RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 NAB1Q13506 487 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 SMCO1Q147U7 214 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 ZNF772Q68DY9 489 aaPredicted RBP11.89□□□□□ -0.51
PTCH1-209ENST00000437951 LAYNQ6UX15 382 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 HPS1Q92902 700 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 DNAJC7Q99615 494 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 DCUN1D5Q9BTE7 237 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 THAP1Q9NVV9 213 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 AAR2Q9Y312 384 aaKnown RBP11.89□□□□□ -0.51
PTCH1-209ENST00000437951 SQORQ9Y6N5 450 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 ASXL2Q76L83 1435 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 PZPP20742 1482 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 IRGMA1A4Y4 181 aa11.88□□□□□ -0.51
PTCH1-209ENST00000437951 TCP10L2B9ZVM9 353 aa11.88□□□□□ -0.51
PTCH1-209ENST00000437951 EEF2KO00418 725 aaKnown RBP11.88□□□□□ -0.51
PTCH1-209ENST00000437951 VAC14Q08AM6 782 aa11.88□□□□□ -0.51
PTCH1-209ENST00000437951 DCAF4L1Q3SXM0 396 aa11.88□□□□□ -0.51
PTCH1-209ENST00000437951 MRNIPQ6NTE8 343 aa11.88□□□□□ -0.51
PTCH1-209ENST00000437951 CATSPER4Q7RTX7 472 aa11.88□□□□□ -0.51
PTCH1-209ENST00000437951 SEMA3DO95025 777 aa11.88□□□□□ -0.51
PTCH1-209ENST00000437951 RAG1P15918 1043 aa11.88□□□□□ -0.51
PTCH1-209ENST00000437951 OR2W6PQ8NHA6 318 aa11.88□□□□□ -0.51
PTCH1-209ENST00000437951 STOX2Q9P2F5 926 aaPredicted RBP11.88□□□□□ -0.51
PTCH1-209ENST00000437951 BCLAF3A2AJT9 711 aaKnown RBP11.88□□□□□ -0.51
PTCH1-209ENST00000437951 SORBS3O60504 671 aa11.88□□□□□ -0.51
PTCH1-209ENST00000437951 ME2P23368 584 aa11.88□□□□□ -0.51
PTCH1-209ENST00000437951 FUT11Q495W5 492 aa11.88□□□□□ -0.51
PTCH1-209ENST00000437951 PALB2Q86YC2 1186 aa11.88□□□□□ -0.51
PTCH1-209ENST00000437951 MINDY2Q8NBR6 621 aa11.88□□□□□ -0.51
PTCH1-209ENST00000437951 CCSER1Q9C0I3 900 aa11.88□□□□□ -0.51
PTCH1-209ENST00000437951 GPN1Q9HCN4 374 aaPredicted RBP11.88□□□□□ -0.51
PTCH1-209ENST00000437951 WWOXQ9NZC7 414 aa11.88□□□□□ -0.51
PTCH1-209ENST00000437951 PHF11Q9UIL8 331 aa11.88□□□□□ -0.51
PTCH1-209ENST00000437951 BNIP3LO60238 219 aa11.88□□□□□ -0.51
PTCH1-209ENST00000437951 ECE2O60344 883 aa11.88□□□□□ -0.51
PTCH1-209ENST00000437951 RASA1P20936 1047 aa11.88□□□□□ -0.51
PTCH1-209ENST00000437951 ADSSP30520 456 aa11.88□□□□□ -0.51
PTCH1-209ENST00000437951 C1orf131Q8NDD1 294 aaKnown RBP11.88□□□□□ -0.51
PTCH1-209ENST00000437951 CASKIN2Q8WXE0 1202 aa11.88□□□□□ -0.51
PTCH1-209ENST00000437951 KLHL32Q96NJ5 620 aa11.88□□□□□ -0.51
PTCH1-209ENST00000437951 CCNB1IP1Q9NPC3 277 aa11.88□□□□□ -0.51
PTCH1-209ENST00000437951 GUCY1A2P33402 732 aa11.88□□□□□ -0.51
PTCH1-209ENST00000437951 PRKAA1Q13131 559 aa11.88□□□□□ -0.51
PTCH1-209ENST00000437951 POLD3Q15054 466 aaPredicted RBP11.88□□□□□ -0.51
PTCH1-209ENST00000437951 KCTD21Q4G0X4 260 aa11.88□□□□□ -0.51
PTCH1-209ENST00000437951 CLHC1Q8NHS4 586 aa11.88□□□□□ -0.51
PTCH1-209ENST00000437951 PNPLA3Q9NST1 481 aa11.88□□□□□ -0.51
PTCH1-209ENST00000437951 ZNF222Q9UK12 451 aa11.88□□□□□ -0.51
PTCH1-209ENST00000437951 MAGEB16A2A368 324 aa11.88□□□□□ -0.51
PTCH1-209ENST00000437951 FAM47E-STBD1D6RA91 191 aa11.88□□□□□ -0.51
PTCH1-209ENST00000437951 GYG1P46976 350 aa11.88□□□□□ -0.51
PTCH1-209ENST00000437951 TOB2Q14106 344 aaPredicted RBP11.88□□□□□ -0.51
PTCH1-209ENST00000437951 RIN2Q8WYP3 895 aaPredicted RBP11.88□□□□□ -0.51
PTCH1-209ENST00000437951 PLEKHG4BQ96PX9 1271 aa11.88□□□□□ -0.51
PTCH1-209ENST00000437951 LBHD1Q9BQE6 289 aaPredicted RBP11.88□□□□□ -0.51
PTCH1-209ENST00000437951 SLC39A10Q9ULF5 831 aa11.88□□□□□ -0.51
PTCH1-209ENST00000437951 PCDHA6Q9UN73 950 aa11.88□□□□□ -0.51
PTCH1-209ENST00000437951 PCDHA8Q9Y5H6 950 aa11.88□□□□□ -0.51
PTCH1-209ENST00000437951 ATP10BO94823 1461 aa11.88□□□□□ -0.51
PTCH1-209ENST00000437951 MYH9P35579 1960 aaKnown RBP11.88□□□□□ -0.51
PTCH1-209ENST00000437951 SDR42E2A6NKP2 422 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 DYRK3O43781 588 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 MYCP01106 439 aaPredicted RBP11.87□□□□□ -0.51
PTCH1-209ENST00000437951 PTGER2P43116 358 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 FMO5P49326 533 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 CDK7P50613 346 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 ZNF746Q6NUN9 644 aaPredicted RBP11.87□□□□□ -0.51
PTCH1-209ENST00000437951 EEF1AKMT1Q8WVE0 214 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 TCF7L2Q9NQB0 619 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 FBXO40Q9UH90 709 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 IRAK3Q9Y616 596 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 A0A0A6YYK5 440 aaPredicted RBP11.87□□□□□ -0.51
PTCH1-209ENST00000437951 METTL21EPA6NDL7 271 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 RPS6KA5O75582 802 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 ZNF682O95780 498 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 RARBP10826 455 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 UCHL3P15374 230 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 CLEC16AQ2KHT3 1053 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 ZFP69Q49AA0 526 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 EIF1ADQ8N9N8 165 aaKnown RBP11.87□□□□□ -0.51
PTCH1-209ENST00000437951 COA7Q96BR5 231 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 OSBPL11Q9BXB4 747 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 ADPRHL2Q9NX46 363 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 BARHL2Q9NY43 387 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 CROTQ9UKG9 612 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 KPNA5O15131 536 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 UBDO15205 165 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 IL18RAPO95256 599 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 AKR1B1P15121 316 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 ATF6P18850 670 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 CDC25AP30304 524 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 PTPN7P35236 360 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 ABATP80404 500 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 OXNAD1Q96HP4 312 aaPredicted RBP11.87□□□□□ -0.51
PTCH1-209ENST00000437951 ZNF221Q9UK13 617 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 AGO2Q9UKV8 859 aaKnown RBP11.87□□□□□ -0.51
PTCH1-209ENST00000437951 BICRAQ9NZM4 1560 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 TPST1O60507 370 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 PSMG1O95456 288 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 CYBBP04839 570 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms