RNA–Protein interactions for RNA: ENST00000435218.6

TMEM40-204, Transcript of transmembrane protein 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM40, Length 1,547 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-204ENST00000435218 IRAK3Q9Y616 596 aa15.8■□□□□ 0.12
TMEM40-204ENST00000435218 CHD9Q3L8U1 2897 aa15.8■□□□□ 0.12
TMEM40-204ENST00000435218 YJEFN3A6XGL0 299 aa15.79■□□□□ 0.12
TMEM40-204ENST00000435218 E7ENQ6 273 aa15.79■□□□□ 0.12
TMEM40-204ENST00000435218 ENDOD1O94919 500 aa15.79■□□□□ 0.12
TMEM40-204ENST00000435218 RB1P06400 928 aa15.79■□□□□ 0.12
TMEM40-204ENST00000435218 KRT7P08729 469 aa15.79■□□□□ 0.12
TMEM40-204ENST00000435218 USP17L7P0C7H9 530 aa15.79■□□□□ 0.12
TMEM40-204ENST00000435218 TUFMP49411 452 aaKnown RBP15.79■□□□□ 0.12
TMEM40-204ENST00000435218 DNA2P51530 1060 aa15.79■□□□□ 0.12
TMEM40-204ENST00000435218 CDR1P51861 262 aa15.79■□□□□ 0.12
TMEM40-204ENST00000435218 ARPP19P56211 112 aa15.79■□□□□ 0.12
TMEM40-204ENST00000435218 UBE3AQ05086 875 aa15.79■□□□□ 0.12
TMEM40-204ENST00000435218 HADHQ16836 314 aaKnown RBP15.79■□□□□ 0.12
TMEM40-204ENST00000435218 SLC25A52Q3SY17 297 aa15.79■□□□□ 0.12
TMEM40-204ENST00000435218 TTC9BQ8N6N2 239 aa15.79■□□□□ 0.12
TMEM40-204ENST00000435218 EXD1Q8NHP7 514 aa15.79■□□□□ 0.12
TMEM40-204ENST00000435218 FAM149B1Q96BN6 582 aa15.79■□□□□ 0.12
TMEM40-204ENST00000435218 CAPZA3Q96KX2 299 aa15.79■□□□□ 0.12
TMEM40-204ENST00000435218 RNPC3Q96LT9 517 aaKnown RBP15.79■□□□□ 0.12
TMEM40-204ENST00000435218 CFAP57Q96MR6 1250 aa15.79■□□□□ 0.12
TMEM40-204ENST00000435218 NPY6RQ99463 290 aa15.79■□□□□ 0.12
TMEM40-204ENST00000435218 CRISPLD1Q9H336 500 aa15.79■□□□□ 0.12
TMEM40-204ENST00000435218 DDX56Q9NY93 547 aaKnown RBP15.79■□□□□ 0.12
TMEM40-204ENST00000435218 STAP1Q9ULZ2 295 aa15.79■□□□□ 0.12
TMEM40-204ENST00000435218 USTQ9Y2C2 406 aa15.79■□□□□ 0.12
TMEM40-204ENST00000435218 PGRMC1O00264 195 aaKnown RBP15.78■□□□□ 0.12
TMEM40-204ENST00000435218 PDE2AO00408 941 aaPredicted RBP15.78■□□□□ 0.12
TMEM40-204ENST00000435218 C2CD2LO14523 706 aa15.78■□□□□ 0.12
TMEM40-204ENST00000435218 RTN3O95197 1032 aaPredicted RBP15.78■□□□□ 0.12
TMEM40-204ENST00000435218 FYNP06241 537 aa15.78■□□□□ 0.12
TMEM40-204ENST00000435218 RPL17P18621 184 aaKnown RBP15.78■□□□□ 0.12
TMEM40-204ENST00000435218 CTNNB1P35222 781 aa15.78■□□□□ 0.12
TMEM40-204ENST00000435218 GTF2F1P35269 517 aaKnown RBP eCLIP15.78■□□□□ 0.12
TMEM40-204ENST00000435218 RABGGTBP53611 331 aa15.78■□□□□ 0.12
TMEM40-204ENST00000435218 TUBB4BP68371 445 aa15.78■□□□□ 0.12
TMEM40-204ENST00000435218 C15orf59Q2T9L4 293 aaPredicted RBP15.78■□□□□ 0.12
TMEM40-204ENST00000435218 MGAT5BQ3V5L5 792 aa15.78■□□□□ 0.12
TMEM40-204ENST00000435218 SEL1L2Q5TEA6 688 aa15.78■□□□□ 0.12
TMEM40-204ENST00000435218 CCDC181Q5TID7 509 aa15.78■□□□□ 0.12
TMEM40-204ENST00000435218 DAB2IPQ5VWQ8 1189 aa15.78■□□□□ 0.12
TMEM40-204ENST00000435218 DENND5BQ6ZUT9 1274 aa15.78■□□□□ 0.12
TMEM40-204ENST00000435218 DEFB106AQ8N104 65 aa15.78■□□□□ 0.12
TMEM40-204ENST00000435218 NDRG1Q92597 394 aaKnown RBP15.78■□□□□ 0.12
TMEM40-204ENST00000435218 SAMD11Q96NU1 681 aa15.78■□□□□ 0.12
TMEM40-204ENST00000435218 SCML2Q9UQR0 700 aa15.78■□□□□ 0.12
TMEM40-204ENST00000435218 CTAGE15A4D2H0 777 aa15.78■□□□□ 0.12
TMEM40-204ENST00000435218 CEP104O60308 925 aa15.78■□□□□ 0.12
TMEM40-204ENST00000435218 CTAGE8P0CG41 777 aa15.78■□□□□ 0.12
TMEM40-204ENST00000435218 TCF4P15884 667 aa15.78■□□□□ 0.12
TMEM40-204ENST00000435218 MIPP30301 263 aa15.78■□□□□ 0.12
TMEM40-204ENST00000435218 DUSP4Q13115 394 aa15.78■□□□□ 0.12
TMEM40-204ENST00000435218 SHHQ15465 462 aa15.78■□□□□ 0.12
TMEM40-204ENST00000435218 DDR2Q16832 855 aa15.78■□□□□ 0.12
TMEM40-204ENST00000435218 HFE2Q6ZVN8 426 aa15.78■□□□□ 0.12
TMEM40-204ENST00000435218 CTAGE6Q86UF2 777 aa15.78■□□□□ 0.12
TMEM40-204ENST00000435218 CTAGE4Q8IX94 777 aa15.78■□□□□ 0.12
TMEM40-204ENST00000435218 SCAMP5Q8TAC9 235 aa15.78■□□□□ 0.12
TMEM40-204ENST00000435218 FAM172AQ8WUF8 416 aa15.78■□□□□ 0.12
TMEM40-204ENST00000435218 GOLGA1Q92805 767 aa15.78■□□□□ 0.12
TMEM40-204ENST00000435218 PGAP3Q96FM1 320 aaPredicted RBP15.78■□□□□ 0.12
TMEM40-204ENST00000435218 MS4A14Q96JA4 679 aa15.78■□□□□ 0.12
TMEM40-204ENST00000435218 TBCBQ99426 244 aa15.78■□□□□ 0.12
TMEM40-204ENST00000435218 NAP1L3Q99457 506 aaPredicted RBP15.78■□□□□ 0.12
TMEM40-204ENST00000435218 USP18Q9UMW8 372 aa15.78■□□□□ 0.12
TMEM40-204ENST00000435218 PCDHA11Q9Y5I1 949 aa15.78■□□□□ 0.12
TMEM40-204ENST00000435218 TRANK1O15050 2925 aa15.77■□□□□ 0.11
TMEM40-204ENST00000435218 EFCAB8A8MWE9 144 aa15.77■□□□□ 0.11
TMEM40-204ENST00000435218 TEX28O15482 410 aa15.77■□□□□ 0.11
TMEM40-204ENST00000435218 ZRANB2O95218 330 aaKnown RBP eCLIP15.77■□□□□ 0.11
TMEM40-204ENST00000435218 TRUB2O95900 331 aaKnown RBP15.77■□□□□ 0.11
TMEM40-204ENST00000435218 PYGMP11217 842 aa15.77■□□□□ 0.11
TMEM40-204ENST00000435218 HDAC4P56524 1084 aa15.77■□□□□ 0.11
TMEM40-204ENST00000435218 COPS2P61201 443 aa15.77■□□□□ 0.11
TMEM40-204ENST00000435218 DCAF6Q58WW2 860 aa15.77■□□□□ 0.11
TMEM40-204ENST00000435218 SH3PXD2AQ5TCZ1 1133 aa15.77■□□□□ 0.11
TMEM40-204ENST00000435218 CYP4V2Q6ZWL3 525 aaPredicted RBP15.77■□□□□ 0.11
TMEM40-204ENST00000435218 MON1AQ86VX9 555 aa15.77■□□□□ 0.11
TMEM40-204ENST00000435218 TCEAL8Q8IYN2 117 aa15.77■□□□□ 0.11
TMEM40-204ENST00000435218 RCOR2Q8IZ40 523 aa15.77■□□□□ 0.11
TMEM40-204ENST00000435218 TEKT4Q8WW24 435 aa15.77■□□□□ 0.11
TMEM40-204ENST00000435218 SEPT5Q99719 369 aaPredicted RBP15.77■□□□□ 0.11
TMEM40-204ENST00000435218 GDF15Q99988 308 aa15.77■□□□□ 0.11
TMEM40-204ENST00000435218 TTLL2Q9BWV7 592 aa15.77■□□□□ 0.11
TMEM40-204ENST00000435218 ABCC13Q9NSE7 274 aa15.77■□□□□ 0.11
TMEM40-204ENST00000435218 TMEM51Q9NW97 253 aa15.77■□□□□ 0.11
TMEM40-204ENST00000435218 EHD2Q9NZN4 543 aa15.77■□□□□ 0.11
TMEM40-204ENST00000435218 SLC27A5Q9Y2P5 690 aa15.77■□□□□ 0.11
TMEM40-204ENST00000435218 CHD7Q9P2D1 2997 aa15.76■□□□□ 0.11
TMEM40-204ENST00000435218 CTIFO43310 598 aaKnown RBP15.76■□□□□ 0.11
TMEM40-204ENST00000435218 TADA3O75528 432 aa15.76■□□□□ 0.11
TMEM40-204ENST00000435218 C1RP00736 705 aa15.76■□□□□ 0.11
TMEM40-204ENST00000435218 ATF6P18850 670 aa15.76■□□□□ 0.11
TMEM40-204ENST00000435218 IL1R2P27930 398 aa15.76■□□□□ 0.11
TMEM40-204ENST00000435218 PTPN7P35236 360 aa15.76■□□□□ 0.11
TMEM40-204ENST00000435218 SSR1P43307 286 aaKnown RBP15.76■□□□□ 0.11
TMEM40-204ENST00000435218 GPR15P49685 360 aa15.76■□□□□ 0.11
TMEM40-204ENST00000435218 PSEN1P49768 467 aa15.76■□□□□ 0.11
TMEM40-204ENST00000435218 ATP11AP98196 1134 aa15.76■□□□□ 0.11
TMEM40-204ENST00000435218 BOLA3Q53S33 107 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms