RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 SPOCK2Q92563 424 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 RUSC1Q9BVN2 902 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 DDX47Q9H0S4 455 aaKnown RBP3.9□□□□□ -1.78
SHPRH-205ENST00000433355 FAM53CQ9NYF3 392 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 FRMPD2Q68DX3 1309 aaPredicted RBP3.9□□□□□ -1.78
SHPRH-205ENST00000433355 CACNA1CQ13936 2221 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 ZNF701M0R085 212 aaPredicted RBP3.9□□□□□ -1.78
SHPRH-205ENST00000433355 CYTH3O43739 400 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 ZNF862O60290 1169 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 HAUS5O94927 633 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 ARHGEF15O94989 841 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 NPPAP01160 153 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 IFNA8P32881 189 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 NUP107P57740 925 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 YWHAGP61981 247 aaKnown RBP eCLIP3.9□□□□□ -1.78
SHPRH-205ENST00000433355 ZNF844Q08AG5 666 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 FAM83EQ2M2I3 478 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 WDR72Q3MJ13 1102 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 VPS37AQ8NEZ2 397 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 PPP1R16AQ96I34 528 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 DUSP9Q99956 384 aaKnown RBP3.9□□□□□ -1.78
SHPRH-205ENST00000433355 NUSAP1Q9BXS6 441 aaKnown RBP3.9□□□□□ -1.78
SHPRH-205ENST00000433355 GOLPH3Q9H4A6 298 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 LRRC4Q9HBW1 653 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 HACL1Q9UJ83 578 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 NOD1Q9Y239 953 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 BRCA1P38398 1863 aaKnown RBP3.9□□□□□ -1.78
SHPRH-205ENST00000433355 F8W031 263 aaPredicted RBP3.9□□□□□ -1.78
SHPRH-205ENST00000433355 CAPN9O14815 690 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 C21orf2O43822 256 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 FTLP02792 175 aaPredicted RBP3.9□□□□□ -1.78
SHPRH-205ENST00000433355 DLATP10515 647 aaKnown RBP3.9□□□□□ -1.78
SHPRH-205ENST00000433355 TFAMQ00059 246 aaKnown RBP3.9□□□□□ -1.78
SHPRH-205ENST00000433355 PRKG1Q13976 671 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 APTXQ7Z2E3 356 aaKnown RBP3.9□□□□□ -1.78
SHPRH-205ENST00000433355 ZFPM1Q8IX07 1006 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 URGCPQ8TCY9 931 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 NR4A3Q92570 626 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 DYNLL2Q96FJ2 89 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 HHIPL1Q96JK4 782 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 ZNF512Q96ME7 567 aaPredicted RBP3.9□□□□□ -1.78
SHPRH-205ENST00000433355 RBBP8Q99708 897 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 TBC1D13Q9NVG8 400 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 GDAP2Q9NXN4 497 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 KLHL42Q9P2K6 505 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 POLLQ9UGP5 575 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 SLITRK3O94933 977 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 IFNB1P01574 187 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 SERPINE1P05121 402 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 PPIBP23284 216 aaKnown RBP3.9□□□□□ -1.78
SHPRH-205ENST00000433355 FOXM1Q08050 763 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 MGAT5Q09328 741 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 EIF2B5Q13144 721 aaKnown RBP3.9□□□□□ -1.78
SHPRH-205ENST00000433355 PSMD5Q16401 504 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 RNF43Q68DV7 783 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 RMDN1Q96DB5 314 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 EMILIN2Q9BXX0 1053 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 ZCCHC2Q9C0B9 1178 aaKnown RBP3.9□□□□□ -1.78
SHPRH-205ENST00000433355 NRDE2Q9H7Z3 1164 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 CD320Q9NPF0 282 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 THUMPD1Q9NXG2 353 aaKnown RBP3.9□□□□□ -1.78
SHPRH-205ENST00000433355 ARIH1Q9Y4X5 557 aaPredicted RBP3.9□□□□□ -1.78
SHPRH-205ENST00000433355 A0A0A0MRY4 1105 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 COILP38432 576 aaPredicted RBP3.9□□□□□ -1.79
SHPRH-205ENST00000433355 NPY2RP49146 381 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 DYNLL1P63167 89 aaKnown RBP3.9□□□□□ -1.79
SHPRH-205ENST00000433355 AP1B1Q10567 949 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 CAPRIN1Q14444 709 aaKnown RBP3.9□□□□□ -1.79
SHPRH-205ENST00000433355 AAGABQ6PD74 315 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 TBC1D19Q8N5T2 526 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 FEZF2Q8TBJ5 459 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 OTUB1Q96FW1 271 aaPredicted RBP3.9□□□□□ -1.79
SHPRH-205ENST00000433355 SPATA13Q96N96 652 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 LACRTQ9GZZ8 138 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 PXMP2Q9NR77 195 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 ARHGAP20Q9P2F6 1191 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 MYO7AQ13402 2215 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 HIVEP2P31629 2446 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 SMCHD1A6NHR9 2005 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 SYN3O14994 580 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 KRT14P02533 472 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 NFKB1P19838 968 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 PTPN4P29074 926 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 HSD17B3P37058 310 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 ACADVLP49748 655 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 ARID5AQ03989 594 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 BNIP2Q12982 314 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 TMED1Q13445 227 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 INPP5AQ14642 412 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 MIA3Q5JRA6 1907 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 DUPD1Q68J44 220 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 ASCC3Q8N3C0 2202 aaKnown RBP3.9□□□□□ -1.79
SHPRH-205ENST00000433355 STKLD1Q8NE28 680 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 SPATA33Q96N06 139 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 GMLQ99445 158 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 ZBTB18Q99592 522 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 STRA6Q9BX79 667 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 TMBIM4Q9HC24 238 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 NOCTQ9UK39 431 aaKnown RBP3.9□□□□□ -1.79
SHPRH-205ENST00000433355 ALOX15BO15296 676 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms