RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 NPTX2P47972 431 aa9.1□□□□□ -0.95
NIF3L1-208ENST00000436412 PREPP48147 710 aa9.1□□□□□ -0.95
NIF3L1-208ENST00000436412 CD97P48960 835 aa9.1□□□□□ -0.95
NIF3L1-208ENST00000436412 RING1Q06587 406 aa9.1□□□□□ -0.95
NIF3L1-208ENST00000436412 DMP1Q13316 513 aaPredicted RBP9.1□□□□□ -0.95
NIF3L1-208ENST00000436412 ORC2Q13416 577 aaPredicted RBP9.1□□□□□ -0.95
NIF3L1-208ENST00000436412 VEPH1Q14D04 833 aa9.1□□□□□ -0.95
NIF3L1-208ENST00000436412 SLC10A6Q3KNW5 377 aa9.1□□□□□ -0.95
NIF3L1-208ENST00000436412 USP39Q53GS9 565 aaKnown RBP9.1□□□□□ -0.95
NIF3L1-208ENST00000436412 OVOS1Q6IE37 1185 aa9.1□□□□□ -0.95
NIF3L1-208ENST00000436412 ARMCX5Q6P1M9 558 aa9.1□□□□□ -0.95
NIF3L1-208ENST00000436412 CMTM8Q8IZV2 173 aa9.1□□□□□ -0.95
NIF3L1-208ENST00000436412 ATAD1Q8NBU5 361 aa9.1□□□□□ -0.95
NIF3L1-208ENST00000436412 PGLYRP2Q96PD5 576 aa9.1□□□□□ -0.95
NIF3L1-208ENST00000436412 TSPAN18Q96SJ8 248 aa9.1□□□□□ -0.95
NIF3L1-208ENST00000436412 TARS2Q9BW92 718 aaKnown RBP9.1□□□□□ -0.95
NIF3L1-208ENST00000436412 TMEM60Q9H2L4 133 aa9.1□□□□□ -0.95
NIF3L1-208ENST00000436412 BHMT2Q9H2M3 363 aa9.1□□□□□ -0.95
NIF3L1-208ENST00000436412 C7orf69Q9H7B7 122 aa9.1□□□□□ -0.95
NIF3L1-208ENST00000436412 KIF9Q9HAQ2 790 aa9.1□□□□□ -0.95
NIF3L1-208ENST00000436412 MSRB2Q9Y3D2 182 aa9.1□□□□□ -0.95
NIF3L1-208ENST00000436412 CABIN1Q9Y6J0 2220 aa9.09□□□□□ -0.95
NIF3L1-208ENST00000436412 MYO18AQ92614 2054 aaKnown RBP9.09□□□□□ -0.95
NIF3L1-208ENST00000436412 MTMR11A4FU01 709 aa9.09□□□□□ -0.95
NIF3L1-208ENST00000436412 BTBD18B2RXH4 712 aa9.09□□□□□ -0.95
NIF3L1-208ENST00000436412 H0Y626 953 aa9.09□□□□□ -0.95
NIF3L1-208ENST00000436412 TAF4O00268 1085 aa9.09□□□□□ -0.95
NIF3L1-208ENST00000436412 CDX4O14627 284 aaPredicted RBP9.09□□□□□ -0.95
NIF3L1-208ENST00000436412 XPOTO43592 962 aaKnown RBP9.09□□□□□ -0.95
NIF3L1-208ENST00000436412 TOM1L1O75674 476 aa9.09□□□□□ -0.95
NIF3L1-208ENST00000436412 TRIM16O95361 564 aa9.09□□□□□ -0.95
NIF3L1-208ENST00000436412 MED26O95402 600 aa9.09□□□□□ -0.95
NIF3L1-208ENST00000436412 OR4Q2P0C623 313 aa9.09□□□□□ -0.95
NIF3L1-208ENST00000436412 SPINK2P20155 84 aa9.09□□□□□ -0.95
NIF3L1-208ENST00000436412 GBP1P32455 592 aa9.09□□□□□ -0.95
NIF3L1-208ENST00000436412 RDXP35241 583 aaKnown RBP9.09□□□□□ -0.95
NIF3L1-208ENST00000436412 AVPR1AP37288 418 aa9.09□□□□□ -0.95
NIF3L1-208ENST00000436412 PEX3P56589 373 aa9.09□□□□□ -0.95
NIF3L1-208ENST00000436412 C19orf57Q0VDD7 668 aa9.09□□□□□ -0.95
NIF3L1-208ENST00000436412 SMARCB1Q12824 385 aa9.09□□□□□ -0.95
NIF3L1-208ENST00000436412 LMAN2Q12907 356 aa9.09□□□□□ -0.95
NIF3L1-208ENST00000436412 NOLC1Q14978 699 aaKnown RBP eCLIP9.09□□□□□ -0.95
NIF3L1-208ENST00000436412 PDGFRLQ15198 375 aa9.09□□□□□ -0.95
NIF3L1-208ENST00000436412 TAF12Q16514 161 aa9.09□□□□□ -0.95
NIF3L1-208ENST00000436412 PMS2CLQ68D20 193 aa9.09□□□□□ -0.95
NIF3L1-208ENST00000436412 CC2D1AQ6P1N0 951 aaPredicted RBP9.09□□□□□ -0.95
NIF3L1-208ENST00000436412 DSTYKQ6XUX3 929 aa9.09□□□□□ -0.95
NIF3L1-208ENST00000436412 CENPQQ7L2Z9 268 aaPredicted RBP9.09□□□□□ -0.95
NIF3L1-208ENST00000436412 TRIM42Q8IWZ5 723 aa9.09□□□□□ -0.95
NIF3L1-208ENST00000436412 FAM20CQ8IXL6 584 aa9.09□□□□□ -0.95
NIF3L1-208ENST00000436412 DIS3L2Q8IYB7 885 aaKnown RBP9.09□□□□□ -0.95
NIF3L1-208ENST00000436412 DRC1Q96MC2 740 aa9.09□□□□□ -0.95
NIF3L1-208ENST00000436412 P2RY13Q9BPV8 354 aa9.09□□□□□ -0.95
NIF3L1-208ENST00000436412 NTPCRQ9BSD7 190 aaKnown RBP9.09□□□□□ -0.95
NIF3L1-208ENST00000436412 SLC46A2Q9BY10 475 aa9.09□□□□□ -0.95
NIF3L1-208ENST00000436412 SLC32A1Q9H598 525 aa9.09□□□□□ -0.95
NIF3L1-208ENST00000436412 HPS4Q9NQG7 708 aa9.09□□□□□ -0.95
NIF3L1-208ENST00000436412 KMT5AQ9NQR1 393 aa9.09□□□□□ -0.95
NIF3L1-208ENST00000436412 EVLQ9UI08 416 aaPredicted RBP9.09□□□□□ -0.95
NIF3L1-208ENST00000436412 UBQLN1Q9UMX0 589 aaKnown RBP9.09□□□□□ -0.95
NIF3L1-208ENST00000436412 TIMM13Q9Y5L4 95 aaPredicted RBP9.09□□□□□ -0.95
NIF3L1-208ENST00000436412 DENND4CQ5VZ89 1909 aa9.08□□□□□ -0.96
NIF3L1-208ENST00000436412 UPK3BL1B0FP48 263 aa9.08□□□□□ -0.96
NIF3L1-208ENST00000436412 UPK3BL2E5RIL1 263 aa9.08□□□□□ -0.96
NIF3L1-208ENST00000436412 DCLK1O15075 740 aa9.08□□□□□ -0.96
NIF3L1-208ENST00000436412 CLDN3O15551 220 aa9.08□□□□□ -0.96
NIF3L1-208ENST00000436412 MEFVO15553 781 aaPredicted RBP9.08□□□□□ -0.96
NIF3L1-208ENST00000436412 ICMTO60725 284 aa9.08□□□□□ -0.96
NIF3L1-208ENST00000436412 LARGE1O95461 756 aa9.08□□□□□ -0.96
NIF3L1-208ENST00000436412 CTDNEP1O95476 244 aa9.08□□□□□ -0.96
NIF3L1-208ENST00000436412 EGFP01133 1207 aa9.08□□□□□ -0.96
NIF3L1-208ENST00000436412 CLTAP09496 248 aa9.08□□□□□ -0.96
NIF3L1-208ENST00000436412 OR52Z1P0C646 297 aa9.08□□□□□ -0.96
NIF3L1-208ENST00000436412 ODC1P11926 461 aa9.08□□□□□ -0.96
NIF3L1-208ENST00000436412 FDPSP14324 419 aaKnown RBP9.08□□□□□ -0.96
NIF3L1-208ENST00000436412 MCM7P33993 719 aa9.08□□□□□ -0.96
NIF3L1-208ENST00000436412 CCT6AP40227 531 aaKnown RBP9.08□□□□□ -0.96
NIF3L1-208ENST00000436412 DPP6P42658 865 aa9.08□□□□□ -0.96
NIF3L1-208ENST00000436412 GALK1P51570 392 aa9.08□□□□□ -0.96
NIF3L1-208ENST00000436412 IRX6P78412 446 aaPredicted RBP9.08□□□□□ -0.96
NIF3L1-208ENST00000436412 CYP4F8P98187 520 aa9.08□□□□□ -0.96
NIF3L1-208ENST00000436412 BFSP1Q12934 665 aa9.08□□□□□ -0.96
NIF3L1-208ENST00000436412 STRN3Q13033 797 aa9.08□□□□□ -0.96
NIF3L1-208ENST00000436412 TRIM29Q14134 588 aa9.08□□□□□ -0.96
NIF3L1-208ENST00000436412 DMC1Q14565 340 aa9.08□□□□□ -0.96
NIF3L1-208ENST00000436412 ZNF268Q14587 947 aaPredicted RBP9.08□□□□□ -0.96
NIF3L1-208ENST00000436412 ZBTB6Q15916 424 aa9.08□□□□□ -0.96
NIF3L1-208ENST00000436412 KYAT1Q16773 422 aa9.08□□□□□ -0.96
NIF3L1-208ENST00000436412 ZPBP2Q6X784 338 aa9.08□□□□□ -0.96
NIF3L1-208ENST00000436412 ZDHHC13Q8IUH4 622 aa9.08□□□□□ -0.96
NIF3L1-208ENST00000436412 TSTD1Q8NFU3 115 aa9.08□□□□□ -0.96
NIF3L1-208ENST00000436412 RPLP0P6Q8NHW5 317 aa9.08□□□□□ -0.96
NIF3L1-208ENST00000436412 C2orf15Q8WU43 125 aaKnown RBP9.08□□□□□ -0.96
NIF3L1-208ENST00000436412 CHFRQ96EP1 664 aa9.08□□□□□ -0.96
NIF3L1-208ENST00000436412 YTHDC1Q96MU7 727 aaKnown RBP9.08□□□□□ -0.96
NIF3L1-208ENST00000436412 TIPINQ9BVW5 301 aa9.08□□□□□ -0.96
NIF3L1-208ENST00000436412 EBF3Q9H4W6 596 aa9.08□□□□□ -0.96
NIF3L1-208ENST00000436412 POLD4Q9HCU8 107 aa9.08□□□□□ -0.96
NIF3L1-208ENST00000436412 TDP1Q9NUW8 608 aa9.08□□□□□ -0.96
NIF3L1-208ENST00000436412 TUBGCP4Q9UGJ1 667 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms