RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 A8MU76 341 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 KLRF2D3W0D1 207 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 CFAP99D6REC4 459 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 MSI1O43347 362 aaKnown RBP11.31□□□□□ -0.6
CCDC171-202ENST00000432954 USP2O75604 605 aaPredicted RBP11.31□□□□□ -0.6
CCDC171-202ENST00000432954 TNFAIP8O95379 198 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 CALB1P05937 261 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 MYL3P08590 195 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 LTA4HP09960 611 aaKnown RBP11.31□□□□□ -0.6
CCDC171-202ENST00000432954 TYK2P29597 1187 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 ARFIP1P53367 373 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 NPEPPSP55786 919 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 AP1S2P56377 157 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 C21orf62-AS1Q17RA5 79 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 ALKBH5Q6P6C2 394 aaKnown RBP11.31□□□□□ -0.6
CCDC171-202ENST00000432954 IYDQ6PHW0 289 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 POTEBQ6S5H4 581 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 CYP20A1Q6UW02 462 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 UNC5AQ6ZN44 842 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 GALNT4Q8N4A0 578 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 U2AF1L4Q8WU68 220 aaKnown RBP11.31□□□□□ -0.6
CCDC171-202ENST00000432954 ALKBH8Q96BT7 664 aaKnown RBP11.31□□□□□ -0.6
CCDC171-202ENST00000432954 AP1M1Q9BXS5 423 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 RMND5AQ9H871 391 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 TRPS1Q9UHF7 1281 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 CBY1Q9Y3M2 126 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 EMSYQ7Z589 1322 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 PTPRUQ92729 1446 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 H3BNX3 289 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 RNF103O00237 685 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 LAD1O00515 517 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 SLITRK3O94933 977 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 SNAP29O95721 258 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 FDX1P10109 184 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 ALOX12P18054 663 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 CCNE1P24864 410 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 GP5P40197 560 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 SSRP1Q08945 709 aaKnown RBP11.31□□□□□ -0.6
CCDC171-202ENST00000432954 NR5A1Q13285 461 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 ERV3-1Q14264 604 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 AARDQ4LEZ3 155 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 HGSNATQ68CP4 663 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 TMEM132EQ6IEE7 984 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 CHADLQ6NUI6 762 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 KDELC1Q6UW63 502 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 GSTA5Q7RTV2 222 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 BNIPLQ7Z465 357 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 TRMT44Q8IYL2 757 aaKnown RBP11.31□□□□□ -0.6
CCDC171-202ENST00000432954 NECAB1Q8N987 351 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 KCT2Q8NC54 265 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 DTX3LQ8TDB6 740 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 GRK7Q8WTQ7 553 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 HES6Q96HZ4 224 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 DEPDC7Q96QD5 511 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 KCNK13Q9HB14 408 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 PCDHA7Q9UN72 937 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 DERAQ9Y315 318 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 WASF2Q9Y6W5 498 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 TMEM131LA2VDJ0 1609 aa11.31□□□□□ -0.6
CCDC171-202ENST00000432954 IFT172Q9UG01 1749 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 DBX1A6NMT0 343 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 DENRO43583 198 aaKnown RBP11.3□□□□□ -0.6
CCDC171-202ENST00000432954 OR7A10O76100 309 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 CAPNS1P04632 268 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 GYPCP04921 128 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 THRAP10827 490 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 PRDX6P30041 224 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 ECHS1P30084 290 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 SOX6P35712 828 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 GARSP41250 739 aaKnown RBP11.3□□□□□ -0.6
CCDC171-202ENST00000432954 SF3A3Q12874 501 aaKnown RBP eCLIP11.3□□□□□ -0.6
CCDC171-202ENST00000432954 EARS2Q5JPH6 523 aaKnown RBP11.3□□□□□ -0.6
CCDC171-202ENST00000432954 SCARA3Q6AZY7 606 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.3□□□□□ -0.6
CCDC171-202ENST00000432954 BBS7Q8IWZ6 715 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 TBC1D15Q8TC07 691 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 SSH3Q8TE77 659 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 RAD51AP1Q96B01 352 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 MTBPQ96DY7 904 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 LRGUKQ96M69 825 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 ZNF578Q96N58 590 aaPredicted RBP11.3□□□□□ -0.6
CCDC171-202ENST00000432954 GPAMQ9HCL2 828 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 PTPRHQ9HD43 1115 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 RBM12Q9NTZ6 932 aaKnown RBP11.3□□□□□ -0.6
CCDC171-202ENST00000432954 BAG5Q9UL15 447 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 DAGLAQ9Y4D2 1042 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 CPQQ9Y646 472 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 CSNK1G3Q9Y6M4 447 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 ERVH48-1M5A8F1 160 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 GTPBP6O43824 516 aaPredicted RBP11.3□□□□□ -0.6
CCDC171-202ENST00000432954 TOM1O60784 492 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 VNN1O95497 513 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 AGTP01019 485 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 KRT3P12035 628 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 NPR3P17342 541 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 IL6STP40189 918 aaPredicted RBP11.3□□□□□ -0.6
CCDC171-202ENST00000432954 IARSP41252 1262 aaKnown RBP11.3□□□□□ -0.6
CCDC171-202ENST00000432954 HERVK_113P62684 666 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 DUSP4Q13115 394 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 SMAD4Q13485 552 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms