RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 ASMTLO95671 621 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 UBTFL6P0CB48 400 aaPredicted RBP8.38□□□□□ -1.07
HPS4-205ENST00000429411 IL1R2P27930 398 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 SDC4P31431 198 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 ABCG1P45844 678 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 PHKA2P46019 1235 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 KCTD2Q14681 263 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 KPNB1Q14974 876 aaKnown RBP8.38□□□□□ -1.07
HPS4-205ENST00000429411 PDK4Q16654 411 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 EML3Q32P44 896 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 C1orf146Q5VVC0 180 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 C16orf46Q6P387 395 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 TMEM154Q6P9G4 183 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 RFWD3Q6PCD5 774 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 CES3Q6UWW8 571 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 ABHD15Q6UXT9 468 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 BZW1Q7L1Q6 419 aaKnown RBP8.38□□□□□ -1.07
HPS4-205ENST00000429411 ACOT1Q86TX2 421 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 PHF13Q86YI8 300 aaPredicted RBP8.38□□□□□ -1.07
HPS4-205ENST00000429411 SCUBE3Q8IX30 993 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 RIBC1Q8N443 379 aaPredicted RBP8.38□□□□□ -1.07
HPS4-205ENST00000429411 POU5F2Q8N7G0 328 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 PAF1Q8N7H5 531 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 DNAJC9Q8WXX5 260 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 CPT1BQ92523 772 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 R3HDMLQ9H3Y0 253 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 ST6GALNAC4Q9H4F1 302 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 IL1RAPL1Q9NZN1 696 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 LAMA2P24043 3122 aaKnown RBP8.38□□□□□ -1.07
HPS4-205ENST00000429411 ARFGEF1Q9Y6D6 1849 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 A0A0B4J269 797 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 LRCH4O75427 683 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 ATP5HO75947 161 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 KRT36O76013 467 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 RGS20O76081 388 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 TMEM63AO94886 807 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 ZWINTO95229 277 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 NFICP08651 508 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 P4HA1P13674 534 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 ACO1P21399 889 aaKnown RBP8.38□□□□□ -1.07
HPS4-205ENST00000429411 KDELR1P24390 212 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 RBL1P28749 1068 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 RAB6CQ53S08 254 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 ALYREFQ86V81 257 aaKnown RBP8.38□□□□□ -1.07
HPS4-205ENST00000429411 CRLF3Q8IUI8 442 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 EFCAB3Q8N7B9 438 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 KIF12Q96FN5 646 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 KLC2Q9H0B6 622 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 RAB6CQ9H0N0 254 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 ARL8BQ9NVJ2 186 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 PCDH10Q9P2E7 1040 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 HMGXB4Q9UGU5 601 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 SHOC2Q9UQ13 582 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 LAMA3Q16787 3333 aa8.38□□□□□ -1.07
HPS4-205ENST00000429411 MYO18AQ92614 2054 aaKnown RBP8.37□□□□□ -1.07
HPS4-205ENST00000429411 E5RJQ4 531 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 CCDC22O60826 627 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 ASS1P00966 412 aaKnown RBP8.37□□□□□ -1.07
HPS4-205ENST00000429411 F7P08709 466 aaPredicted RBP8.37□□□□□ -1.07
HPS4-205ENST00000429411 ZCCHC18P0CG32 403 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 TXNP10599 105 aaKnown RBP8.37□□□□□ -1.07
HPS4-205ENST00000429411 PTPRAP18433 802 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 OSBPP22059 807 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 CDKN2BP42772 138 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 TFDP2Q14188 446 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 ZNF268Q14587 947 aaPredicted RBP8.37□□□□□ -1.07
HPS4-205ENST00000429411 HSDL1Q3SXM5 330 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 CCDC92Q53HC0 331 aaPredicted RBP8.37□□□□□ -1.07
HPS4-205ENST00000429411 CGB2Q6NT52 195 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 CRELD2Q6UXH1 353 aaPredicted RBP8.37□□□□□ -1.07
HPS4-205ENST00000429411 BRSK2Q8IWQ3 736 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 HACE1Q8IYU2 909 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 ARHGAP24Q8N264 748 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 DNAAF3Q8N9W5 541 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 IFT122Q9HBG6 1241 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 STOML1Q9UBI4 398 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 SFMBT1Q9UHJ3 866 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 PACSIN3Q9UKS6 424 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 INPP5FQ9Y2H2 1132 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 NVLO15381 856 aaKnown RBP8.37□□□□□ -1.07
HPS4-205ENST00000429411 OPHN1O60890 802 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 LUC7L3O95232 432 aaKnown RBP8.37□□□□□ -1.07
HPS4-205ENST00000429411 EDN1P05305 212 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 IRX1P78414 480 aaPredicted RBP8.37□□□□□ -1.07
HPS4-205ENST00000429411 PTPN11Q06124 597 aaPredicted RBP8.37□□□□□ -1.07
HPS4-205ENST00000429411 MCL1Q07820 350 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 AP1B1Q10567 949 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 KLF1Q13351 362 aaPredicted RBP8.37□□□□□ -1.07
HPS4-205ENST00000429411 DPYSL3Q14195 570 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 RNASEH2BQ5TBB1 312 aaKnown RBP8.37□□□□□ -1.07
HPS4-205ENST00000429411 RNF43Q68DV7 783 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 NXNQ6DKJ4 435 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 SDCCAG8Q86SQ7 713 aaPredicted RBP8.37□□□□□ -1.07
HPS4-205ENST00000429411 PRPF39Q86UA1 669 aaKnown RBP8.37□□□□□ -1.07
HPS4-205ENST00000429411 RDM1Q8NG50 284 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 HPDLQ96IR7 371 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 FBXL18Q96ME1 805 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 DENND2DQ9H6A0 471 aaPredicted RBP8.37□□□□□ -1.07
HPS4-205ENST00000429411 RNPEPL1Q9HAU8 725 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 ACSS2Q9NR19 701 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms