RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 TAF4BQ92750 862 aa18.1■□□□□ 0.49
CPSF4-203ENST00000430038 NMUR1Q9HB89 426 aa18.1■□□□□ 0.49
CPSF4-203ENST00000430038 LRP3O75074 770 aa18.09■□□□□ 0.49
CPSF4-203ENST00000430038 ADAM9Q13443 819 aa18.09■□□□□ 0.49
CPSF4-203ENST00000430038 PLK5Q496M5 336 aa18.09■□□□□ 0.49
CPSF4-203ENST00000430038 CACNA2D4Q7Z3S7 1137 aa18.09■□□□□ 0.49
CPSF4-203ENST00000430038 FAM186BQ8IYM0 893 aa18.09■□□□□ 0.49
CPSF4-203ENST00000430038 FMR1NBQ8N0W7 255 aaPredicted RBP18.09■□□□□ 0.49
CPSF4-203ENST00000430038 JAKMIP2Q96AA8 810 aa18.09■□□□□ 0.49
CPSF4-203ENST00000430038 ZC3H10Q96K80 434 aaKnown RBP18.09■□□□□ 0.49
CPSF4-203ENST00000430038 HNRNPABQ99729 332 aaKnown RBP18.09■□□□□ 0.49
CPSF4-203ENST00000430038 SCAND2PQ9GZW5 306 aaPredicted RBP18.09■□□□□ 0.49
CPSF4-203ENST00000430038 NUDT5Q9UKK9 219 aa18.09■□□□□ 0.49
CPSF4-203ENST00000430038 TPRP12270 2363 aaKnown RBP18.09■□□□□ 0.49
CPSF4-203ENST00000430038 A0A0A0MRY4 1105 aa18.08■□□□□ 0.48
CPSF4-203ENST00000430038 E2F8A0AVK6 867 aa18.08■□□□□ 0.48
CPSF4-203ENST00000430038 CILPO75339 1184 aa18.08■□□□□ 0.48
CPSF4-203ENST00000430038 EPN2O95208 641 aa18.08■□□□□ 0.48
CPSF4-203ENST00000430038 CCDC192P0DO97 292 aa18.08■□□□□ 0.48
CPSF4-203ENST00000430038 KIR2DL1P43626 348 aaPredicted RBP18.08■□□□□ 0.48
CPSF4-203ENST00000430038 PMS1P54277 932 aaKnown RBP18.08■□□□□ 0.48
CPSF4-203ENST00000430038 PLA2G2CQ5R387 149 aa18.08■□□□□ 0.48
CPSF4-203ENST00000430038 TMEM25Q86YD3 366 aa18.08■□□□□ 0.48
CPSF4-203ENST00000430038 ETFBKMTQ8IXQ9 262 aa18.08■□□□□ 0.48
CPSF4-203ENST00000430038 KIAA1958Q8N8K9 716 aa18.08■□□□□ 0.48
CPSF4-203ENST00000430038 NAT16Q8N8M0 369 aa18.08■□□□□ 0.48
CPSF4-203ENST00000430038 PDZD8Q8NEN9 1154 aa18.08■□□□□ 0.48
CPSF4-203ENST00000430038 CYFIP2Q96F07 1278 aa18.08■□□□□ 0.48
CPSF4-203ENST00000430038 KLF16Q9BXK1 252 aaPredicted RBP18.08■□□□□ 0.48
CPSF4-203ENST00000430038 TPSD1Q9BZJ3 242 aa18.08■□□□□ 0.48
CPSF4-203ENST00000430038 EBF1Q9UH73 591 aa18.08■□□□□ 0.48
CPSF4-203ENST00000430038 CDV3Q9UKY7 258 aaKnown RBP18.08■□□□□ 0.48
CPSF4-203ENST00000430038 ATP8B3O60423 1300 aa18.07■□□□□ 0.48
CPSF4-203ENST00000430038 SGK1O00141 431 aa18.07■□□□□ 0.48
CPSF4-203ENST00000430038 MDM4O15151 490 aa18.07■□□□□ 0.48
CPSF4-203ENST00000430038 CYP26A1O43174 497 aa18.07■□□□□ 0.48
CPSF4-203ENST00000430038 IRF1P10914 325 aa18.07■□□□□ 0.48
CPSF4-203ENST00000430038 ADH5P11766 374 aa18.07■□□□□ 0.48
CPSF4-203ENST00000430038 P4HA1P13674 534 aa18.07■□□□□ 0.48
CPSF4-203ENST00000430038 CD58P19256 250 aa18.07■□□□□ 0.48
CPSF4-203ENST00000430038 PSMC2P35998 433 aaKnown RBP18.07■□□□□ 0.48
CPSF4-203ENST00000430038 PRCPP42785 496 aa18.07■□□□□ 0.48
CPSF4-203ENST00000430038 KDSRQ06136 332 aa18.07■□□□□ 0.48
CPSF4-203ENST00000430038 PPP1R26Q5T8A7 1209 aaPredicted RBP18.07■□□□□ 0.48
CPSF4-203ENST00000430038 TCEAL6Q6IPX3 200 aa18.07■□□□□ 0.48
CPSF4-203ENST00000430038 INTS8Q75QN2 995 aaKnown RBP18.07■□□□□ 0.48
CPSF4-203ENST00000430038 SCD5Q86SK9 330 aa18.07■□□□□ 0.48
CPSF4-203ENST00000430038 ALLCQ8N6M5 410 aa18.07■□□□□ 0.48
CPSF4-203ENST00000430038 FRMD1Q8N878 549 aa18.07■□□□□ 0.48
CPSF4-203ENST00000430038 IL17RCQ8NAC3 791 aa18.07■□□□□ 0.48
CPSF4-203ENST00000430038 ENGASEQ8NFI3 743 aa18.07■□□□□ 0.48
CPSF4-203ENST00000430038 TATDN2Q93075 761 aa18.07■□□□□ 0.48
CPSF4-203ENST00000430038 TCEAL3Q969E4 200 aa18.07■□□□□ 0.48
CPSF4-203ENST00000430038 PNKPQ96T60 521 aa18.07■□□□□ 0.48
CPSF4-203ENST00000430038 ARID3AQ99856 593 aa18.07■□□□□ 0.48
CPSF4-203ENST00000430038 COMMD8Q9NX08 183 aa18.07■□□□□ 0.48
CPSF4-203ENST00000430038 MMP17Q9ULZ9 603 aa18.07■□□□□ 0.48
CPSF4-203ENST00000430038 CEP192Q8TEP8 1941 aa18.07■□□□□ 0.48
CPSF4-203ENST00000430038 TNRC6BQ9UPQ9 1833 aaKnown RBP18.07■□□□□ 0.48
CPSF4-203ENST00000430038 SLC9A3R1O14745 358 aaPredicted RBP18.06■□□□□ 0.48
CPSF4-203ENST00000430038 SLC30A4O14863 429 aa18.06■□□□□ 0.48
CPSF4-203ENST00000430038 TLR5O60602 858 aa18.06■□□□□ 0.48
CPSF4-203ENST00000430038 ADAM23O75077 832 aa18.06■□□□□ 0.48
CPSF4-203ENST00000430038 KAT7O95251 611 aa18.06■□□□□ 0.48
CPSF4-203ENST00000430038 APBB3O95704 486 aa18.06■□□□□ 0.48
CPSF4-203ENST00000430038 ZNF806P0C7X5 589 aa18.06■□□□□ 0.48
CPSF4-203ENST00000430038 BCKDHBP21953 392 aa18.06■□□□□ 0.48
CPSF4-203ENST00000430038 TIE1P35590 1138 aa18.06■□□□□ 0.48
CPSF4-203ENST00000430038 TUBP50607 506 aa18.06■□□□□ 0.48
CPSF4-203ENST00000430038 DGKEP52429 567 aa18.06■□□□□ 0.48
CPSF4-203ENST00000430038 CRY1Q16526 586 aa18.06■□□□□ 0.48
CPSF4-203ENST00000430038 ZNF394Q53GI3 561 aa18.06■□□□□ 0.48
CPSF4-203ENST00000430038 RASSF3Q86WH2 238 aa18.06■□□□□ 0.48
CPSF4-203ENST00000430038 RTKNQ9BST9 563 aa18.06■□□□□ 0.48
CPSF4-203ENST00000430038 NIF3L1Q9GZT8 377 aa18.06■□□□□ 0.48
CPSF4-203ENST00000430038 TMEM8AQ9HCN3 771 aa18.06■□□□□ 0.48
CPSF4-203ENST00000430038 SCML2Q9UQR0 700 aa18.06■□□□□ 0.48
CPSF4-203ENST00000430038 PI4KAP42356 2102 aa18.05■□□□□ 0.48
CPSF4-203ENST00000430038 A0A1W2PQH9 124 aa18.05■□□□□ 0.48
CPSF4-203ENST00000430038 TM4SF5O14894 197 aa18.05■□□□□ 0.48
CPSF4-203ENST00000430038 FAM200BP0CF97 657 aa18.05■□□□□ 0.48
CPSF4-203ENST00000430038 ACO1P21399 889 aaKnown RBP18.05■□□□□ 0.48
CPSF4-203ENST00000430038 CBWD6Q4V339 395 aa18.05■□□□□ 0.48
CPSF4-203ENST00000430038 CBWD3Q5JTY5 395 aa18.05■□□□□ 0.48
CPSF4-203ENST00000430038 CBWD5Q5RIA9 395 aa18.05■□□□□ 0.48
CPSF4-203ENST00000430038 ANO7Q6IWH7 933 aa18.05■□□□□ 0.48
CPSF4-203ENST00000430038 DDX42Q86XP3 938 aaKnown RBP eCLIP18.05■□□□□ 0.48
CPSF4-203ENST00000430038 MIB1Q86YT6 1006 aa18.05■□□□□ 0.48
CPSF4-203ENST00000430038 TXNDC5Q8NBS9 432 aaKnown RBP18.05■□□□□ 0.48
CPSF4-203ENST00000430038 MDGA1Q8NFP4 955 aa18.05■□□□□ 0.48
CPSF4-203ENST00000430038 NETO1Q8TDF5 533 aa18.05■□□□□ 0.48
CPSF4-203ENST00000430038 ACDQ96AP0 544 aa18.05■□□□□ 0.48
CPSF4-203ENST00000430038 LOXL4Q96JB6 756 aa18.05■□□□□ 0.48
CPSF4-203ENST00000430038 NT5C1AQ9BXI3 368 aa18.05■□□□□ 0.48
CPSF4-203ENST00000430038 CYP3A43Q9HB55 503 aa18.05■□□□□ 0.48
CPSF4-203ENST00000430038 SPHK2Q9NRA0 654 aa18.05■□□□□ 0.48
CPSF4-203ENST00000430038 TBC1D14Q9P2M4 693 aa18.05■□□□□ 0.48
CPSF4-203ENST00000430038 PLXND1Q9Y4D7 1925 aa18.04■□□□□ 0.48
CPSF4-203ENST00000430038 TULP3O75386 442 aa18.04■□□□□ 0.48
CPSF4-203ENST00000430038 KIF20AO95235 890 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms