RNA–Protein interactions for RNA: ENST00000436554.5

LINC00271-202, long intergenic non-protein coding RNA 271, humanhuman

TSL 5 BASIC

Gene LINC00271, Length 655 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-202ENST00000436554 BBS7Q8IWZ6 715 aa12.3□□□□□ -0.44
LINC00271-202ENST00000436554 MDM1Q8TC05 714 aa12.3□□□□□ -0.44
LINC00271-202ENST00000436554 IPO4Q8TEX9 1081 aaKnown RBP12.3□□□□□ -0.44
LINC00271-202ENST00000436554 WBP2Q969T9 261 aa12.3□□□□□ -0.44
LINC00271-202ENST00000436554 DNAJC19Q96DA6 116 aa12.3□□□□□ -0.44
LINC00271-202ENST00000436554 ZFRQ96KR1 1074 aaKnown RBP12.3□□□□□ -0.44
LINC00271-202ENST00000436554 SLITRK1Q96PX8 696 aa12.3□□□□□ -0.44
LINC00271-202ENST00000436554 ACOX2Q99424 681 aa12.3□□□□□ -0.44
LINC00271-202ENST00000436554 SNX25Q9H3E2 840 aa12.3□□□□□ -0.44
LINC00271-202ENST00000436554 FAM124BQ9H5Z6 455 aaPredicted RBP12.3□□□□□ -0.44
LINC00271-202ENST00000436554 SPHK2Q9NRA0 654 aa12.3□□□□□ -0.44
LINC00271-202ENST00000436554 TMEM30AQ9NV96 361 aa12.3□□□□□ -0.44
LINC00271-202ENST00000436554 SEL1LQ9UBV2 794 aa12.3□□□□□ -0.44
LINC00271-202ENST00000436554 SH3BP1Q9Y3L3 701 aa12.3□□□□□ -0.44
LINC00271-202ENST00000436554 STARD13Q9Y3M8 1113 aa12.3□□□□□ -0.44
LINC00271-202ENST00000436554 ADAMTS9Q9P2N4 1935 aa12.3□□□□□ -0.44
LINC00271-202ENST00000436554 ITPR1Q14643 2758 aa12.3□□□□□ -0.44
LINC00271-202ENST00000436554 CLDN5O00501 218 aa12.29□□□□□ -0.44
LINC00271-202ENST00000436554 HOXC11O43248 304 aaPredicted RBP12.29□□□□□ -0.44
LINC00271-202ENST00000436554 NDUFS2O75306 463 aa12.29□□□□□ -0.44
LINC00271-202ENST00000436554 ZIC2O95409 532 aaPredicted RBP12.29□□□□□ -0.44
LINC00271-202ENST00000436554 CST3P01034 146 aaPredicted RBP12.29□□□□□ -0.44
LINC00271-202ENST00000436554 TNNC2P02585 160 aa12.29□□□□□ -0.44
LINC00271-202ENST00000436554 GAP43P17677 238 aa12.29□□□□□ -0.44
LINC00271-202ENST00000436554 PTPN1P18031 435 aaKnown RBP12.29□□□□□ -0.44
LINC00271-202ENST00000436554 NDUFV2P19404 249 aa12.29□□□□□ -0.44
LINC00271-202ENST00000436554 YWHAQP27348 245 aa12.29□□□□□ -0.44
LINC00271-202ENST00000436554 PREPLQ4J6C6 727 aaPredicted RBP12.29□□□□□ -0.44
LINC00271-202ENST00000436554 EGFLAMQ63HQ2 1017 aa12.29□□□□□ -0.44
LINC00271-202ENST00000436554 SDE2Q6IQ49 451 aa12.29□□□□□ -0.44
LINC00271-202ENST00000436554 NAXDQ8IW45 347 aa12.29□□□□□ -0.44
LINC00271-202ENST00000436554 NUP93Q8N1F7 819 aa12.29□□□□□ -0.44
LINC00271-202ENST00000436554 TERB1Q8NA31 727 aa12.29□□□□□ -0.44
LINC00271-202ENST00000436554 SPRYD3Q8NCJ5 442 aa12.29□□□□□ -0.44
LINC00271-202ENST00000436554 OR6B3Q8NGW1 331 aa12.29□□□□□ -0.44
LINC00271-202ENST00000436554 OTUB2Q96DC9 234 aa12.29□□□□□ -0.44
LINC00271-202ENST00000436554 LRIG1Q96JA1 1093 aa12.29□□□□□ -0.44
LINC00271-202ENST00000436554 BBC3Q96PG8 261 aaPredicted RBP12.29□□□□□ -0.44
LINC00271-202ENST00000436554 B3GNT5Q9BYG0 378 aa12.29□□□□□ -0.44
LINC00271-202ENST00000436554 FGFBP2Q9BYJ0 223 aa12.29□□□□□ -0.44
LINC00271-202ENST00000436554 ZNF518BQ9C0D4 1074 aa12.29□□□□□ -0.44
LINC00271-202ENST00000436554 SLC6A17Q9H1V8 727 aa12.29□□□□□ -0.44
LINC00271-202ENST00000436554 CD248Q9HCU0 757 aa12.29□□□□□ -0.44
LINC00271-202ENST00000436554 CD93Q9NPY3 652 aa12.29□□□□□ -0.44
LINC00271-202ENST00000436554 RAXQ9Y2V3 346 aa12.29□□□□□ -0.44
LINC00271-202ENST00000436554 PTPRJQ12913 1337 aa12.29□□□□□ -0.44
LINC00271-202ENST00000436554 TNRC6BQ9UPQ9 1833 aaKnown RBP12.28□□□□□ -0.44
LINC00271-202ENST00000436554 ASXL3Q9C0F0 2248 aa12.28□□□□□ -0.44
LINC00271-202ENST00000436554 ZNF233A6NK53 670 aa12.28□□□□□ -0.44
LINC00271-202ENST00000436554 PRPF6O94906 941 aaKnown RBP12.28□□□□□ -0.44
LINC00271-202ENST00000436554 GNSP15586 552 aa12.28□□□□□ -0.44
LINC00271-202ENST00000436554 GJB2P29033 226 aa12.28□□□□□ -0.44
LINC00271-202ENST00000436554 SF3A1Q15459 793 aaKnown RBP12.28□□□□□ -0.44
LINC00271-202ENST00000436554 HECTD3Q5T447 861 aa12.28□□□□□ -0.44
LINC00271-202ENST00000436554 SYCP2LQ5T4T6 812 aa12.28□□□□□ -0.44
LINC00271-202ENST00000436554 TOGARAM2Q6ZUX3 1019 aa12.28□□□□□ -0.44
LINC00271-202ENST00000436554 SV2BQ7L1I2 683 aa12.28□□□□□ -0.44
LINC00271-202ENST00000436554 CHPFQ8IZ52 775 aa12.28□□□□□ -0.44
LINC00271-202ENST00000436554 GPD1LQ8N335 351 aa12.28□□□□□ -0.44
LINC00271-202ENST00000436554 SCAMP5Q8TAC9 235 aa12.28□□□□□ -0.44
LINC00271-202ENST00000436554 FBXO32Q969P5 355 aa12.28□□□□□ -0.44
LINC00271-202ENST00000436554 KCNK16Q96T55 309 aa12.28□□□□□ -0.44
LINC00271-202ENST00000436554 BACH2Q9BYV9 841 aa12.28□□□□□ -0.44
LINC00271-202ENST00000436554 DPEP3Q9H4B8 488 aa12.28□□□□□ -0.44
LINC00271-202ENST00000436554 CCSER2Q9H7U1 834 aa12.28□□□□□ -0.44
LINC00271-202ENST00000436554 APOBEC2Q9Y235 224 aaKnown RBP12.28□□□□□ -0.44
LINC00271-202ENST00000436554 RAD54BQ9Y620 910 aa12.28□□□□□ -0.44
LINC00271-202ENST00000436554 CELSR3Q9NYQ7 3312 aa12.28□□□□□ -0.44
LINC00271-202ENST00000436554 SMG1Q96Q15 3661 aaKnown RBP12.27□□□□□ -0.45
LINC00271-202ENST00000436554 WASH3PC4AMC7 463 aa12.27□□□□□ -0.45
LINC00271-202ENST00000436554 PRRT4C9JH25 899 aa12.27□□□□□ -0.45
LINC00271-202ENST00000436554 CBFA2T3O75081 653 aa12.27□□□□□ -0.45
LINC00271-202ENST00000436554 TACC1O75410 805 aa12.27□□□□□ -0.45
LINC00271-202ENST00000436554 BMP15O95972 392 aa12.27□□□□□ -0.45
LINC00271-202ENST00000436554 IDEP14735 1019 aa12.27□□□□□ -0.45
LINC00271-202ENST00000436554 GRIK2Q13002 908 aa12.27□□□□□ -0.45
LINC00271-202ENST00000436554 SURF1Q15526 300 aa12.27□□□□□ -0.45
LINC00271-202ENST00000436554 WDR45BQ5MNZ6 344 aa12.27□□□□□ -0.45
LINC00271-202ENST00000436554 RRAGBQ5VZM2 374 aa12.27□□□□□ -0.45
LINC00271-202ENST00000436554 GRAMD4Q6IC98 578 aa12.27□□□□□ -0.45
LINC00271-202ENST00000436554 TRAPPC11Q7Z392 1133 aa12.27□□□□□ -0.45
LINC00271-202ENST00000436554 CBWD2Q8IUF1 395 aa12.27□□□□□ -0.45
LINC00271-202ENST00000436554 PDZD8Q8NEN9 1154 aa12.27□□□□□ -0.45
LINC00271-202ENST00000436554 SETD7Q8WTS6 366 aaKnown RBP12.27□□□□□ -0.45
LINC00271-202ENST00000436554 FOXJ1Q92949 421 aa12.27□□□□□ -0.45
LINC00271-202ENST00000436554 MRGPRX1Q96LB2 322 aa12.27□□□□□ -0.45
LINC00271-202ENST00000436554 ELOVL4Q9GZR5 314 aa12.27□□□□□ -0.45
LINC00271-202ENST00000436554 DNAJC17Q9NVM6 304 aaKnown RBP12.27□□□□□ -0.45
LINC00271-202ENST00000436554 KIAA1522Q9P206 1035 aaPredicted RBP12.27□□□□□ -0.45
LINC00271-202ENST00000436554 CCDC39Q9UFE4 941 aa12.27□□□□□ -0.45
LINC00271-202ENST00000436554 SUSD2Q9UGT4 822 aa12.27□□□□□ -0.45
LINC00271-202ENST00000436554 PCDH15Q96QU1 1955 aa12.27□□□□□ -0.45
LINC00271-202ENST00000436554 EIF4E1BA6NMX2 242 aaKnown RBP12.26□□□□□ -0.45
LINC00271-202ENST00000436554 RTN3O95197 1032 aaPredicted RBP12.26□□□□□ -0.45
LINC00271-202ENST00000436554 FAM163BP0C2L3 166 aa12.26□□□□□ -0.45
LINC00271-202ENST00000436554 IRF1P10914 325 aa12.26□□□□□ -0.45
LINC00271-202ENST00000436554 PGFP49763 221 aa12.26□□□□□ -0.45
LINC00271-202ENST00000436554 SNX30Q5VWJ9 437 aa12.26□□□□□ -0.45
LINC00271-202ENST00000436554 KIAA1324Q6UXG2 1013 aaKnown RBP12.26□□□□□ -0.45
LINC00271-202ENST00000436554 TPGS1Q6ZTW0 290 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms