.98
HPS4-206ENST00000439453 ATP11CQ8NB49 1132 aa8.92□□□□□ -0.98
HPS4-206ENST00000439453 PYROXD1Q8WU10 500 aa8.92□□□□□ -0.98
HPS4-206ENST00000439453 DCAKDQ8WVC6 231 aa8.92□□□□□ -0.98
HPS4-206ENST00000439453 TTC17Q96AE7 1141 aa8.92□□□□□ -0.98
HPS4-206ENST00000439453 CCDC127Q96BQ5 260 aa8.92□□□□□ -0.98
HPS4-206ENST00000439453 UPF3AQ9H1J1 476 aaKnown RBP8.92□□□□□ -0.98
HPS4-206ENST00000439453 SLC7A8Q9UHI5 535 aa8.92□□□□□ -0.98
HPS4-206ENST00000439453 SPECC1L-ADORA2AF8WAN1 911 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 MT-ND3P03897 115 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 ASLP04424 464 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 GRIA2P42262 883 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 USP46P62068 366 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 KLHL38Q2WGJ6 581 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 MDH1BQ5I0G3 518 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 ZFYVE27Q5T4F4 411 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 RASSF3Q86WH2 238 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 MCF2L2Q86YR7 1114 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 OR6Y1Q8NGX8 325 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 FAM111AQ96PZ2 611 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 PDCD2LQ9BRP1 358 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 ACSS3Q9H6R3 686 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 POLIQ9UNA4 740 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 ZSCAN9O15535 394 aaPredicted RBP8.91□□□□□ -0.98
HPS4-206ENST00000439453 IL1BP01584 269 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 FAM200BP0CF97 657 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 SMPD1P17405 629 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 ADCYAP1R1P41586 468 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 ETV4P43268 484 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 NSFP46459 744 aaKnown RBP8.91□□□□□ -0.98
HPS4-206ENST00000439453 INHBCP55103 352 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 ATP13A4Q4VNC1 1196 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 GJC2Q5T442 439 aaPredicted RBP8.91□□□□□ -0.98
HPS4-206ENST00000439453 PADI6Q6TGC4 694 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 C3orf62Q6ZUJ4 267 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 PDSS2Q86YH6 399 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 CBWD2Q8IUF1 395 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 TAS1R2Q8TE23 839 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 MTBPQ96DY7 904 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 LXNQ9BS40 222 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 UNC45AQ9H3U1 944 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 ABHD16BQ9H3Z7 469 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 ZDHHC7Q9NXF8 308 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 PPARGC1AQ9UBK2 798 aaKnown RBP8.91□□□□□ -0.98
HPS4-206ENST00000439453 DRG1Q9Y295 367 aaKnown RBP8.91□□□□□ -0.98
HPS4-206ENST00000439453 COQ4Q9Y3A0 265 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 E5RJQ4 531 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 FKBP6O75344 327 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 CAPN15O75808 1086 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 PIM1P11309 404 aaPredicted RBP8.91□□□□□ -0.98
HPS4-206ENST00000439453 ATF7P17544 494 aaPredicted RBP8.91□□□□□ -0.98
HPS4-206ENST00000439453 GAD2Q05329 585 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 KDSRQ06136 332 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 MED21Q13503 144 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 DNAL1Q4LDG9 190 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 LIN9Q5TKA1 542 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 SLC25A41Q8N5S1 370 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 KLHDC9Q8NEP7 349 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 TMEM8AQ9HCN3 771 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 KCNK4Q9NYG8 393 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 TAGLN3Q9UI15 199 aa8.91□□□□□ -0.98
HPS4-206ENST00000439453 STRIP2Q9ULQ0 834 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms