RNA–Protein interactions for RNA: ENST00000430335.1

CSNK1E-207, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-207ENST00000430335 DPYSL4O14531 572 aa21.1■□□□□ 0.97
CSNK1E-207ENST00000430335 TLR5O60602 858 aa21.1■□□□□ 0.97
CSNK1E-207ENST00000430335 ALADP13716 330 aa21.1■□□□□ 0.97
CSNK1E-207ENST00000430335 TCF3P15923 654 aa21.1■□□□□ 0.97
CSNK1E-207ENST00000430335 FERP16591 822 aa21.1■□□□□ 0.97
CSNK1E-207ENST00000430335 CDH5P33151 784 aaPredicted RBP21.1■□□□□ 0.97
CSNK1E-207ENST00000430335 PDCLQ13371 301 aa21.1■□□□□ 0.97
CSNK1E-207ENST00000430335 VITQ6UXI7 678 aa21.1■□□□□ 0.97
CSNK1E-207ENST00000430335 BHLHA9Q7RTU4 235 aa21.1■□□□□ 0.97
CSNK1E-207ENST00000430335 PASD1Q8IV76 773 aa21.1■□□□□ 0.97
CSNK1E-207ENST00000430335 IRGQQ8WZA9 623 aa21.1■□□□□ 0.97
CSNK1E-207ENST00000430335 KHSRPQ92945 711 aaKnown RBP eCLIP21.1■□□□□ 0.97
CSNK1E-207ENST00000430335 RSPRY1Q96DX4 576 aa21.1■□□□□ 0.97
CSNK1E-207ENST00000430335 NOX5Q96PH1 765 aa21.1■□□□□ 0.97
CSNK1E-207ENST00000430335 RNF38Q9H0F5 515 aa21.1■□□□□ 0.97
CSNK1E-207ENST00000430335 PDCL3Q9H2J4 239 aa21.1■□□□□ 0.97
CSNK1E-207ENST00000430335 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.1■□□□□ 0.97
CSNK1E-207ENST00000430335 OSER1Q9NX31 292 aa21.1■□□□□ 0.97
CSNK1E-207ENST00000430335 ANAPC1Q9H1A4 1944 aa21.1■□□□□ 0.97
CSNK1E-207ENST00000430335 MYO10Q9HD67 2058 aa21.09■□□□□ 0.97
CSNK1E-207ENST00000430335 PI4K2BG5E9Z4 385 aa21.09■□□□□ 0.97
CSNK1E-207ENST00000430335 COCHO43405 550 aa21.09■□□□□ 0.97
CSNK1E-207ENST00000430335 LSM8O95777 96 aaKnown RBP21.09■□□□□ 0.97
CSNK1E-207ENST00000430335 SRFP11831 508 aa21.09■□□□□ 0.97
CSNK1E-207ENST00000430335 LCP1P13796 627 aa21.09■□□□□ 0.97
CSNK1E-207ENST00000430335 PSMC3P17980 439 aa21.09■□□□□ 0.97
CSNK1E-207ENST00000430335 DAOAP59103 153 aa21.09■□□□□ 0.97
CSNK1E-207ENST00000430335 ZXDAP98168 799 aa21.09■□□□□ 0.97
CSNK1E-207ENST00000430335 CDR2Q01850 454 aa21.09■□□□□ 0.97
CSNK1E-207ENST00000430335 FCHO2Q0JRZ9 810 aa21.09■□□□□ 0.97
CSNK1E-207ENST00000430335 TAF3Q5VWG9 929 aa21.09■□□□□ 0.97
CSNK1E-207ENST00000430335 KLHDC10Q6PID8 442 aa21.09■□□□□ 0.97
CSNK1E-207ENST00000430335 TMEM35BQ8NCS4 154 aa21.09■□□□□ 0.97
CSNK1E-207ENST00000430335 CDK5RAP1Q96SZ6 601 aaKnown RBP21.09■□□□□ 0.97
CSNK1E-207ENST00000430335 SMG9Q9H0W8 520 aaKnown RBP21.09■□□□□ 0.97
CSNK1E-207ENST00000430335 CCSER2Q9H7U1 834 aa21.09■□□□□ 0.97
CSNK1E-207ENST00000430335 SLC2A4RGQ9NR83 387 aa21.09■□□□□ 0.97
CSNK1E-207ENST00000430335 ST7Q9NRC1 585 aa21.09■□□□□ 0.97
CSNK1E-207ENST00000430335 NAGPAQ9UK23 515 aa21.09■□□□□ 0.97
CSNK1E-207ENST00000430335 CCL26Q9Y258 94 aa21.09■□□□□ 0.97
CSNK1E-207ENST00000430335 LRRC53A6NM62 1247 aa21.08■□□□□ 0.97
CSNK1E-207ENST00000430335 SART1O43290 800 aaKnown RBP21.08■□□□□ 0.97
CSNK1E-207ENST00000430335 MMEP08473 750 aa21.08■□□□□ 0.97
CSNK1E-207ENST00000430335 RALAP11233 206 aa21.08■□□□□ 0.97
CSNK1E-207ENST00000430335 RARGP13631 454 aa21.08■□□□□ 0.97
CSNK1E-207ENST00000430335 YWHAGP61981 247 aaKnown RBP eCLIP21.08■□□□□ 0.97
CSNK1E-207ENST00000430335 IRF2BP2Q7Z5L9 587 aa21.08■□□□□ 0.97
CSNK1E-207ENST00000430335 TADA2BQ86TJ2 420 aa21.08■□□□□ 0.97
CSNK1E-207ENST00000430335 GPIHBP1Q8IV16 184 aa21.08■□□□□ 0.97
CSNK1E-207ENST00000430335 C1orf131Q8NDD1 294 aaKnown RBP21.08■□□□□ 0.97
CSNK1E-207ENST00000430335 BPIFB1Q8TDL5 484 aa21.08■□□□□ 0.97
CSNK1E-207ENST00000430335 NUP210Q8TEM1 1887 aaPredicted RBP21.08■□□□□ 0.97
CSNK1E-207ENST00000430335 SLC20A1Q8WUM9 679 aa21.08■□□□□ 0.97
CSNK1E-207ENST00000430335 PPP1R13BQ96KQ4 1090 aa21.08■□□□□ 0.97
CSNK1E-207ENST00000430335 LRRC3BQ96PB8 259 aa21.08■□□□□ 0.97
CSNK1E-207ENST00000430335 TRMT61BQ9BVS5 477 aaKnown RBP21.08■□□□□ 0.97
CSNK1E-207ENST00000430335 NUCKS1Q9H1E3 243 aaKnown RBP21.08■□□□□ 0.97
CSNK1E-207ENST00000430335 AIPL1Q9NZN9 384 aa21.08■□□□□ 0.97
CSNK1E-207ENST00000430335 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.08■□□□□ 0.97
CSNK1E-207ENST00000430335 E5RJQ4 531 aa21.07■□□□□ 0.96
CSNK1E-207ENST00000430335 CHRNB2P17787 502 aa21.07■□□□□ 0.96
CSNK1E-207ENST00000430335 ATP5C1P36542 298 aaKnown RBP21.07■□□□□ 0.96
CSNK1E-207ENST00000430335 SNX16P57768 344 aa21.07■□□□□ 0.96
CSNK1E-207ENST00000430335 FMO1Q01740 532 aa21.07■□□□□ 0.96
CSNK1E-207ENST00000430335 ARID5AQ03989 594 aa21.07■□□□□ 0.96
CSNK1E-207ENST00000430335 USP4Q13107 963 aa21.07■□□□□ 0.96
CSNK1E-207ENST00000430335 TRIM72Q6ZMU5 477 aa21.07■□□□□ 0.96
CSNK1E-207ENST00000430335 KIAA1958Q8N8K9 716 aa21.07■□□□□ 0.96
CSNK1E-207ENST00000430335 NDRG1Q92597 394 aaKnown RBP21.07■□□□□ 0.96
CSNK1E-207ENST00000430335 EDAQ92838 391 aa21.07■□□□□ 0.96
CSNK1E-207ENST00000430335 CPXM1Q96SM3 734 aa21.07■□□□□ 0.96
CSNK1E-207ENST00000430335 CAPN11Q9UMQ6 739 aa21.07■□□□□ 0.96
CSNK1E-207ENST00000430335 CPQQ9Y646 472 aa21.07■□□□□ 0.96
CSNK1E-207ENST00000430335 YJEFN3A6XGL0 299 aa21.06■□□□□ 0.96
CSNK1E-207ENST00000430335 E7ENQ6 273 aa21.06■□□□□ 0.96
CSNK1E-207ENST00000430335 PIK3R2O00459 728 aa21.06■□□□□ 0.96
CSNK1E-207ENST00000430335 NARSO43776 548 aaKnown RBP21.06■□□□□ 0.96
CSNK1E-207ENST00000430335 CYP1A1P04798 512 aaPredicted RBP21.06■□□□□ 0.96
CSNK1E-207ENST00000430335 MBL2P11226 248 aaPredicted RBP21.06■□□□□ 0.96
CSNK1E-207ENST00000430335 NOMO3P69849 1222 aa21.06■□□□□ 0.96
CSNK1E-207ENST00000430335 GPC5P78333 572 aa21.06■□□□□ 0.96
CSNK1E-207ENST00000430335 ZNF77Q15935 545 aa21.06■□□□□ 0.96
CSNK1E-207ENST00000430335 PTPN20Q4JDL3 420 aa21.06■□□□□ 0.96
CSNK1E-207ENST00000430335 SFMBT2Q5VUG0 894 aa21.06■□□□□ 0.96
CSNK1E-207ENST00000430335 BSPRYQ5W0U4 402 aa21.06■□□□□ 0.96
CSNK1E-207ENST00000430335 SPECC1LQ69YQ0 1117 aa21.06■□□□□ 0.96
CSNK1E-207ENST00000430335 DDX42Q86XP3 938 aaKnown RBP eCLIP21.06■□□□□ 0.96
CSNK1E-207ENST00000430335 YAF2Q8IY57 180 aa21.06■□□□□ 0.96
CSNK1E-207ENST00000430335 ZNF397Q8NF99 534 aaPredicted RBP21.06■□□□□ 0.96
CSNK1E-207ENST00000430335 SH3RF2Q8TEC5 729 aa21.06■□□□□ 0.96
CSNK1E-207ENST00000430335 MIS12Q9H081 205 aa21.06■□□□□ 0.96
CSNK1E-207ENST00000430335 SMOC2Q9H3U7 446 aa21.06■□□□□ 0.96
CSNK1E-207ENST00000430335 ABCC13Q9NSE7 274 aa21.06■□□□□ 0.96
CSNK1E-207ENST00000430335 CHADO15335 359 aa21.05■□□□□ 0.96
CSNK1E-207ENST00000430335 PAPSS1O43252 624 aaPredicted RBP21.05■□□□□ 0.96
CSNK1E-207ENST00000430335 AP5Z1O43299 807 aa21.05■□□□□ 0.96
CSNK1E-207ENST00000430335 TBX18O95935 607 aa21.05■□□□□ 0.96
CSNK1E-207ENST00000430335 GYPCP04921 128 aa21.05■□□□□ 0.96
CSNK1E-207ENST00000430335 PRKCIP41743 596 aa21.05■□□□□ 0.96
CSNK1E-207ENST00000430335 ZBED6P86452 979 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms