RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 KCNN4O15554 427 aa10.85□□□□□ -0.67
CD44-210ENST00000434472 WFS1O76024 890 aa10.85□□□□□ -0.67
CD44-210ENST00000434472 ZBED1O96006 694 aa10.85□□□□□ -0.67
CD44-210ENST00000434472 ADORA2AP29274 412 aa10.85□□□□□ -0.67
CD44-210ENST00000434472 PSMC4P43686 418 aa10.85□□□□□ -0.67
CD44-210ENST00000434472 YWHAGP61981 247 aaKnown RBP eCLIP10.85□□□□□ -0.67
CD44-210ENST00000434472 GAD2Q05329 585 aa10.85□□□□□ -0.67
CD44-210ENST00000434472 MGAT5Q09328 741 aa10.85□□□□□ -0.67
CD44-210ENST00000434472 PTK7Q13308 1070 aa10.85□□□□□ -0.67
CD44-210ENST00000434472 C15orf59Q2T9L4 293 aaPredicted RBP10.85□□□□□ -0.67
CD44-210ENST00000434472 TRNP1Q6NT89 227 aa10.85□□□□□ -0.67
CD44-210ENST00000434472 SLC27A1Q6PCB7 646 aa10.85□□□□□ -0.67
CD44-210ENST00000434472 C1orf228Q6PIY5 440 aa10.85□□□□□ -0.67
CD44-210ENST00000434472 NPNTQ6UXI9 565 aa10.85□□□□□ -0.67
CD44-210ENST00000434472 MOB2Q70IA6 237 aa10.85□□□□□ -0.67
CD44-210ENST00000434472 ZC3H18Q86VM9 953 aaKnown RBP10.85□□□□□ -0.67
CD44-210ENST00000434472 FAM228AQ86W67 206 aa10.85□□□□□ -0.67
CD44-210ENST00000434472 CHSY1Q86X52 802 aa10.85□□□□□ -0.67
CD44-210ENST00000434472 TRIM42Q8IWZ5 723 aa10.85□□□□□ -0.67
CD44-210ENST00000434472 PLD5Q8N7P1 536 aa10.85□□□□□ -0.67
CD44-210ENST00000434472 MCUQ8NE86 351 aa10.85□□□□□ -0.67
CD44-210ENST00000434472 FAM172AQ8WUF8 416 aa10.85□□□□□ -0.67
CD44-210ENST00000434472 C10orf82Q8WW14 230 aa10.85□□□□□ -0.67
CD44-210ENST00000434472 INPP5DQ92835 1189 aa10.85□□□□□ -0.67
CD44-210ENST00000434472 LRRC37BQ96QE4 947 aa10.85□□□□□ -0.67
CD44-210ENST00000434472 WDR83Q9BRX9 315 aaKnown RBP10.85□□□□□ -0.67
CD44-210ENST00000434472 TUT1Q9H6E5 874 aaKnown RBP10.85□□□□□ -0.67
CD44-210ENST00000434472 USP29Q9HBJ7 922 aa10.85□□□□□ -0.67
CD44-210ENST00000434472 RNF181Q9P0P0 153 aa10.85□□□□□ -0.67
CD44-210ENST00000434472 CHMP2BQ9UQN3 213 aa10.85□□□□□ -0.67
CD44-210ENST00000434472 VGLL3A8MV65 326 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 XPOTO43592 962 aaKnown RBP10.84□□□□□ -0.67
CD44-210ENST00000434472 LPXNO60711 386 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 CSDE1O75534 798 aaKnown RBP10.84□□□□□ -0.67
CD44-210ENST00000434472 ZNF189O75820 626 aaPredicted RBP10.84□□□□□ -0.67
CD44-210ENST00000434472 NPTXRO95502 500 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 ITGBL1O95965 494 aaPredicted RBP10.84□□□□□ -0.67
CD44-210ENST00000434472 IL1BP01584 269 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 HOXD8P13378 290 aaPredicted RBP10.84□□□□□ -0.67
CD44-210ENST00000434472 CCND1P24385 295 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 ACADSBP45954 432 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 GCLCP48506 637 aaPredicted RBP10.84□□□□□ -0.67
CD44-210ENST00000434472 NR2C2P49116 596 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 RGS7P49802 495 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 KCNJ2P63252 427 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 ATP11AP98196 1134 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 SLC18A2Q05940 514 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 EFTUD2Q15029 972 aaKnown RBP eCLIP10.84□□□□□ -0.67
CD44-210ENST00000434472 CDO1Q16878 200 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 SLC45A4Q5BKX6 768 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 LDLRAD1Q5T700 205 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 PPP1R26Q5T8A7 1209 aaPredicted RBP10.84□□□□□ -0.67
CD44-210ENST00000434472 TTC39BQ5VTQ0 682 aaPredicted RBP10.84□□□□□ -0.67
CD44-210ENST00000434472 SLC26A11Q86WA9 606 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 TCP10LQ8TDR4 215 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 SLC35F5Q8WV83 523 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 APOPT1Q96IL0 206 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 SNX27Q96L92 541 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 TMEM237Q96Q45 408 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 PPP1R16BQ96T49 567 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 SNRNP25Q9BV90 132 aaKnown RBP10.84□□□□□ -0.67
CD44-210ENST00000434472 MYLK2Q9H1R3 596 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 YY1AP1Q9H869 796 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 NGRNQ9NPE2 291 aaKnown RBP10.84□□□□□ -0.67
CD44-210ENST00000434472 SAR1AQ9NR31 198 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 RAB6BQ9NRW1 208 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 ZNF180Q9UJW8 692 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 GRID1Q9ULK0 1009 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 PLXNA1Q9UIW2 1896 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 A6NJR5 290 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 KBTBD13C9JR72 458 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 C2CD2LO14523 706 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 KRT37O76014 449 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 TGDSO95455 350 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 CD4P01730 458 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 ZNF286BP0CG31 522 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 TPSB2P20231 275 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 AXLP30530 894 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 ADCYAP1R1P41586 468 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 BST2Q10589 180 aaKnown RBP10.84□□□□□ -0.67
CD44-210ENST00000434472 TPSAB1Q15661 275 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 ZBTB6Q15916 424 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 DGKDQ16760 1214 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 SH3PXD2AQ5TCZ1 1133 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 PMF1Q6P1K2 205 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 BZW1Q7L1Q6 419 aaKnown RBP10.84□□□□□ -0.67
CD44-210ENST00000434472 OTOAQ7RTW8 1153 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 TTC30AQ86WT1 665 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 CEP57Q86XR8 500 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 TAB3Q8N5C8 712 aaPredicted RBP10.84□□□□□ -0.67
CD44-210ENST00000434472 PQLC3Q8N755 202 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 ERP27Q96DN0 273 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 SLC10A4Q96EP9 437 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 MRPL45Q9BRJ2 306 aaKnown RBP10.84□□□□□ -0.67
CD44-210ENST00000434472 KATNBL1Q9H079 304 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 LRMDAQ9H2I8 198 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 MANSC1Q9H8J5 431 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 ETNK1Q9HBU6 452 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 ETNK2Q9NVF9 386 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 MORF4L1Q9UBU8 362 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms