RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 CSPG5O95196 566 aa24.11■■□□□ 1.45
CPSF4-204ENST00000436336 PDGFRAP16234 1089 aa24.11■■□□□ 1.45
CPSF4-204ENST00000436336 COMTP21964 271 aa24.11■■□□□ 1.45
CPSF4-204ENST00000436336 PSMA2P25787 234 aa24.11■■□□□ 1.45
CPSF4-204ENST00000436336 ALDH1A3P47895 512 aa24.11■■□□□ 1.45
CPSF4-204ENST00000436336 ZNF143P52747 638 aaPredicted RBP24.11■■□□□ 1.45
CPSF4-204ENST00000436336 IFRD2Q12894 506 aaPredicted RBP24.11■■□□□ 1.45
CPSF4-204ENST00000436336 ACAP1Q15027 740 aa24.11■■□□□ 1.45
CPSF4-204ENST00000436336 TRNP1Q6NT89 227 aa24.11■■□□□ 1.45
CPSF4-204ENST00000436336 ARNTL2Q8WYA1 636 aa24.11■■□□□ 1.45
CPSF4-204ENST00000436336 GOLGA1Q92805 767 aa24.11■■□□□ 1.45
CPSF4-204ENST00000436336 POPDC2Q9HBU9 364 aa24.11■■□□□ 1.45
CPSF4-204ENST00000436336 SCML2Q9UQR0 700 aa24.11■■□□□ 1.45
CPSF4-204ENST00000436336 FAM92AA1XBS5 289 aa24.1■■□□□ 1.45
CPSF4-204ENST00000436336 DPYSL4O14531 572 aa24.1■■□□□ 1.45
CPSF4-204ENST00000436336 C1RP00736 705 aa24.1■■□□□ 1.45
CPSF4-204ENST00000436336 ATP1A1P05023 1023 aaKnown RBP24.1■■□□□ 1.45
CPSF4-204ENST00000436336 GPR152Q8TDT2 470 aa24.1■■□□□ 1.45
CPSF4-204ENST00000436336 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.1■■□□□ 1.45
CPSF4-204ENST00000436336 FBXW11Q9UKB1 542 aa24.1■■□□□ 1.45
CPSF4-204ENST00000436336 HYOU1Q9Y4L1 999 aa24.1■■□□□ 1.45
CPSF4-204ENST00000436336 SLC38A8A6NNN8 435 aa24.1■■□□□ 1.45
CPSF4-204ENST00000436336 SPOPO43791 374 aa24.1■■□□□ 1.45
CPSF4-204ENST00000436336 GLUD1P00367 558 aa24.1■■□□□ 1.45
CPSF4-204ENST00000436336 LTFP02788 710 aa24.1■■□□□ 1.45
CPSF4-204ENST00000436336 YWHAQP27348 245 aa24.1■■□□□ 1.45
CPSF4-204ENST00000436336 SDC4P31431 198 aa24.1■■□□□ 1.45
CPSF4-204ENST00000436336 STKLD1Q8NE28 680 aa24.1■■□□□ 1.45
CPSF4-204ENST00000436336 GIPC2Q8TF65 315 aa24.1■■□□□ 1.45
CPSF4-204ENST00000436336 TIFAQ96CG3 184 aa24.1■■□□□ 1.45
CPSF4-204ENST00000436336 SLC2A13Q96QE2 648 aa24.1■■□□□ 1.45
CPSF4-204ENST00000436336 CNPY3Q9BT09 278 aa24.1■■□□□ 1.45
CPSF4-204ENST00000436336 DDX23Q9BUQ8 820 aaKnown RBP24.1■■□□□ 1.45
CPSF4-204ENST00000436336 TRIM62Q9BVG3 475 aa24.1■■□□□ 1.45
CPSF4-204ENST00000436336 EHD2Q9NZN4 543 aa24.1■■□□□ 1.45
CPSF4-204ENST00000436336 INSL5Q9Y5Q6 135 aa24.1■■□□□ 1.45
CPSF4-204ENST00000436336 DESP17661 470 aa24.09■■□□□ 1.45
CPSF4-204ENST00000436336 NOS2P35228 1153 aa24.09■■□□□ 1.45
CPSF4-204ENST00000436336 MATKP42679 507 aa24.09■■□□□ 1.45
CPSF4-204ENST00000436336 PTPN9P43378 593 aa24.09■■□□□ 1.45
CPSF4-204ENST00000436336 USP46P62068 366 aa24.09■■□□□ 1.45
CPSF4-204ENST00000436336 PLD1Q13393 1074 aa24.09■■□□□ 1.45
CPSF4-204ENST00000436336 HFE2Q6ZVN8 426 aa24.09■■□□□ 1.45
CPSF4-204ENST00000436336 DEFB106AQ8N104 65 aa24.09■■□□□ 1.45
CPSF4-204ENST00000436336 HES6Q96HZ4 224 aa24.09■■□□□ 1.45
CPSF4-204ENST00000436336 TTLL2Q9BWV7 592 aa24.09■■□□□ 1.45
CPSF4-204ENST00000436336 TLR10Q9BXR5 811 aa24.09■■□□□ 1.45
CPSF4-204ENST00000436336 RANBP2P49792 3224 aaKnown RBP24.08■■□□□ 1.45
CPSF4-204ENST00000436336 NCK2O43639 380 aa24.08■■□□□ 1.45
CPSF4-204ENST00000436336 CLCN4P51793 760 aa24.08■■□□□ 1.45
CPSF4-204ENST00000436336 RPS6KA1Q15418 735 aa24.08■■□□□ 1.45
CPSF4-204ENST00000436336 PTPROQ16827 1216 aa24.08■■□□□ 1.45
CPSF4-204ENST00000436336 CCDC14Q49A88 953 aa24.08■■□□□ 1.45
CPSF4-204ENST00000436336 PAPD7Q5XG87 772 aaKnown RBP24.08■■□□□ 1.45
CPSF4-204ENST00000436336 CCDC149Q6ZUS6 474 aa24.08■■□□□ 1.45
CPSF4-204ENST00000436336 BEND5Q7L4P6 421 aa24.08■■□□□ 1.45
CPSF4-204ENST00000436336 CFAP57Q96MR6 1250 aa24.08■■□□□ 1.45
CPSF4-204ENST00000436336 PACSIN2Q9UNF0 486 aaPredicted RBP24.08■■□□□ 1.45
CPSF4-204ENST00000436336 USTQ9Y2C2 406 aa24.08■■□□□ 1.45
CPSF4-204ENST00000436336 MIF4GDA9UHW6 222 aaKnown RBP24.07■■□□□ 1.44
CPSF4-204ENST00000436336 CAPN9O14815 690 aa24.07■■□□□ 1.44
CPSF4-204ENST00000436336 SPATA31D3P0C874 917 aa24.07■■□□□ 1.44
CPSF4-204ENST00000436336 CSH1P0DML2 217 aa24.07■■□□□ 1.44
CPSF4-204ENST00000436336 CSH2P0DML3 217 aa24.07■■□□□ 1.44
CPSF4-204ENST00000436336 YWHAGP61981 247 aaKnown RBP eCLIP24.07■■□□□ 1.44
CPSF4-204ENST00000436336 TWF1Q12792 350 aa24.07■■□□□ 1.44
CPSF4-204ENST00000436336 MTMR3Q13615 1198 aa24.07■■□□□ 1.44
CPSF4-204ENST00000436336 VEPH1Q14D04 833 aa24.07■■□□□ 1.44
CPSF4-204ENST00000436336 BSPRYQ5W0U4 402 aa24.07■■□□□ 1.44
CPSF4-204ENST00000436336 CC2D1AQ6P1N0 951 aaPredicted RBP24.07■■□□□ 1.44
CPSF4-204ENST00000436336 SPATA31D4Q6ZUB0 917 aa24.07■■□□□ 1.44
CPSF4-204ENST00000436336 MON1AQ86VX9 555 aa24.07■■□□□ 1.44
CPSF4-204ENST00000436336 CPNE8Q86YQ8 564 aa24.07■■□□□ 1.44
CPSF4-204ENST00000436336 ARHGAP18Q8N392 663 aa24.07■■□□□ 1.44
CPSF4-204ENST00000436336 KREMEN2Q8NCW0 462 aa24.07■■□□□ 1.44
CPSF4-204ENST00000436336 CD101Q93033 1021 aa24.07■■□□□ 1.44
CPSF4-204ENST00000436336 STAP1Q9ULZ2 295 aa24.07■■□□□ 1.44
CPSF4-204ENST00000436336 CHD9Q3L8U1 2897 aa24.07■■□□□ 1.44
CPSF4-204ENST00000436336 RNF8O76064 485 aa24.07■■□□□ 1.44
CPSF4-204ENST00000436336 FYNP06241 537 aa24.07■■□□□ 1.44
CPSF4-204ENST00000436336 EPHB3P54753 998 aa24.07■■□□□ 1.44
CPSF4-204ENST00000436336 MLLT1Q03111 559 aaPredicted RBP24.07■■□□□ 1.44
CPSF4-204ENST00000436336 DCAF6Q58WW2 860 aa24.07■■□□□ 1.44
CPSF4-204ENST00000436336 FBXO32Q969P5 355 aa24.07■■□□□ 1.44
CPSF4-204ENST00000436336 ABCC13Q9NSE7 274 aa24.07■■□□□ 1.44
CPSF4-204ENST00000436336 C15orf59Q2T9L4 293 aaPredicted RBP24.06■■□□□ 1.44
CPSF4-204ENST00000436336 RTL10Q7L3V2 364 aa24.06■■□□□ 1.44
CPSF4-204ENST00000436336 SLC7A14Q8TBB6 771 aa24.06■■□□□ 1.44
CPSF4-204ENST00000436336 GDPD5Q8WTR4 605 aa24.06■■□□□ 1.44
CPSF4-204ENST00000436336 NCAPGQ9BPX3 1015 aa24.06■■□□□ 1.44
CPSF4-204ENST00000436336 RRN3Q9NYV6 651 aa24.06■■□□□ 1.44
CPSF4-204ENST00000436336 NAALADL1Q9UQQ1 740 aa24.06■■□□□ 1.44
CPSF4-204ENST00000436336 OBSL1O75147 1896 aa24.05■■□□□ 1.44
CPSF4-204ENST00000436336 CCDC66A2RUB6 948 aa24.05■■□□□ 1.44
CPSF4-204ENST00000436336 CLASP2O75122 1294 aaKnown RBP24.05■■□□□ 1.44
CPSF4-204ENST00000436336 LRCH4O75427 683 aa24.05■■□□□ 1.44
CPSF4-204ENST00000436336 NCAM1P13591 858 aa24.05■■□□□ 1.44
CPSF4-204ENST00000436336 PRLRP16471 622 aa24.05■■□□□ 1.44
CPSF4-204ENST00000436336 CTNNA2P26232 953 aa24.05■■□□□ 1.44
CPSF4-204ENST00000436336 CTNNA1P35221 906 aaKnown RBP24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms